RNA–Protein interactions for RNA: ENST00000494989.1

EPHA1-206, Transcript of EPH receptor A1, humanhuman

TSL 3

Gene EPHA1, Length 753 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1-206ENST00000494989 NISCHQ9Y2I1 1504 aa25.68■■□□□ 1.7
EPHA1-206ENST00000494989 CCDC180Q9P1Z9 1646 aa22.85■■□□□ 1.25
EPHA1-206ENST00000494989 ABCC9O60706 1549 aa22.52■■□□□ 1.2
EPHA1-206ENST00000494989 RB1CC1Q8TDY2 1594 aa21.48■■□□□ 1.03
EPHA1-206ENST00000494989 DCAF8L2P0C7V8 631 aa21.44■■□□□ 1.02
EPHA1-206ENST00000494989 NACADO15069 1562 aa21.44■■□□□ 1.02
EPHA1-206ENST00000494989 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.02
EPHA1-206ENST00000494989 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
EPHA1-206ENST00000494989 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
EPHA1-206ENST00000494989 DCAF1Q9Y4B6 1507 aa21.2■□□□□ 0.98
EPHA1-206ENST00000494989 UNC13AQ9UPW8 1703 aa21.17■□□□□ 0.98
EPHA1-206ENST00000494989 PABPN1Q86U42 306 aaKnown RBP eCLIP20.92■□□□□ 0.94
EPHA1-206ENST00000494989 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
EPHA1-206ENST00000494989 SCRIBQ14160 1630 aa20.89■□□□□ 0.94
EPHA1-206ENST00000494989 SHROOM4Q9ULL8 1493 aa20.54■□□□□ 0.88
EPHA1-206ENST00000494989 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
EPHA1-206ENST00000494989 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
EPHA1-206ENST00000494989 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
EPHA1-206ENST00000494989 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
EPHA1-206ENST00000494989 BAZ1AQ9NRL2 1556 aaPredicted RBP19.87■□□□□ 0.77
EPHA1-206ENST00000494989 MROH2BQ7Z745 1585 aa19.83■□□□□ 0.77
EPHA1-206ENST00000494989 ATAD2BQ9ULI0 1458 aa19.82■□□□□ 0.76
EPHA1-206ENST00000494989 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
EPHA1-206ENST00000494989 SMARCA2P51531 1590 aa19.77■□□□□ 0.76
EPHA1-206ENST00000494989 PEG3Q9GZU2 1588 aa19.73■□□□□ 0.75
EPHA1-206ENST00000494989 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
EPHA1-206ENST00000494989 DNAJC5Q9H3Z4 198 aa19.67■□□□□ 0.74
EPHA1-206ENST00000494989 WIZO95785 1651 aa19.66■□□□□ 0.74
EPHA1-206ENST00000494989 BAZ1BQ9UIG0 1483 aaKnown RBP19.64■□□□□ 0.73
EPHA1-206ENST00000494989 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
EPHA1-206ENST00000494989 CUX2O14529 1486 aa19.51■□□□□ 0.71
EPHA1-206ENST00000494989 ERCC6Q03468 1493 aa19.5■□□□□ 0.71
EPHA1-206ENST00000494989 NESP48681 1621 aa19.4■□□□□ 0.7
EPHA1-206ENST00000494989 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
EPHA1-206ENST00000494989 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
EPHA1-206ENST00000494989 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
EPHA1-206ENST00000494989 CADPSQ9ULU8 1353 aa19.19■□□□□ 0.66
EPHA1-206ENST00000494989 THOC2Q8NI27 1593 aaKnown RBP19.16■□□□□ 0.66
EPHA1-206ENST00000494989 CCDC88BA6NC98 1476 aa19.16■□□□□ 0.66
EPHA1-206ENST00000494989 CFTRP13569 1480 aa19.09■□□□□ 0.65
EPHA1-206ENST00000494989 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
EPHA1-206ENST00000494989 PRDM2Q13029 1718 aa19.07■□□□□ 0.64
EPHA1-206ENST00000494989 SUPT5HO00267 1087 aaKnown RBP19.06■□□□□ 0.64
EPHA1-206ENST00000494989 FANCD2Q9BXW9 1451 aa19■□□□□ 0.63
EPHA1-206ENST00000494989 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
EPHA1-206ENST00000494989 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
EPHA1-206ENST00000494989 WDR62O43379 1518 aa18.9■□□□□ 0.62
EPHA1-206ENST00000494989 URB2Q14146 1524 aaKnown RBP18.86■□□□□ 0.61
EPHA1-206ENST00000494989 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
EPHA1-206ENST00000494989 TOPBP1Q92547 1522 aa18.72■□□□□ 0.59
EPHA1-206ENST00000494989 DNMBPQ6XZF7 1577 aa18.69■□□□□ 0.58
EPHA1-206ENST00000494989 ABCC8Q09428 1581 aa18.64■□□□□ 0.57
EPHA1-206ENST00000494989 CUX1P39880 1505 aa18.61■□□□□ 0.57
EPHA1-206ENST00000494989 OSCARQ8IYS5 282 aa18.6■□□□□ 0.57
EPHA1-206ENST00000494989 POLA1P09884 1462 aaPredicted RBP18.56■□□□□ 0.56
EPHA1-206ENST00000494989 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
EPHA1-206ENST00000494989 IFT140Q96RY7 1462 aa18.55■□□□□ 0.56
EPHA1-206ENST00000494989 TARBP1Q13395 1621 aaKnown RBP18.55■□□□□ 0.56
EPHA1-206ENST00000494989 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.55
EPHA1-206ENST00000494989 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
EPHA1-206ENST00000494989 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
EPHA1-206ENST00000494989 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
EPHA1-206ENST00000494989 SOGA1O94964 1423 aa18.45■□□□□ 0.54
EPHA1-206ENST00000494989 BIVM-ERCC5R4GMW8 1640 aa18.45■□□□□ 0.54
EPHA1-206ENST00000494989 WDR97A6NE52 1622 aa18.43■□□□□ 0.54
EPHA1-206ENST00000494989 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
EPHA1-206ENST00000494989 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.54
EPHA1-206ENST00000494989 WRNQ14191 1432 aaPredicted RBP eCLIP18.41■□□□□ 0.54
EPHA1-206ENST00000494989 RIMBP3CA6NJZ7 1639 aa18.39■□□□□ 0.53
EPHA1-206ENST00000494989 RIMBP3BA6NNM3 1639 aa18.39■□□□□ 0.53
EPHA1-206ENST00000494989 RIMBP3Q9UFD9 1639 aa18.39■□□□□ 0.53
EPHA1-206ENST00000494989 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
EPHA1-206ENST00000494989 ABCA10Q8WWZ4 1543 aa18.31■□□□□ 0.52
EPHA1-206ENST00000494989 CHD1O14646 1710 aa18.31■□□□□ 0.52
EPHA1-206ENST00000494989 PBRM1Q86U86 1689 aa18.3■□□□□ 0.52
EPHA1-206ENST00000494989 ABCA5Q8WWZ7 1642 aa18.29■□□□□ 0.52
EPHA1-206ENST00000494989 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
EPHA1-206ENST00000494989 GAPVD1Q14C86 1478 aa18.25■□□□□ 0.51
EPHA1-206ENST00000494989 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
EPHA1-206ENST00000494989 GRIN2BQ13224 1484 aa18.22■□□□□ 0.51
EPHA1-206ENST00000494989 MAGI1Q96QZ7 1491 aaPredicted RBP18.18■□□□□ 0.5
EPHA1-206ENST00000494989 FBLN2P98095 1184 aa18.16■□□□□ 0.5
EPHA1-206ENST00000494989 CYB5RLQ6IPT4 315 aa18.16■□□□□ 0.5
EPHA1-206ENST00000494989 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
EPHA1-206ENST00000494989 ADAMTS12P58397 1594 aa18.11■□□□□ 0.49
EPHA1-206ENST00000494989 ERICH3Q5RHP9 1530 aa18.08■□□□□ 0.49
EPHA1-206ENST00000494989 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.48
EPHA1-206ENST00000494989 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
EPHA1-206ENST00000494989 TRHP20396 242 aaPredicted RBP18.04■□□□□ 0.48
EPHA1-206ENST00000494989 CLASP1Q7Z460 1538 aa18.03■□□□□ 0.48
EPHA1-206ENST00000494989 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
EPHA1-206ENST00000494989 FHAD1B1AJZ9 1412 aa18.01■□□□□ 0.47
EPHA1-206ENST00000494989 KIF27Q86VH2 1401 aa18■□□□□ 0.47
EPHA1-206ENST00000494989 CEP170Q5SW79 1584 aa17.98■□□□□ 0.47
EPHA1-206ENST00000494989 IGF1RP08069 1367 aa17.97■□□□□ 0.47
EPHA1-206ENST00000494989 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
EPHA1-206ENST00000494989 CUL7Q14999 1698 aa17.94■□□□□ 0.46
EPHA1-206ENST00000494989 NUP160Q12769 1436 aa17.93■□□□□ 0.46
EPHA1-206ENST00000494989 ERCC6L2Q5T890 1561 aa17.85■□□□□ 0.45
EPHA1-206ENST00000494989 CARMIL1Q5VZK9 1371 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms