RNA–Protein interactions for RNA: ENST00000494917.6

CCDC180-206, Transcript of coiled-coil domain containing 180, humanhuman

TSL 1 (best)

Gene CCDC180, Length 2,781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180-206ENST00000494917 NISCHQ9Y2I1 1504 aa24.1■■□□□ 1.45
CCDC180-206ENST00000494917 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
CCDC180-206ENST00000494917 ZCCHC6Q5VYS8 1495 aaKnown RBP20.27■□□□□ 0.84
CCDC180-206ENST00000494917 DCAF8L2P0C7V8 631 aa20.14■□□□□ 0.82
CCDC180-206ENST00000494917 SHROOM4Q9ULL8 1493 aa20.13■□□□□ 0.81
CCDC180-206ENST00000494917 DCAF1Q9Y4B6 1507 aa19.78■□□□□ 0.76
CCDC180-206ENST00000494917 ABCC9O60706 1549 aa19.72■□□□□ 0.75
CCDC180-206ENST00000494917 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
CCDC180-206ENST00000494917 MYO15BQ96JP2 1530 aa19.41■□□□□ 0.7
CCDC180-206ENST00000494917 SCRIBQ14160 1630 aa19.36■□□□□ 0.69
CCDC180-206ENST00000494917 NACADO15069 1562 aa19.32■□□□□ 0.68
CCDC180-206ENST00000494917 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
CCDC180-206ENST00000494917 RSF1Q96T23 1441 aaPredicted RBP18.86■□□□□ 0.61
CCDC180-206ENST00000494917 CECR2Q9BXF3 1484 aa18.85■□□□□ 0.61
CCDC180-206ENST00000494917 UNC13AQ9UPW8 1703 aa18.85■□□□□ 0.61
CCDC180-206ENST00000494917 PABPN1Q86U42 306 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCDC180-206ENST00000494917 MROH2BQ7Z745 1585 aa18.72■□□□□ 0.59
CCDC180-206ENST00000494917 CHIC1Q5VXU3 224 aa18.67■□□□□ 0.58
CCDC180-206ENST00000494917 BICRAQ9NZM4 1560 aa18.65■□□□□ 0.58
CCDC180-206ENST00000494917 WIZO95785 1651 aa18.59■□□□□ 0.57
CCDC180-206ENST00000494917 BAZ1AQ9NRL2 1556 aaPredicted RBP18.55■□□□□ 0.56
CCDC180-206ENST00000494917 SMARCA4P51532 1647 aa18.47■□□□□ 0.55
CCDC180-206ENST00000494917 TOP2AP11388 1531 aaKnown RBP18.27■□□□□ 0.52
CCDC180-206ENST00000494917 CCDC88BA6NC98 1476 aa18.2■□□□□ 0.5
CCDC180-206ENST00000494917 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
CCDC180-206ENST00000494917 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
CCDC180-206ENST00000494917 PEG3Q9GZU2 1588 aa18.15■□□□□ 0.5
CCDC180-206ENST00000494917 ATAD2BQ9ULI0 1458 aa18.14■□□□□ 0.49
CCDC180-206ENST00000494917 LOC105371045A0A1W2PR82 267 aa18.11■□□□□ 0.49
CCDC180-206ENST00000494917 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
CCDC180-206ENST00000494917 BAZ1BQ9UIG0 1483 aaKnown RBP18.05■□□□□ 0.48
CCDC180-206ENST00000494917 FAM9AQ8IZU1 332 aaPredicted RBP18.02■□□□□ 0.48
CCDC180-206ENST00000494917 ABCC8Q09428 1581 aa17.97■□□□□ 0.47
CCDC180-206ENST00000494917 NCAPD3P42695 1498 aa17.89■□□□□ 0.45
CCDC180-206ENST00000494917 EHMT2Q96KQ7 1210 aa17.89■□□□□ 0.45
CCDC180-206ENST00000494917 HRCP23327 699 aa17.87■□□□□ 0.45
CCDC180-206ENST00000494917 HMGXB3Q12766 1538 aa17.83■□□□□ 0.44
CCDC180-206ENST00000494917 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
CCDC180-206ENST00000494917 WRNQ14191 1432 aaPredicted RBP eCLIP17.72■□□□□ 0.43
CCDC180-206ENST00000494917 SOGA1O94964 1423 aa17.69■□□□□ 0.42
CCDC180-206ENST00000494917 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
CCDC180-206ENST00000494917 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
CCDC180-206ENST00000494917 CFTRP13569 1480 aa17.59■□□□□ 0.41
CCDC180-206ENST00000494917 PCGF6Q9BYE7 350 aa17.57■□□□□ 0.4
CCDC180-206ENST00000494917 CSRNP3Q8WYN3 585 aa17.53■□□□□ 0.4
CCDC180-206ENST00000494917 DNAJC5BQ9UF47 199 aa17.52■□□□□ 0.4
CCDC180-206ENST00000494917 CADPSQ9ULU8 1353 aa17.5■□□□□ 0.39
CCDC180-206ENST00000494917 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
CCDC180-206ENST00000494917 CUX1P39880 1505 aa17.46■□□□□ 0.39
CCDC180-206ENST00000494917 EEA1Q15075 1411 aa17.46■□□□□ 0.38
CCDC180-206ENST00000494917 BIVM-ERCC5R4GMW8 1640 aa17.43■□□□□ 0.38
CCDC180-206ENST00000494917 NESP48681 1621 aa17.41■□□□□ 0.38
CCDC180-206ENST00000494917 UBTFP17480 764 aaKnown RBP17.4■□□□□ 0.38
CCDC180-206ENST00000494917 PRDM2Q13029 1718 aa17.4■□□□□ 0.38
CCDC180-206ENST00000494917 PPARGC1BQ86YN6 1023 aaKnown RBP17.38■□□□□ 0.37
CCDC180-206ENST00000494917 TNIKQ9UKE5 1360 aa17.33■□□□□ 0.36
CCDC180-206ENST00000494917 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
CCDC180-206ENST00000494917 FANCD2Q9BXW9 1451 aa17.32■□□□□ 0.36
CCDC180-206ENST00000494917 CEP162Q5TB80 1403 aa17.32■□□□□ 0.36
CCDC180-206ENST00000494917 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
CCDC180-206ENST00000494917 RAPGEF2Q9Y4G8 1499 aa17.28■□□□□ 0.36
CCDC180-206ENST00000494917 TRIM26Q12899 539 aaPredicted RBP17.28■□□□□ 0.36
CCDC180-206ENST00000494917 KIF21BO75037 1637 aa17.26■□□□□ 0.35
CCDC180-206ENST00000494917 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
CCDC180-206ENST00000494917 RANGAP1P46060 587 aaPredicted RBP17.22■□□□□ 0.35
CCDC180-206ENST00000494917 KIF27Q86VH2 1401 aa17.22■□□□□ 0.35
CCDC180-206ENST00000494917 LAMC3Q9Y6N6 1575 aa17.2■□□□□ 0.34
CCDC180-206ENST00000494917 CUX2O14529 1486 aa17.19■□□□□ 0.34
CCDC180-206ENST00000494917 PRXQ9BXM0 1461 aa17.17■□□□□ 0.34
CCDC180-206ENST00000494917 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
CCDC180-206ENST00000494917 TTBK1Q5TCY1 1321 aaPredicted RBP17.15■□□□□ 0.34
CCDC180-206ENST00000494917 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
CCDC180-206ENST00000494917 DNMBPQ6XZF7 1577 aa17.14■□□□□ 0.33
CCDC180-206ENST00000494917 URB2Q14146 1524 aaKnown RBP17.12■□□□□ 0.33
CCDC180-206ENST00000494917 CLIP1P30622 1438 aa17.12■□□□□ 0.33
CCDC180-206ENST00000494917 POLA1P09884 1462 aaPredicted RBP17.11■□□□□ 0.33
CCDC180-206ENST00000494917 IGF1RP08069 1367 aa17.11■□□□□ 0.33
CCDC180-206ENST00000494917 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
CCDC180-206ENST00000494917 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
CCDC180-206ENST00000494917 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
CCDC180-206ENST00000494917 CARMIL1Q5VZK9 1371 aa17.02■□□□□ 0.31
CCDC180-206ENST00000494917 ZEB1P37275 1124 aaPredicted RBP17.01■□□□□ 0.31
CCDC180-206ENST00000494917 ABCA10Q8WWZ4 1543 aa17.01■□□□□ 0.31
CCDC180-206ENST00000494917 PELP1Q8IZL8 1130 aaKnown RBP17■□□□□ 0.31
CCDC180-206ENST00000494917 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CCDC180-206ENST00000494917 VPS8Q8N3P4 1428 aa16.96■□□□□ 0.31
CCDC180-206ENST00000494917 ARAP1Q96P48 1450 aa16.92■□□□□ 0.3
CCDC180-206ENST00000494917 WDR97A6NE52 1622 aa16.91■□□□□ 0.3
CCDC180-206ENST00000494917 MRC2Q9UBG0 1479 aa16.88■□□□□ 0.29
CCDC180-206ENST00000494917 ARHGAP35Q9NRY4 1499 aa16.88■□□□□ 0.29
CCDC180-206ENST00000494917 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
CCDC180-206ENST00000494917 TARBP1Q13395 1621 aaKnown RBP16.86■□□□□ 0.29
CCDC180-206ENST00000494917 ABCA5Q8WWZ7 1642 aa16.85■□□□□ 0.29
CCDC180-206ENST00000494917 APLP2Q06481 763 aa16.84■□□□□ 0.29
CCDC180-206ENST00000494917 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
CCDC180-206ENST00000494917 AQRO60306 1485 aaKnown RBP eCLIP16.82■□□□□ 0.288e-9■■■■■ 38.9
CCDC180-206ENST00000494917 ERCC6Q03468 1493 aa16.81■□□□□ 0.28
CCDC180-206ENST00000494917 CUL7Q14999 1698 aa16.8■□□□□ 0.28
CCDC180-206ENST00000494917 KANK4Q5T7N3 995 aaPredicted RBP16.77■□□□□ 0.28
CCDC180-206ENST00000494917 WDR62O43379 1518 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 368.5 ms