RNA–Protein interactions for RNA: ENST00000495363.5

SMIM11A-207, Transcript of small integral membrane protein 11A, humanhuman

TSL 5

Gene SMIM11A, Length 1,029 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-207ENST00000495363 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
SMIM11A-207ENST00000495363 CCDC180Q9P1Z9 1646 aa26.47■■□□□ 1.83
SMIM11A-207ENST00000495363 ABCC9O60706 1549 aa26.17■■□□□ 1.78
SMIM11A-207ENST00000495363 DCAF8L2P0C7V8 631 aa25.15■■□□□ 1.62
SMIM11A-207ENST00000495363 RB1CC1Q8TDY2 1594 aa25.03■■□□□ 1.6
SMIM11A-207ENST00000495363 NACADO15069 1562 aa24.94■■□□□ 1.58
SMIM11A-207ENST00000495363 ZCCHC6Q5VYS8 1495 aaKnown RBP24.77■■□□□ 1.56
SMIM11A-207ENST00000495363 MYO15BQ96JP2 1530 aa24.68■■□□□ 1.54
SMIM11A-207ENST00000495363 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
SMIM11A-207ENST00000495363 PABPN1Q86U42 306 aaKnown RBP eCLIP24.48■■□□□ 1.51
SMIM11A-207ENST00000495363 UNC13AQ9UPW8 1703 aa24.43■■□□□ 1.5
SMIM11A-207ENST00000495363 SCRIBQ14160 1630 aa24.26■■□□□ 1.47
SMIM11A-207ENST00000495363 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
SMIM11A-207ENST00000495363 DNAJC5BQ9UF47 199 aa24.12■■□□□ 1.45
SMIM11A-207ENST00000495363 SHROOM4Q9ULL8 1493 aa23.92■■□□□ 1.42
SMIM11A-207ENST00000495363 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
SMIM11A-207ENST00000495363 CC2D2AQ9P2K1 1620 aa23.6■■□□□ 1.37
SMIM11A-207ENST00000495363 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
SMIM11A-207ENST00000495363 SMARCA4P51532 1647 aa23.13■■□□□ 1.29
SMIM11A-207ENST00000495363 BAZ1AQ9NRL2 1556 aaPredicted RBP23.09■■□□□ 1.29
SMIM11A-207ENST00000495363 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SMIM11A-207ENST00000495363 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
SMIM11A-207ENST00000495363 SMARCA2P51531 1590 aa23■■□□□ 1.27
SMIM11A-207ENST00000495363 MROH2BQ7Z745 1585 aa22.98■■□□□ 1.27
SMIM11A-207ENST00000495363 BAZ1BQ9UIG0 1483 aaKnown RBP22.89■■□□□ 1.25
SMIM11A-207ENST00000495363 HMGXB3Q12766 1538 aa22.88■■□□□ 1.25
SMIM11A-207ENST00000495363 PEG3Q9GZU2 1588 aa22.84■■□□□ 1.25
SMIM11A-207ENST00000495363 WIZO95785 1651 aa22.74■■□□□ 1.23
SMIM11A-207ENST00000495363 RSF1Q96T23 1441 aaPredicted RBP22.67■■□□□ 1.22
SMIM11A-207ENST00000495363 NESP48681 1621 aa22.59■■□□□ 1.21
SMIM11A-207ENST00000495363 ERCC6Q03468 1493 aa22.57■■□□□ 1.2
SMIM11A-207ENST00000495363 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
SMIM11A-207ENST00000495363 LAMC3Q9Y6N6 1575 aa22.44■■□□□ 1.18
SMIM11A-207ENST00000495363 CADPSQ9ULU8 1353 aa22.39■■□□□ 1.18
SMIM11A-207ENST00000495363 PDS5BQ9NTI5 1447 aa22.33■■□□□ 1.17
SMIM11A-207ENST00000495363 CUX2O14529 1486 aa22.28■■□□□ 1.16
SMIM11A-207ENST00000495363 KIF21AQ7Z4S6 1674 aa22.27■■□□□ 1.16
SMIM11A-207ENST00000495363 CCDC88BA6NC98 1476 aa22.22■■□□□ 1.15
SMIM11A-207ENST00000495363 CFTRP13569 1480 aa22.21■■□□□ 1.15
SMIM11A-207ENST00000495363 THOC2Q8NI27 1593 aaKnown RBP22.2■■□□□ 1.14
SMIM11A-207ENST00000495363 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
SMIM11A-207ENST00000495363 FANCD2Q9BXW9 1451 aa22.15■■□□□ 1.14
SMIM11A-207ENST00000495363 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
SMIM11A-207ENST00000495363 MRC2Q9UBG0 1479 aa22.11■■□□□ 1.13
SMIM11A-207ENST00000495363 WDR62O43379 1518 aa22.01■■□□□ 1.11
SMIM11A-207ENST00000495363 PRDM2Q13029 1718 aa21.97■■□□□ 1.11
SMIM11A-207ENST00000495363 URB2Q14146 1524 aaKnown RBP21.92■■□□□ 1.1
SMIM11A-207ENST00000495363 DNAJC5Q9H3Z4 198 aa21.78■■□□□ 1.08
SMIM11A-207ENST00000495363 TOPBP1Q92547 1522 aa21.77■■□□□ 1.08
SMIM11A-207ENST00000495363 ABCC8Q09428 1581 aa21.72■■□□□ 1.07
SMIM11A-207ENST00000495363 DNMBPQ6XZF7 1577 aa21.71■■□□□ 1.07
SMIM11A-207ENST00000495363 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
SMIM11A-207ENST00000495363 ZNF608Q9ULD9 1512 aaPredicted RBP21.6■■□□□ 1.05
SMIM11A-207ENST00000495363 POLA1P09884 1462 aaPredicted RBP21.58■■□□□ 1.04
SMIM11A-207ENST00000495363 CUX1P39880 1505 aa21.55■■□□□ 1.04
SMIM11A-207ENST00000495363 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
SMIM11A-207ENST00000495363 RAD54L2Q9Y4B4 1467 aa21.53■■□□□ 1.04
SMIM11A-207ENST00000495363 SOGA1O94964 1423 aa21.52■■□□□ 1.04
SMIM11A-207ENST00000495363 TARBP1Q13395 1621 aaKnown RBP21.5■■□□□ 1.03
SMIM11A-207ENST00000495363 AQRO60306 1485 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMIM11A-207ENST00000495363 EIF4G3O43432 1585 aaKnown RBP21.48■■□□□ 1.03
SMIM11A-207ENST00000495363 TDRD9Q8NDG6 1382 aaKnown RBP21.45■■□□□ 1.02
SMIM11A-207ENST00000495363 OSCARQ8IYS5 282 aa21.41■■□□□ 1.02
SMIM11A-207ENST00000495363 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
SMIM11A-207ENST00000495363 FBLN2P98095 1184 aa21.35■■□□□ 1.01
SMIM11A-207ENST00000495363 SYNJ1O43426 1573 aa21.34■■□□□ 1.01
SMIM11A-207ENST00000495363 TOP2BQ02880 1626 aa21.31■■□□□ 1
SMIM11A-207ENST00000495363 BIVM-ERCC5R4GMW8 1640 aa21.29■■□□□ 1
SMIM11A-207ENST00000495363 WDR97A6NE52 1622 aa21.27■■□□□ 1
SMIM11A-207ENST00000495363 ABCA10Q8WWZ4 1543 aa21.27■■□□□ 1
SMIM11A-207ENST00000495363 SNAPC4Q5SXM2 1469 aa21.26■□□□□ 0.99
SMIM11A-207ENST00000495363 GRIN2BQ13224 1484 aa21.25■□□□□ 0.99
SMIM11A-207ENST00000495363 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
SMIM11A-207ENST00000495363 CHD1O14646 1710 aa21.23■□□□□ 0.99
SMIM11A-207ENST00000495363 CHMP7Q8WUX9 453 aaPredicted RBP21.21■□□□□ 0.99
SMIM11A-207ENST00000495363 MAGI1Q96QZ7 1491 aaPredicted RBP21.18■□□□□ 0.98
SMIM11A-207ENST00000495363 ABCA5Q8WWZ7 1642 aa21.18■□□□□ 0.98
SMIM11A-207ENST00000495363 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
SMIM11A-207ENST00000495363 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
SMIM11A-207ENST00000495363 SYNJ2O15056 1496 aa21.12■□□□□ 0.97
SMIM11A-207ENST00000495363 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
SMIM11A-207ENST00000495363 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
SMIM11A-207ENST00000495363 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
SMIM11A-207ENST00000495363 ARHGEF11O15085 1522 aa21.03■□□□□ 0.96
SMIM11A-207ENST00000495363 ADAMTS12P58397 1594 aa21.01■□□□□ 0.95
SMIM11A-207ENST00000495363 ERICH3Q5RHP9 1530 aa21■□□□□ 0.95
SMIM11A-207ENST00000495363 FHAD1B1AJZ9 1412 aa20.98■□□□□ 0.95
SMIM11A-207ENST00000495363 GRIN2AQ12879 1464 aa20.98■□□□□ 0.95
SMIM11A-207ENST00000495363 CLASP1Q7Z460 1538 aa20.97■□□□□ 0.95
SMIM11A-207ENST00000495363 KIF27Q86VH2 1401 aa20.96■□□□□ 0.95
SMIM11A-207ENST00000495363 CYB5RLQ6IPT4 315 aa20.93■□□□□ 0.94
SMIM11A-207ENST00000495363 IGF1RP08069 1367 aa20.88■□□□□ 0.93
SMIM11A-207ENST00000495363 CEP170Q5SW79 1584 aa20.88■□□□□ 0.93
SMIM11A-207ENST00000495363 NUP160Q12769 1436 aa20.87■□□□□ 0.93
SMIM11A-207ENST00000495363 ARAP1Q96P48 1450 aa20.85■□□□□ 0.93
SMIM11A-207ENST00000495363 CUL7Q14999 1698 aa20.79■□□□□ 0.92
SMIM11A-207ENST00000495363 CARMIL1Q5VZK9 1371 aa20.78■□□□□ 0.92
SMIM11A-207ENST00000495363 RUSC2Q8N2Y8 1516 aa20.78■□□□□ 0.92
SMIM11A-207ENST00000495363 ERCC6L2Q5T890 1561 aa20.73■□□□□ 0.91
SMIM11A-207ENST00000495363 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms