RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 NISCHQ9Y2I1 1504 aa50.61■■■■■ 5.69
SMIM29-208ENST00000495581 CCDC180Q9P1Z9 1646 aa44.94■■■■■ 4.79
SMIM29-208ENST00000495581 ABCC9O60706 1549 aa43.94■■■■■ 4.62
SMIM29-208ENST00000495581 DCAF8L2P0C7V8 631 aa42.35■■■■■ 4.37
SMIM29-208ENST00000495581 RB1CC1Q8TDY2 1594 aa42.31■■■■■ 4.36
SMIM29-208ENST00000495581 NACADO15069 1562 aa42.29■■■■■ 4.36
SMIM29-208ENST00000495581 ZCCHC6Q5VYS8 1495 aaKnown RBP42.15■■■■■ 4.34
SMIM29-208ENST00000495581 MYO15BQ96JP2 1530 aa42.07■■■■■ 4.33
SMIM29-208ENST00000495581 DCAF1Q9Y4B6 1507 aa41.9■■■■■ 4.3
SMIM29-208ENST00000495581 UNC13AQ9UPW8 1703 aa41.23■■■■■ 4.19
SMIM29-208ENST00000495581 PABPN1Q86U42 306 aaKnown RBP eCLIP41.1■■■■■ 4.17
SMIM29-208ENST00000495581 SCRIBQ14160 1630 aa41■■■■■ 4.15
SMIM29-208ENST00000495581 BICRAQ9NZM4 1560 aa40.95■■■■■ 4.15
SMIM29-208ENST00000495581 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
SMIM29-208ENST00000495581 DNAJC5BQ9UF47 199 aa40.25■■■■■ 4.03
SMIM29-208ENST00000495581 EIF4G1Q04637 1599 aaKnown RBP39.91■■■■□ 3.98
SMIM29-208ENST00000495581 CC2D2AQ9P2K1 1620 aa39.73■■■■□ 3.95
SMIM29-208ENST00000495581 CECR2Q9BXF3 1484 aa39.49■■■■□ 3.91
SMIM29-208ENST00000495581 BAZ1AQ9NRL2 1556 aaPredicted RBP39.24■■■■□ 3.87
SMIM29-208ENST00000495581 SMARCA4P51532 1647 aa39.23■■■■□ 3.87
SMIM29-208ENST00000495581 ATAD2BQ9ULI0 1458 aa39.04■■■■□ 3.84
SMIM29-208ENST00000495581 NCAPD3P42695 1498 aa39.03■■■■□ 3.84
SMIM29-208ENST00000495581 SMARCA2P51531 1590 aa39.02■■■■□ 3.84
SMIM29-208ENST00000495581 MROH2BQ7Z745 1585 aa38.97■■■■□ 3.83
SMIM29-208ENST00000495581 PEG3Q9GZU2 1588 aa38.86■■■■□ 3.81
SMIM29-208ENST00000495581 HMGXB3Q12766 1538 aa38.81■■■■□ 3.8
SMIM29-208ENST00000495581 BAZ1BQ9UIG0 1483 aaKnown RBP38.74■■■■□ 3.79
SMIM29-208ENST00000495581 RSF1Q96T23 1441 aaPredicted RBP38.58■■■■□ 3.77
SMIM29-208ENST00000495581 WIZO95785 1651 aa38.53■■■■□ 3.76
SMIM29-208ENST00000495581 TOP2AP11388 1531 aaKnown RBP38.17■■■■□ 3.7
SMIM29-208ENST00000495581 NESP48681 1621 aa38■■■■□ 3.67
SMIM29-208ENST00000495581 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
SMIM29-208ENST00000495581 ERCC6Q03468 1493 aa37.92■■■■□ 3.66
SMIM29-208ENST00000495581 CADPSQ9ULU8 1353 aa37.91■■■■□ 3.66
SMIM29-208ENST00000495581 PDS5BQ9NTI5 1447 aa37.78■■■■□ 3.64
SMIM29-208ENST00000495581 CCDC88BA6NC98 1476 aa37.74■■■■□ 3.63
SMIM29-208ENST00000495581 SUPT5HO00267 1087 aaKnown RBP37.7■■■■□ 3.63
SMIM29-208ENST00000495581 CFTRP13569 1480 aa37.67■■■■□ 3.62
SMIM29-208ENST00000495581 KIF21AQ7Z4S6 1674 aa37.53■■■■□ 3.6
SMIM29-208ENST00000495581 CUX2O14529 1486 aa37.48■■■■□ 3.59
SMIM29-208ENST00000495581 FANCD2Q9BXW9 1451 aa37.45■■■■□ 3.59
SMIM29-208ENST00000495581 CEP164Q9UPV0 1460 aa37.4■■■■□ 3.58
SMIM29-208ENST00000495581 THOC2Q8NI27 1593 aaKnown RBP37.4■■■■□ 3.58
SMIM29-208ENST00000495581 MRC2Q9UBG0 1479 aa37.33■■■■□ 3.57
SMIM29-208ENST00000495581 PRDM2Q13029 1718 aa37.31■■■■□ 3.56
SMIM29-208ENST00000495581 WDR62O43379 1518 aa37.18■■■■□ 3.54
SMIM29-208ENST00000495581 URB2Q14146 1524 aaKnown RBP37.03■■■■□ 3.52
SMIM29-208ENST00000495581 ABCC8Q09428 1581 aa36.91■■■■□ 3.5
SMIM29-208ENST00000495581 TOPBP1Q92547 1522 aa36.84■■■■□ 3.49
SMIM29-208ENST00000495581 DNMBPQ6XZF7 1577 aa36.8■■■■□ 3.48
SMIM29-208ENST00000495581 IFT140Q96RY7 1462 aa36.63■■■■□ 3.45
SMIM29-208ENST00000495581 CUX1P39880 1505 aa36.56■■■■□ 3.44
SMIM29-208ENST00000495581 POLA1P09884 1462 aaPredicted RBP36.52■■■■□ 3.44
SMIM29-208ENST00000495581 FGD5Q6ZNL6 1462 aa36.45■■■■□ 3.43
SMIM29-208ENST00000495581 SOGA1O94964 1423 aa36.43■■■■□ 3.42
SMIM29-208ENST00000495581 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
SMIM29-208ENST00000495581 TARBP1Q13395 1621 aaKnown RBP36.4■■■■□ 3.42
SMIM29-208ENST00000495581 ZNF608Q9ULD9 1512 aaPredicted RBP36.39■■■■□ 3.42
SMIM29-208ENST00000495581 RAD54L2Q9Y4B4 1467 aa36.36■■■■□ 3.41
SMIM29-208ENST00000495581 DNAJC5Q9H3Z4 198 aa36.32■■■■□ 3.4
SMIM29-208ENST00000495581 TOP2BQ02880 1626 aa36.28■■■■□ 3.4
SMIM29-208ENST00000495581 EIF4G3O43432 1585 aaKnown RBP36.25■■■■□ 3.39
SMIM29-208ENST00000495581 BIVM-ERCC5R4GMW8 1640 aa36.25■■■■□ 3.39
SMIM29-208ENST00000495581 SYNJ1O43426 1573 aa36.24■■■■□ 3.39
SMIM29-208ENST00000495581 AQRO60306 1485 aaKnown RBP eCLIP36.24■■■■□ 3.392e-7■■■■■ 56.2
SMIM29-208ENST00000495581 TDRD9Q8NDG6 1382 aaKnown RBP36.19■■■■□ 3.38
SMIM29-208ENST00000495581 WDR97A6NE52 1622 aa36.18■■■■□ 3.38
SMIM29-208ENST00000495581 ABCA10Q8WWZ4 1543 aa36.12■■■■□ 3.37
SMIM29-208ENST00000495581 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
SMIM29-208ENST00000495581 GAPVD1Q14C86 1478 aa35.99■■■■□ 3.35
SMIM29-208ENST00000495581 GRIN2BQ13224 1484 aa35.99■■■■□ 3.35
SMIM29-208ENST00000495581 ABCA5Q8WWZ7 1642 aa35.92■■■■□ 3.34
SMIM29-208ENST00000495581 SNAPC4Q5SXM2 1469 aa35.89■■■■□ 3.34
SMIM29-208ENST00000495581 MAGI1Q96QZ7 1491 aaPredicted RBP35.89■■■■□ 3.34
SMIM29-208ENST00000495581 FBLN2P98095 1184 aa35.86■■■■□ 3.33
SMIM29-208ENST00000495581 PBRM1Q86U86 1689 aa35.83■■■■□ 3.33
SMIM29-208ENST00000495581 CHMP7Q8WUX9 453 aaPredicted RBP35.79■■■■□ 3.32
SMIM29-208ENST00000495581 CHD1O14646 1710 aa35.76■■■■□ 3.31
SMIM29-208ENST00000495581 SYNJ2O15056 1496 aa35.74■■■■□ 3.31
SMIM29-208ENST00000495581 ERICH3Q5RHP9 1530 aa35.69■■■■□ 3.3
SMIM29-208ENST00000495581 KIF27Q86VH2 1401 aa35.67■■■■□ 3.3
SMIM29-208ENST00000495581 TRIM41Q8WV44 630 aa35.65■■■■□ 3.3
SMIM29-208ENST00000495581 FHAD1B1AJZ9 1412 aa35.59■■■■□ 3.29
SMIM29-208ENST00000495581 ADAMTS12P58397 1594 aa35.58■■■■□ 3.29
SMIM29-208ENST00000495581 GRIN2AQ12879 1464 aa35.5■■■■□ 3.27
SMIM29-208ENST00000495581 IGF1RP08069 1367 aa35.5■■■■□ 3.27
SMIM29-208ENST00000495581 CLASP1Q7Z460 1538 aa35.4■■■■□ 3.26
SMIM29-208ENST00000495581 CUL7Q14999 1698 aa35.37■■■■□ 3.25
SMIM29-208ENST00000495581 NUP160Q12769 1436 aa35.34■■■■□ 3.25
SMIM29-208ENST00000495581 ARHGEF11O15085 1522 aa35.32■■■■□ 3.24
SMIM29-208ENST00000495581 CARMIL1Q5VZK9 1371 aa35.3■■■■□ 3.24
SMIM29-208ENST00000495581 RIMBP3CA6NJZ7 1639 aa35.29■■■■□ 3.24
SMIM29-208ENST00000495581 RIMBP3BA6NNM3 1639 aa35.29■■■■□ 3.24
SMIM29-208ENST00000495581 RIMBP3Q9UFD9 1639 aa35.29■■■■□ 3.24
SMIM29-208ENST00000495581 CEP170Q5SW79 1584 aa35.27■■■■□ 3.24
SMIM29-208ENST00000495581 RUSC2Q8N2Y8 1516 aa35.27■■■■□ 3.24
SMIM29-208ENST00000495581 CHIC1Q5VXU3 224 aa35.2■■■■□ 3.23
SMIM29-208ENST00000495581 RAPGEF2Q9Y4G8 1499 aa35.09■■■■□ 3.21
SMIM29-208ENST00000495581 CYB5RLQ6IPT4 315 aa35.06■■■■□ 3.2
SMIM29-208ENST00000495581 KIAA0586Q9BVV6 1533 aa35.05■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms