RNA–Protein interactions for RNA: ENST00000495532.1

HLA-DOA-206, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

Gene HLA-DOA, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-206ENST00000495532 NISCHQ9Y2I1 1504 aa29.37■■■□□ 2.29
HLA-DOA-206ENST00000495532 ABCC9O60706 1549 aa27.18■■□□□ 1.94
HLA-DOA-206ENST00000495532 CCDC180Q9P1Z9 1646 aa26.67■■□□□ 1.86
HLA-DOA-206ENST00000495532 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
HLA-DOA-206ENST00000495532 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
HLA-DOA-206ENST00000495532 NACADO15069 1562 aa25.31■■□□□ 1.64
HLA-DOA-206ENST00000495532 PABPN1Q86U42 306 aaKnown RBP eCLIP25.16■■□□□ 1.62
HLA-DOA-206ENST00000495532 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
HLA-DOA-206ENST00000495532 BICRAQ9NZM4 1560 aa24.96■■□□□ 1.59
HLA-DOA-206ENST00000495532 DCAF8L2P0C7V8 631 aa24.9■■□□□ 1.58
HLA-DOA-206ENST00000495532 MYO15BQ96JP2 1530 aa24.77■■□□□ 1.56
HLA-DOA-206ENST00000495532 CC2D2AQ9P2K1 1620 aa24.57■■□□□ 1.52
HLA-DOA-206ENST00000495532 CECR2Q9BXF3 1484 aa24.55■■□□□ 1.52
HLA-DOA-206ENST00000495532 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
HLA-DOA-206ENST00000495532 EIF4G1Q04637 1599 aaKnown RBP24.37■■□□□ 1.49
HLA-DOA-206ENST00000495532 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
HLA-DOA-206ENST00000495532 DCAF1Q9Y4B6 1507 aa24.24■■□□□ 1.47
HLA-DOA-206ENST00000495532 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
HLA-DOA-206ENST00000495532 SCRIBQ14160 1630 aa24.22■■□□□ 1.47
HLA-DOA-206ENST00000495532 CUX2O14529 1486 aa23.68■■□□□ 1.38
HLA-DOA-206ENST00000495532 ERCC6Q03468 1493 aa23.48■■□□□ 1.35
HLA-DOA-206ENST00000495532 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
HLA-DOA-206ENST00000495532 ATAD2BQ9ULI0 1458 aa23.21■■□□□ 1.31
HLA-DOA-206ENST00000495532 NESP48681 1621 aa23.2■■□□□ 1.3
HLA-DOA-206ENST00000495532 HMGXB3Q12766 1538 aa23.17■■□□□ 1.3
HLA-DOA-206ENST00000495532 THOC2Q8NI27 1593 aaKnown RBP23.14■■□□□ 1.29
HLA-DOA-206ENST00000495532 SMARCA2P51531 1590 aa23.11■■□□□ 1.29
HLA-DOA-206ENST00000495532 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
HLA-DOA-206ENST00000495532 TRIM41Q8WV44 630 aa22.96■■□□□ 1.27
HLA-DOA-206ENST00000495532 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
HLA-DOA-206ENST00000495532 KIF21AQ7Z4S6 1674 aa22.93■■□□□ 1.26
HLA-DOA-206ENST00000495532 BAZ1BQ9UIG0 1483 aaKnown RBP22.93■■□□□ 1.26
HLA-DOA-206ENST00000495532 PEG3Q9GZU2 1588 aa22.86■■□□□ 1.25
HLA-DOA-206ENST00000495532 BAZ1AQ9NRL2 1556 aaPredicted RBP22.83■■□□□ 1.25
HLA-DOA-206ENST00000495532 PDS5BQ9NTI5 1447 aa22.77■■□□□ 1.24
HLA-DOA-206ENST00000495532 WDR62O43379 1518 aa22.66■■□□□ 1.22
HLA-DOA-206ENST00000495532 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
HLA-DOA-206ENST00000495532 MROH2BQ7Z745 1585 aa22.63■■□□□ 1.21
HLA-DOA-206ENST00000495532 CADPSQ9ULU8 1353 aa22.59■■□□□ 1.21
HLA-DOA-206ENST00000495532 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
HLA-DOA-206ENST00000495532 OSCARQ8IYS5 282 aa22.43■■□□□ 1.18
HLA-DOA-206ENST00000495532 FANCD2Q9BXW9 1451 aa22.36■■□□□ 1.17
HLA-DOA-206ENST00000495532 WIZO95785 1651 aa22.35■■□□□ 1.17
HLA-DOA-206ENST00000495532 RIMBP3CA6NJZ7 1639 aa22.31■■□□□ 1.16
HLA-DOA-206ENST00000495532 RIMBP3BA6NNM3 1639 aa22.31■■□□□ 1.16
HLA-DOA-206ENST00000495532 RIMBP3Q9UFD9 1639 aa22.31■■□□□ 1.16
HLA-DOA-206ENST00000495532 CFTRP13569 1480 aa22.24■■□□□ 1.15
HLA-DOA-206ENST00000495532 URB2Q14146 1524 aaKnown RBP22.24■■□□□ 1.15
HLA-DOA-206ENST00000495532 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
HLA-DOA-206ENST00000495532 PRDM2Q13029 1718 aa22.06■■□□□ 1.12
HLA-DOA-206ENST00000495532 ZNF608Q9ULD9 1512 aaPredicted RBP22.06■■□□□ 1.12
HLA-DOA-206ENST00000495532 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
HLA-DOA-206ENST00000495532 TOP2AP11388 1531 aaKnown RBP22.01■■□□□ 1.11
HLA-DOA-206ENST00000495532 CYB5RLQ6IPT4 315 aa21.94■■□□□ 1.1
HLA-DOA-206ENST00000495532 EIF4G3O43432 1585 aaKnown RBP21.94■■□□□ 1.1
HLA-DOA-206ENST00000495532 RSF1Q96T23 1441 aaPredicted RBP21.91■■□□□ 1.1
HLA-DOA-206ENST00000495532 CHD1O14646 1710 aa21.91■■□□□ 1.1
HLA-DOA-206ENST00000495532 ARAP1Q96P48 1450 aa21.9■■□□□ 1.1
HLA-DOA-206ENST00000495532 TOPBP1Q92547 1522 aa21.89■■□□□ 1.09
HLA-DOA-206ENST00000495532 TRHP20396 242 aaPredicted RBP21.86■■□□□ 1.09
HLA-DOA-206ENST00000495532 TARBP1Q13395 1621 aaKnown RBP21.78■■□□□ 1.08
HLA-DOA-206ENST00000495532 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
HLA-DOA-206ENST00000495532 DNMBPQ6XZF7 1577 aa21.76■■□□□ 1.07
HLA-DOA-206ENST00000495532 AQRO60306 1485 aaKnown RBP eCLIP21.76■■□□□ 1.07
HLA-DOA-206ENST00000495532 CCDC88BA6NC98 1476 aa21.74■■□□□ 1.07
HLA-DOA-206ENST00000495532 FBLN2P98095 1184 aa21.65■■□□□ 1.06
HLA-DOA-206ENST00000495532 AEBP2Q6ZN18 517 aaPredicted RBP21.65■■□□□ 1.06
HLA-DOA-206ENST00000495532 POLA1P09884 1462 aaPredicted RBP21.63■■□□□ 1.05
HLA-DOA-206ENST00000495532 CLASP1Q7Z460 1538 aa21.62■■□□□ 1.05
HLA-DOA-206ENST00000495532 RAD54L2Q9Y4B4 1467 aa21.54■■□□□ 1.04
HLA-DOA-206ENST00000495532 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
HLA-DOA-206ENST00000495532 SYNJ1O43426 1573 aa21.52■■□□□ 1.04
HLA-DOA-206ENST00000495532 TDRD9Q8NDG6 1382 aaKnown RBP21.5■■□□□ 1.03
HLA-DOA-206ENST00000495532 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
HLA-DOA-206ENST00000495532 SOGA1O94964 1423 aa21.46■■□□□ 1.03
HLA-DOA-206ENST00000495532 MAGI1Q96QZ7 1491 aaPredicted RBP21.45■■□□□ 1.02
HLA-DOA-206ENST00000495532 CHMP7Q8WUX9 453 aaPredicted RBP21.4■■□□□ 1.02
HLA-DOA-206ENST00000495532 FGD5Q6ZNL6 1462 aa21.39■■□□□ 1.02
HLA-DOA-206ENST00000495532 SYNJ2O15056 1496 aa21.39■■□□□ 1.01
HLA-DOA-206ENST00000495532 GAPVD1Q14C86 1478 aa21.39■■□□□ 1.01
HLA-DOA-206ENST00000495532 GRIN2BQ13224 1484 aa21.37■■□□□ 1.01
HLA-DOA-206ENST00000495532 PBRM1Q86U86 1689 aa21.32■■□□□ 1
HLA-DOA-206ENST00000495532 CUX1P39880 1505 aa21.3■■□□□ 1
HLA-DOA-206ENST00000495532 ERCC6L2Q5T890 1561 aa21.24■□□□□ 0.99
HLA-DOA-206ENST00000495532 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
HLA-DOA-206ENST00000495532 KIF13AQ9H1H9 1805 aa21.18■□□□□ 0.98
HLA-DOA-206ENST00000495532 CEP170Q5SW79 1584 aa21.14■□□□□ 0.97
HLA-DOA-206ENST00000495532 ABCA10Q8WWZ4 1543 aa21.12■□□□□ 0.97
HLA-DOA-206ENST00000495532 GRIN2AQ12879 1464 aa21.12■□□□□ 0.97
HLA-DOA-206ENST00000495532 SHROOM2Q13796 1616 aa21.1■□□□□ 0.97
HLA-DOA-206ENST00000495532 NUP160Q12769 1436 aa21.08■□□□□ 0.97
HLA-DOA-206ENST00000495532 ADAMTS12P58397 1594 aa21.06■□□□□ 0.96
HLA-DOA-206ENST00000495532 FHAD1B1AJZ9 1412 aa20.91■□□□□ 0.94
HLA-DOA-206ENST00000495532 ABCC10Q5T3U5 1492 aa20.91■□□□□ 0.94
HLA-DOA-206ENST00000495532 PRG4Q92954 1404 aaPredicted RBP20.88■□□□□ 0.93
HLA-DOA-206ENST00000495532 DIP2BQ9P265 1576 aa20.88■□□□□ 0.93
HLA-DOA-206ENST00000495532 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
HLA-DOA-206ENST00000495532 MAPKBP1O60336 1514 aa20.87■□□□□ 0.93
HLA-DOA-206ENST00000495532 KDM4FA0A1W2PPD8 638 aa20.86■□□□□ 0.93
HLA-DOA-206ENST00000495532 FAM69CQ0P6D2 419 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms