RNA–Protein interactions for RNA: ENST00000494867.1

USP34-221, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 795 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-221ENST00000494867 NISCHQ9Y2I1 1504 aa27.58■■■□□ 2.01
USP34-221ENST00000494867 CHIC1Q5VXU3 224 aa26.58■■□□□ 1.85
USP34-221ENST00000494867 AEBP2Q6ZN18 517 aaPredicted RBP26.44■■□□□ 1.82
USP34-221ENST00000494867 CCDC180Q9P1Z9 1646 aa24.52■■□□□ 1.52
USP34-221ENST00000494867 ABCC9O60706 1549 aa23.83■■□□□ 1.41
USP34-221ENST00000494867 PHF23Q9BUL5 403 aaPredicted RBP23.37■■□□□ 1.33
USP34-221ENST00000494867 ZCCHC6Q5VYS8 1495 aaKnown RBP23.05■■□□□ 1.28
USP34-221ENST00000494867 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
USP34-221ENST00000494867 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
USP34-221ENST00000494867 NACADO15069 1562 aa22.97■■□□□ 1.27
USP34-221ENST00000494867 MYO15BQ96JP2 1530 aa22.83■■□□□ 1.25
USP34-221ENST00000494867 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
USP34-221ENST00000494867 UNC13AQ9UPW8 1703 aa22.48■■□□□ 1.19
USP34-221ENST00000494867 SENP3Q9H4L4 574 aaPredicted RBP22.47■■□□□ 1.19
USP34-221ENST00000494867 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
USP34-221ENST00000494867 BICRAQ9NZM4 1560 aa22.25■■□□□ 1.15
USP34-221ENST00000494867 PABPN1Q86U42 306 aaKnown RBP eCLIP22.24■■□□□ 1.15
USP34-221ENST00000494867 SHROOM4Q9ULL8 1493 aa22.04■■□□□ 1.12
USP34-221ENST00000494867 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
USP34-221ENST00000494867 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
USP34-221ENST00000494867 DNAJC5BQ9UF47 199 aa21.61■■□□□ 1.05
USP34-221ENST00000494867 CC2D2AQ9P2K1 1620 aa21.55■■□□□ 1.04
USP34-221ENST00000494867 CECR2Q9BXF3 1484 aa21.46■■□□□ 1.03
USP34-221ENST00000494867 SMARCA4P51532 1647 aa21.42■■□□□ 1.02
USP34-221ENST00000494867 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
USP34-221ENST00000494867 MROH2BQ7Z745 1585 aa21.27■■□□□ 1
USP34-221ENST00000494867 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
USP34-221ENST00000494867 ATAD2BQ9ULI0 1458 aa21.21■□□□□ 0.99
USP34-221ENST00000494867 PEG3Q9GZU2 1588 aa21.15■□□□□ 0.98
USP34-221ENST00000494867 NCAPD3P42695 1498 aa21.13■□□□□ 0.97
USP34-221ENST00000494867 HMGXB3Q12766 1538 aa21.13■□□□□ 0.97
USP34-221ENST00000494867 BAZ1BQ9UIG0 1483 aaKnown RBP21.1■□□□□ 0.97
USP34-221ENST00000494867 WIZO95785 1651 aa21.09■□□□□ 0.97
USP34-221ENST00000494867 RSF1Q96T23 1441 aaPredicted RBP21.05■□□□□ 0.96
USP34-221ENST00000494867 TOP2AP11388 1531 aaKnown RBP20.88■□□□□ 0.93
USP34-221ENST00000494867 FOXD1Q16676 465 aa20.68■□□□□ 0.9
USP34-221ENST00000494867 SUPT5HO00267 1087 aaKnown RBP20.67■□□□□ 0.9
USP34-221ENST00000494867 NESP48681 1621 aa20.65■□□□□ 0.9
USP34-221ENST00000494867 LAMC3Q9Y6N6 1575 aa20.63■□□□□ 0.89
USP34-221ENST00000494867 CCDC88BA6NC98 1476 aa20.57■□□□□ 0.88
USP34-221ENST00000494867 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
USP34-221ENST00000494867 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
USP34-221ENST00000494867 CFTRP13569 1480 aa20.47■□□□□ 0.87
USP34-221ENST00000494867 KIF21AQ7Z4S6 1674 aa20.47■□□□□ 0.87
USP34-221ENST00000494867 ADRA2BP18089 450 aa20.46■□□□□ 0.87
USP34-221ENST00000494867 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
USP34-221ENST00000494867 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
USP34-221ENST00000494867 PPP6R1Q9UPN7 881 aa20.39■□□□□ 0.85
USP34-221ENST00000494867 FANCD2Q9BXW9 1451 aa20.36■□□□□ 0.85
USP34-221ENST00000494867 CEP164Q9UPV0 1460 aa20.35■□□□□ 0.85
USP34-221ENST00000494867 THOC2Q8NI27 1593 aaKnown RBP20.34■□□□□ 0.85
USP34-221ENST00000494867 MRC2Q9UBG0 1479 aa20.28■□□□□ 0.84
USP34-221ENST00000494867 CUX2O14529 1486 aa20.24■□□□□ 0.83
USP34-221ENST00000494867 WDR62O43379 1518 aa20.2■□□□□ 0.82
USP34-221ENST00000494867 URB2Q14146 1524 aaKnown RBP20.15■□□□□ 0.82
USP34-221ENST00000494867 DNMBPQ6XZF7 1577 aa20.07■□□□□ 0.8
USP34-221ENST00000494867 TOPBP1Q92547 1522 aa20.06■□□□□ 0.8
USP34-221ENST00000494867 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
USP34-221ENST00000494867 CUX1P39880 1505 aa19.97■□□□□ 0.79
USP34-221ENST00000494867 POLA1P09884 1462 aaPredicted RBP19.89■□□□□ 0.77
USP34-221ENST00000494867 FGD5Q6ZNL6 1462 aa19.88■□□□□ 0.77
USP34-221ENST00000494867 IFT140Q96RY7 1462 aa19.88■□□□□ 0.77
USP34-221ENST00000494867 WRNQ14191 1432 aaPredicted RBP eCLIP19.88■□□□□ 0.77
USP34-221ENST00000494867 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
USP34-221ENST00000494867 BIVM-ERCC5R4GMW8 1640 aa19.85■□□□□ 0.77
USP34-221ENST00000494867 TOP2BQ02880 1626 aa19.84■□□□□ 0.77
USP34-221ENST00000494867 TARBP1Q13395 1621 aaKnown RBP19.81■□□□□ 0.76
USP34-221ENST00000494867 RAD54L2Q9Y4B4 1467 aa19.79■□□□□ 0.76
USP34-221ENST00000494867 SOGA1O94964 1423 aa19.78■□□□□ 0.76
USP34-221ENST00000494867 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
USP34-221ENST00000494867 EIF4G3O43432 1585 aaKnown RBP19.77■□□□□ 0.76
USP34-221ENST00000494867 PIAS4Q8N2W9 510 aaPredicted RBP19.75■□□□□ 0.75
USP34-221ENST00000494867 WDR97A6NE52 1622 aa19.75■□□□□ 0.75
USP34-221ENST00000494867 KCNA4P22459 653 aa19.69■□□□□ 0.74
USP34-221ENST00000494867 AQRO60306 1485 aaKnown RBP eCLIP19.67■□□□□ 0.742e-7■■□□□ 12.5
USP34-221ENST00000494867 ABCA10Q8WWZ4 1543 aa19.67■□□□□ 0.74
USP34-221ENST00000494867 TDRD9Q8NDG6 1382 aaKnown RBP19.65■□□□□ 0.74
USP34-221ENST00000494867 ABCA5Q8WWZ7 1642 aa19.62■□□□□ 0.73
USP34-221ENST00000494867 PBRM1Q86U86 1689 aa19.61■□□□□ 0.73
USP34-221ENST00000494867 GAPVD1Q14C86 1478 aa19.58■□□□□ 0.72
USP34-221ENST00000494867 GRIN2BQ13224 1484 aa19.56■□□□□ 0.72
USP34-221ENST00000494867 SNAPC4Q5SXM2 1469 aa19.55■□□□□ 0.72
USP34-221ENST00000494867 MAGI1Q96QZ7 1491 aaPredicted RBP19.5■□□□□ 0.71
USP34-221ENST00000494867 CHD1O14646 1710 aa19.5■□□□□ 0.71
USP34-221ENST00000494867 TRIM41Q8WV44 630 aa19.49■□□□□ 0.71
USP34-221ENST00000494867 KIF27Q86VH2 1401 aa19.45■□□□□ 0.7
USP34-221ENST00000494867 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
USP34-221ENST00000494867 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
USP34-221ENST00000494867 FBLN2P98095 1184 aa19.43■□□□□ 0.7
USP34-221ENST00000494867 SYNJ2O15056 1496 aa19.41■□□□□ 0.7
USP34-221ENST00000494867 PPP4R3CPQ6ZMV5 832 aa19.39■□□□□ 0.69
USP34-221ENST00000494867 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
USP34-221ENST00000494867 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
USP34-221ENST00000494867 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
USP34-221ENST00000494867 CUL7Q14999 1698 aa19.35■□□□□ 0.69
USP34-221ENST00000494867 DNAJC5Q9H3Z4 198 aa19.33■□□□□ 0.68
USP34-221ENST00000494867 GRIN2AQ12879 1464 aa19.32■□□□□ 0.68
USP34-221ENST00000494867 RUSC2Q8N2Y8 1516 aa19.3■□□□□ 0.68
USP34-221ENST00000494867 IGF1RP08069 1367 aa19.29■□□□□ 0.68
USP34-221ENST00000494867 CLASP1Q7Z460 1538 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms