RNA–Protein interactions for RNA: ENST00000495540.1

PROM2-210, Transcript of prominin 2, humanhuman

TSL 3

Gene PROM2, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM2-210ENST00000495540 NISCHQ9Y2I1 1504 aa31.51■■■□□ 2.63
PROM2-210ENST00000495540 CCDC180Q9P1Z9 1646 aa27.3■■□□□ 1.96
PROM2-210ENST00000495540 ZCCHC6Q5VYS8 1495 aaKnown RBP26.55■■□□□ 1.84
PROM2-210ENST00000495540 DCAF1Q9Y4B6 1507 aa26.09■■□□□ 1.77
PROM2-210ENST00000495540 SHROOM4Q9ULL8 1493 aa25.97■■□□□ 1.75
PROM2-210ENST00000495540 DCAF8L2P0C7V8 631 aa25.88■■□□□ 1.73
PROM2-210ENST00000495540 MYO15BQ96JP2 1530 aa25.63■■□□□ 1.69
PROM2-210ENST00000495540 ABCC9O60706 1549 aa25.37■■□□□ 1.65
PROM2-210ENST00000495540 NACADO15069 1562 aa25.34■■□□□ 1.65
PROM2-210ENST00000495540 SUPT5HO00267 1087 aaKnown RBP25.24■■□□□ 1.63
PROM2-210ENST00000495540 SCRIBQ14160 1630 aa25.12■■□□□ 1.61
PROM2-210ENST00000495540 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
PROM2-210ENST00000495540 RSF1Q96T23 1441 aaPredicted RBP24.61■■□□□ 1.53
PROM2-210ENST00000495540 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
PROM2-210ENST00000495540 CHIC1Q5VXU3 224 aa24.42■■□□□ 1.5
PROM2-210ENST00000495540 CECR2Q9BXF3 1484 aa24.41■■□□□ 1.5
PROM2-210ENST00000495540 MROH2BQ7Z745 1585 aa24.33■■□□□ 1.49
PROM2-210ENST00000495540 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
PROM2-210ENST00000495540 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.46
PROM2-210ENST00000495540 WIZO95785 1651 aa24.17■■□□□ 1.46
PROM2-210ENST00000495540 SMARCA4P51532 1647 aa24.13■■□□□ 1.45
PROM2-210ENST00000495540 PABPN1Q86U42 306 aaKnown RBP eCLIP24.02■■□□□ 1.44
PROM2-210ENST00000495540 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
PROM2-210ENST00000495540 PEG3Q9GZU2 1588 aa23.82■■□□□ 1.4
PROM2-210ENST00000495540 TRIM41Q8WV44 630 aa23.74■■□□□ 1.39
PROM2-210ENST00000495540 SMARCA2P51531 1590 aa23.74■■□□□ 1.39
PROM2-210ENST00000495540 CCDC88BA6NC98 1476 aa23.71■■□□□ 1.39
PROM2-210ENST00000495540 EIF4G1Q04637 1599 aaKnown RBP23.69■■□□□ 1.38
PROM2-210ENST00000495540 ATAD2BQ9ULI0 1458 aa23.62■■□□□ 1.37
PROM2-210ENST00000495540 BAZ1BQ9UIG0 1483 aaKnown RBP23.53■■□□□ 1.36
PROM2-210ENST00000495540 DNAJC5BQ9UF47 199 aa23.52■■□□□ 1.36
PROM2-210ENST00000495540 LOC105371045A0A1W2PR82 267 aa23.46■■□□□ 1.35
PROM2-210ENST00000495540 HMGXB3Q12766 1538 aa23.37■■□□□ 1.33
PROM2-210ENST00000495540 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
PROM2-210ENST00000495540 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
PROM2-210ENST00000495540 FAM9AQ8IZU1 332 aaPredicted RBP23.27■■□□□ 1.32
PROM2-210ENST00000495540 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
PROM2-210ENST00000495540 EEA1Q15075 1411 aa23.13■■□□□ 1.29
PROM2-210ENST00000495540 SYNJ1O43426 1573 aa23.01■■□□□ 1.27
PROM2-210ENST00000495540 CC2D2AQ9P2K1 1620 aa22.99■■□□□ 1.27
PROM2-210ENST00000495540 SOGA1O94964 1423 aa22.98■■□□□ 1.27
PROM2-210ENST00000495540 CFTRP13569 1480 aa22.95■■□□□ 1.26
PROM2-210ENST00000495540 CSRNP3Q8WYN3 585 aa22.93■■□□□ 1.26
PROM2-210ENST00000495540 TOP2BQ02880 1626 aa22.93■■□□□ 1.26
PROM2-210ENST00000495540 BIVM-ERCC5R4GMW8 1640 aa22.9■■□□□ 1.26
PROM2-210ENST00000495540 PRDM2Q13029 1718 aa22.9■■□□□ 1.26
PROM2-210ENST00000495540 EHMT2Q96KQ7 1210 aa22.89■■□□□ 1.25
PROM2-210ENST00000495540 PCGF6Q9BYE7 350 aa22.86■■□□□ 1.25
PROM2-210ENST00000495540 RUSC2Q8N2Y8 1516 aa22.86■■□□□ 1.25
PROM2-210ENST00000495540 TNIKQ9UKE5 1360 aa22.82■■□□□ 1.24
PROM2-210ENST00000495540 TRIM26Q12899 539 aaPredicted RBP22.82■■□□□ 1.24
PROM2-210ENST00000495540 CADPSQ9ULU8 1353 aa22.8■■□□□ 1.24
PROM2-210ENST00000495540 GOLGA3Q08378 1498 aa22.79■■□□□ 1.24
PROM2-210ENST00000495540 KIF21BO75037 1637 aa22.76■■□□□ 1.23
PROM2-210ENST00000495540 CEP164Q9UPV0 1460 aa22.75■■□□□ 1.23
PROM2-210ENST00000495540 CUX1P39880 1505 aa22.73■■□□□ 1.23
PROM2-210ENST00000495540 CEP162Q5TB80 1403 aa22.67■■□□□ 1.22
PROM2-210ENST00000495540 UBTFP17480 764 aaKnown RBP22.67■■□□□ 1.22
PROM2-210ENST00000495540 HRCP23327 699 aa22.61■■□□□ 1.21
PROM2-210ENST00000495540 KIF27Q86VH2 1401 aa22.56■■□□□ 1.2
PROM2-210ENST00000495540 FANCD2Q9BXW9 1451 aa22.54■■□□□ 1.2
PROM2-210ENST00000495540 ERICH3Q5RHP9 1530 aa22.52■■□□□ 1.2
PROM2-210ENST00000495540 LAMC3Q9Y6N6 1575 aa22.5■■□□□ 1.19
PROM2-210ENST00000495540 PRXQ9BXM0 1461 aa22.49■■□□□ 1.19
PROM2-210ENST00000495540 RAPGEF2Q9Y4G8 1499 aa22.49■■□□□ 1.19
PROM2-210ENST00000495540 DNMBPQ6XZF7 1577 aa22.43■■□□□ 1.18
PROM2-210ENST00000495540 FGD5Q6ZNL6 1462 aa22.43■■□□□ 1.18
PROM2-210ENST00000495540 CLIP1P30622 1438 aa22.42■■□□□ 1.18
PROM2-210ENST00000495540 NESP48681 1621 aa22.4■■□□□ 1.18
PROM2-210ENST00000495540 CUX2O14529 1486 aa22.38■■□□□ 1.17
PROM2-210ENST00000495540 TOPBP1Q92547 1522 aa22.34■■□□□ 1.17
PROM2-210ENST00000495540 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
PROM2-210ENST00000495540 PPARGC1BQ86YN6 1023 aaKnown RBP22.3■■□□□ 1.16
PROM2-210ENST00000495540 IGF1RP08069 1367 aa22.29■■□□□ 1.16
PROM2-210ENST00000495540 VPS8Q8N3P4 1428 aa22.29■■□□□ 1.16
PROM2-210ENST00000495540 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
PROM2-210ENST00000495540 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
PROM2-210ENST00000495540 ZEB1P37275 1124 aaPredicted RBP22.22■■□□□ 1.15
PROM2-210ENST00000495540 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
PROM2-210ENST00000495540 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
PROM2-210ENST00000495540 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
PROM2-210ENST00000495540 KIF21AQ7Z4S6 1674 aa22.16■■□□□ 1.14
PROM2-210ENST00000495540 APLP2Q06481 763 aa22.15■■□□□ 1.14
PROM2-210ENST00000495540 WDR97A6NE52 1622 aa22.13■■□□□ 1.13
PROM2-210ENST00000495540 ARAP1Q96P48 1450 aa22.13■■□□□ 1.13
PROM2-210ENST00000495540 CUL7Q14999 1698 aa22.11■■□□□ 1.13
PROM2-210ENST00000495540 RANGAP1P46060 587 aaPredicted RBP22.1■■□□□ 1.13
PROM2-210ENST00000495540 ARHGAP35Q9NRY4 1499 aa22.04■■□□□ 1.12
PROM2-210ENST00000495540 TTBK1Q5TCY1 1321 aaPredicted RBP22.03■■□□□ 1.12
PROM2-210ENST00000495540 ABCA5Q8WWZ7 1642 aa22.02■■□□□ 1.12
PROM2-210ENST00000495540 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
PROM2-210ENST00000495540 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
PROM2-210ENST00000495540 TARBP1Q13395 1621 aaKnown RBP21.96■■□□□ 1.11
PROM2-210ENST00000495540 TDRD9Q8NDG6 1382 aaKnown RBP21.92■■□□□ 1.1
PROM2-210ENST00000495540 CTTNBP2Q8WZ74 1663 aa21.91■■□□□ 1.1
PROM2-210ENST00000495540 EFCAB5A4FU69 1503 aa21.88■■□□□ 1.09
PROM2-210ENST00000495540 MAP3K1Q13233 1512 aa21.87■■□□□ 1.09
PROM2-210ENST00000495540 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
PROM2-210ENST00000495540 WDR62O43379 1518 aa21.85■■□□□ 1.09
PROM2-210ENST00000495540 CCER1Q8TC90 406 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms