RNA–Protein interactions for RNA: ENST00000495546.1

C2orf88-209, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 387 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-209ENST00000495546 NISCHQ9Y2I1 1504 aa37.26■■■■□ 3.55
C2orf88-209ENST00000495546 CCDC180Q9P1Z9 1646 aa33.01■■■□□ 2.87
C2orf88-209ENST00000495546 ABCC9O60706 1549 aa32.03■■■□□ 2.72
C2orf88-209ENST00000495546 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
C2orf88-209ENST00000495546 NACADO15069 1562 aa30.97■■■□□ 2.55
C2orf88-209ENST00000495546 MYO15BQ96JP2 1530 aa30.93■■■□□ 2.54
C2orf88-209ENST00000495546 RB1CC1Q8TDY2 1594 aa30.93■■■□□ 2.54
C2orf88-209ENST00000495546 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
C2orf88-209ENST00000495546 DCAF8L2P0C7V8 631 aa30.87■■■□□ 2.53
C2orf88-209ENST00000495546 UNC13AQ9UPW8 1703 aa30.23■■■□□ 2.43
C2orf88-209ENST00000495546 SCRIBQ14160 1630 aa30.09■■■□□ 2.41
C2orf88-209ENST00000495546 BICRAQ9NZM4 1560 aa30.04■■■□□ 2.4
C2orf88-209ENST00000495546 PABPN1Q86U42 306 aaKnown RBP eCLIP29.95■■■□□ 2.39
C2orf88-209ENST00000495546 SHROOM4Q9ULL8 1493 aa29.76■■■□□ 2.35
C2orf88-209ENST00000495546 DNAJC5BQ9UF47 199 aa29.22■■■□□ 2.27
C2orf88-209ENST00000495546 EIF4G1Q04637 1599 aaKnown RBP29.2■■■□□ 2.26
C2orf88-209ENST00000495546 CC2D2AQ9P2K1 1620 aa29■■■□□ 2.23
C2orf88-209ENST00000495546 CECR2Q9BXF3 1484 aa28.99■■■□□ 2.23
C2orf88-209ENST00000495546 BAZ1AQ9NRL2 1556 aaPredicted RBP28.84■■■□□ 2.21
C2orf88-209ENST00000495546 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
C2orf88-209ENST00000495546 MROH2BQ7Z745 1585 aa28.71■■■□□ 2.19
C2orf88-209ENST00000495546 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
C2orf88-209ENST00000495546 PEG3Q9GZU2 1588 aa28.62■■■□□ 2.17
C2orf88-209ENST00000495546 NCAPD3P42695 1498 aa28.61■■■□□ 2.17
C2orf88-209ENST00000495546 SMARCA2P51531 1590 aa28.59■■■□□ 2.17
C2orf88-209ENST00000495546 HMGXB3Q12766 1538 aa28.48■■■□□ 2.15
C2orf88-209ENST00000495546 RSF1Q96T23 1441 aaPredicted RBP28.48■■■□□ 2.15
C2orf88-209ENST00000495546 BAZ1BQ9UIG0 1483 aaKnown RBP28.39■■■□□ 2.13
C2orf88-209ENST00000495546 WIZO95785 1651 aa28.38■■■□□ 2.13
C2orf88-209ENST00000495546 TOP2AP11388 1531 aaKnown RBP28.13■■■□□ 2.09
C2orf88-209ENST00000495546 SUPT5HO00267 1087 aaKnown RBP27.82■■■□□ 2.04
C2orf88-209ENST00000495546 NESP48681 1621 aa27.81■■■□□ 2.04
C2orf88-209ENST00000495546 CCDC88BA6NC98 1476 aa27.79■■■□□ 2.04
C2orf88-209ENST00000495546 LAMC3Q9Y6N6 1575 aa27.77■■■□□ 2.04
C2orf88-209ENST00000495546 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
C2orf88-209ENST00000495546 CFTRP13569 1480 aa27.67■■■□□ 2.02
C2orf88-209ENST00000495546 PDS5BQ9NTI5 1447 aa27.57■■■□□ 2
C2orf88-209ENST00000495546 ERCC6Q03468 1493 aa27.55■■■□□ 2
C2orf88-209ENST00000495546 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
C2orf88-209ENST00000495546 FANCD2Q9BXW9 1451 aa27.43■■□□□ 1.98
C2orf88-209ENST00000495546 PRDM2Q13029 1718 aa27.42■■□□□ 1.98
C2orf88-209ENST00000495546 THOC2Q8NI27 1593 aaKnown RBP27.36■■□□□ 1.97
C2orf88-209ENST00000495546 CEP164Q9UPV0 1460 aa27.36■■□□□ 1.97
C2orf88-209ENST00000495546 MRC2Q9UBG0 1479 aa27.29■■□□□ 1.96
C2orf88-209ENST00000495546 CUX2O14529 1486 aa27.24■■□□□ 1.95
C2orf88-209ENST00000495546 WDR62O43379 1518 aa27.21■■□□□ 1.95
C2orf88-209ENST00000495546 URB2Q14146 1524 aaKnown RBP27.16■■□□□ 1.94
C2orf88-209ENST00000495546 TOPBP1Q92547 1522 aa27.03■■□□□ 1.92
C2orf88-209ENST00000495546 ABCC8Q09428 1581 aa27.02■■□□□ 1.92
C2orf88-209ENST00000495546 DNMBPQ6XZF7 1577 aa27.01■■□□□ 1.92
C2orf88-209ENST00000495546 CUX1P39880 1505 aa26.92■■□□□ 1.9
C2orf88-209ENST00000495546 POLA1P09884 1462 aaPredicted RBP26.82■■□□□ 1.88
C2orf88-209ENST00000495546 WRNQ14191 1432 aaPredicted RBP eCLIP26.82■■□□□ 1.88
C2orf88-209ENST00000495546 IFT140Q96RY7 1462 aa26.79■■□□□ 1.88
C2orf88-209ENST00000495546 FGD5Q6ZNL6 1462 aa26.78■■□□□ 1.88
C2orf88-209ENST00000495546 SYNJ1O43426 1573 aa26.75■■□□□ 1.87
C2orf88-209ENST00000495546 TOP2BQ02880 1626 aa26.75■■□□□ 1.87
C2orf88-209ENST00000495546 BIVM-ERCC5R4GMW8 1640 aa26.75■■□□□ 1.87
C2orf88-209ENST00000495546 TARBP1Q13395 1621 aaKnown RBP26.73■■□□□ 1.87
C2orf88-209ENST00000495546 RAD54L2Q9Y4B4 1467 aa26.68■■□□□ 1.86
C2orf88-209ENST00000495546 SOGA1O94964 1423 aa26.68■■□□□ 1.86
C2orf88-209ENST00000495546 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
C2orf88-209ENST00000495546 WDR97A6NE52 1622 aa26.56■■□□□ 1.84
C2orf88-209ENST00000495546 ABCA10Q8WWZ4 1543 aa26.55■■□□□ 1.84
C2orf88-209ENST00000495546 EIF4G3O43432 1585 aaKnown RBP26.55■■□□□ 1.84
C2orf88-209ENST00000495546 AQRO60306 1485 aaKnown RBP eCLIP26.52■■□□□ 1.84
C2orf88-209ENST00000495546 TDRD9Q8NDG6 1382 aaKnown RBP26.5■■□□□ 1.83
C2orf88-209ENST00000495546 ABCA5Q8WWZ7 1642 aa26.43■■□□□ 1.82
C2orf88-209ENST00000495546 GAPVD1Q14C86 1478 aa26.38■■□□□ 1.81
C2orf88-209ENST00000495546 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
C2orf88-209ENST00000495546 PBRM1Q86U86 1689 aa26.3■■□□□ 1.8
C2orf88-209ENST00000495546 TRIM41Q8WV44 630 aa26.28■■□□□ 1.8
C2orf88-209ENST00000495546 SNAPC4Q5SXM2 1469 aa26.28■■□□□ 1.8
C2orf88-209ENST00000495546 MAGI1Q96QZ7 1491 aaPredicted RBP26.27■■□□□ 1.8
C2orf88-209ENST00000495546 ERICH3Q5RHP9 1530 aa26.23■■□□□ 1.79
C2orf88-209ENST00000495546 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
C2orf88-209ENST00000495546 CHIC1Q5VXU3 224 aa26.18■■□□□ 1.78
C2orf88-209ENST00000495546 SYNJ2O15056 1496 aa26.17■■□□□ 1.78
C2orf88-209ENST00000495546 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
C2orf88-209ENST00000495546 CHD1O14646 1710 aa26.14■■□□□ 1.78
C2orf88-209ENST00000495546 IGF1RP08069 1367 aa26.12■■□□□ 1.77
C2orf88-209ENST00000495546 DNAJC5Q9H3Z4 198 aa26.12■■□□□ 1.77
C2orf88-209ENST00000495546 OSCARQ8IYS5 282 aa26.11■■□□□ 1.77
C2orf88-209ENST00000495546 FHAD1B1AJZ9 1412 aa26.1■■□□□ 1.77
C2orf88-209ENST00000495546 RUSC2Q8N2Y8 1516 aa26.09■■□□□ 1.77
C2orf88-209ENST00000495546 CHMP7Q8WUX9 453 aaPredicted RBP26.07■■□□□ 1.76
C2orf88-209ENST00000495546 FBLN2P98095 1184 aa26.06■■□□□ 1.76
C2orf88-209ENST00000495546 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
C2orf88-209ENST00000495546 CUL7Q14999 1698 aa26.02■■□□□ 1.76
C2orf88-209ENST00000495546 CARMIL1Q5VZK9 1371 aa25.95■■□□□ 1.74
C2orf88-209ENST00000495546 NUP160Q12769 1436 aa25.93■■□□□ 1.74
C2orf88-209ENST00000495546 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
C2orf88-209ENST00000495546 EEA1Q15075 1411 aa25.89■■□□□ 1.74
C2orf88-209ENST00000495546 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
C2orf88-209ENST00000495546 PRXQ9BXM0 1461 aa25.84■■□□□ 1.73
C2orf88-209ENST00000495546 RAPGEF2Q9Y4G8 1499 aa25.82■■□□□ 1.72
C2orf88-209ENST00000495546 CSRNP3Q8WYN3 585 aa25.8■■□□□ 1.72
C2orf88-209ENST00000495546 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
C2orf88-209ENST00000495546 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
C2orf88-209ENST00000495546 SHROOM2Q13796 1616 aa25.7■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms