RNA–Protein interactions for RNA: ENST00000494783.1

NOTCH1-203, Transcript of notch 1, humanhuman

TSL 3

Gene NOTCH1, Length 652 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-203ENST00000494783 NISCHQ9Y2I1 1504 aa43.63■■■■■ 4.58
NOTCH1-203ENST00000494783 CCDC180Q9P1Z9 1646 aa38.76■■■■□ 3.8
NOTCH1-203ENST00000494783 ABCC9O60706 1549 aa38.41■■■■□ 3.74
NOTCH1-203ENST00000494783 DCAF8L2P0C7V8 631 aa36.76■■■■□ 3.48
NOTCH1-203ENST00000494783 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
NOTCH1-203ENST00000494783 NACADO15069 1562 aa36.62■■■■□ 3.45
NOTCH1-203ENST00000494783 MYO15BQ96JP2 1530 aa36.33■■■■□ 3.41
NOTCH1-203ENST00000494783 ZCCHC6Q5VYS8 1495 aaKnown RBP36.26■■■■□ 3.4
NOTCH1-203ENST00000494783 DCAF1Q9Y4B6 1507 aa36.05■■■■□ 3.36
NOTCH1-203ENST00000494783 PABPN1Q86U42 306 aaKnown RBP eCLIP35.95■■■■□ 3.35
NOTCH1-203ENST00000494783 UNC13AQ9UPW8 1703 aa35.7■■■■□ 3.31
NOTCH1-203ENST00000494783 DNAJC5BQ9UF47 199 aa35.62■■■■□ 3.29
NOTCH1-203ENST00000494783 BICRAQ9NZM4 1560 aa35.62■■■■□ 3.29
NOTCH1-203ENST00000494783 SCRIBQ14160 1630 aa35.45■■■■□ 3.27
NOTCH1-203ENST00000494783 SHROOM4Q9ULL8 1493 aa35.22■■■■□ 3.23
NOTCH1-203ENST00000494783 EIF4G1Q04637 1599 aaKnown RBP34.73■■■■□ 3.15
NOTCH1-203ENST00000494783 CC2D2AQ9P2K1 1620 aa34.64■■■■□ 3.14
NOTCH1-203ENST00000494783 CECR2Q9BXF3 1484 aa34.55■■■■□ 3.12
NOTCH1-203ENST00000494783 NCAPD3P42695 1498 aa33.88■■■■□ 3.01
NOTCH1-203ENST00000494783 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
NOTCH1-203ENST00000494783 ATAD2BQ9ULI0 1458 aa33.84■■■■□ 3.01
NOTCH1-203ENST00000494783 BAZ1AQ9NRL2 1556 aaPredicted RBP33.81■■■■□ 3
NOTCH1-203ENST00000494783 SMARCA2P51531 1590 aa33.72■■■□□ 2.99
NOTCH1-203ENST00000494783 MROH2BQ7Z745 1585 aa33.63■■■□□ 2.97
NOTCH1-203ENST00000494783 HMGXB3Q12766 1538 aa33.59■■■□□ 2.97
NOTCH1-203ENST00000494783 PEG3Q9GZU2 1588 aa33.53■■■□□ 2.96
NOTCH1-203ENST00000494783 BAZ1BQ9UIG0 1483 aaKnown RBP33.53■■■□□ 2.96
NOTCH1-203ENST00000494783 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
NOTCH1-203ENST00000494783 WIZO95785 1651 aa33.18■■■□□ 2.9
NOTCH1-203ENST00000494783 NESP48681 1621 aa33.13■■■□□ 2.89
NOTCH1-203ENST00000494783 ERCC6Q03468 1493 aa33.13■■■□□ 2.89
NOTCH1-203ENST00000494783 LAMC3Q9Y6N6 1575 aa32.93■■■□□ 2.86
NOTCH1-203ENST00000494783 CADPSQ9ULU8 1353 aa32.91■■■□□ 2.86
NOTCH1-203ENST00000494783 CUX2O14529 1486 aa32.85■■■□□ 2.85
NOTCH1-203ENST00000494783 TOP2AP11388 1531 aaKnown RBP32.84■■■□□ 2.85
NOTCH1-203ENST00000494783 PDS5BQ9NTI5 1447 aa32.84■■■□□ 2.85
NOTCH1-203ENST00000494783 CFTRP13569 1480 aa32.61■■■□□ 2.81
NOTCH1-203ENST00000494783 THOC2Q8NI27 1593 aaKnown RBP32.58■■■□□ 2.81
NOTCH1-203ENST00000494783 KIF21AQ7Z4S6 1674 aa32.56■■■□□ 2.8
NOTCH1-203ENST00000494783 CCDC88BA6NC98 1476 aa32.54■■■□□ 2.8
NOTCH1-203ENST00000494783 FANCD2Q9BXW9 1451 aa32.49■■■□□ 2.79
NOTCH1-203ENST00000494783 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
NOTCH1-203ENST00000494783 CEP164Q9UPV0 1460 aa32.45■■■□□ 2.79
NOTCH1-203ENST00000494783 WDR62O43379 1518 aa32.33■■■□□ 2.77
NOTCH1-203ENST00000494783 DNAJC5Q9H3Z4 198 aa32.31■■■□□ 2.76
NOTCH1-203ENST00000494783 SUPT5HO00267 1087 aaKnown RBP32.22■■■□□ 2.75
NOTCH1-203ENST00000494783 URB2Q14146 1524 aaKnown RBP32.16■■■□□ 2.74
NOTCH1-203ENST00000494783 PRDM2Q13029 1718 aa32.04■■■□□ 2.72
NOTCH1-203ENST00000494783 TOPBP1Q92547 1522 aa31.9■■■□□ 2.7
NOTCH1-203ENST00000494783 ABCC8Q09428 1581 aa31.89■■■□□ 2.7
NOTCH1-203ENST00000494783 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
NOTCH1-203ENST00000494783 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
NOTCH1-203ENST00000494783 ZNF608Q9ULD9 1512 aaPredicted RBP31.7■■■□□ 2.66
NOTCH1-203ENST00000494783 POLA1P09884 1462 aaPredicted RBP31.63■■■□□ 2.65
NOTCH1-203ENST00000494783 OSCARQ8IYS5 282 aa31.57■■■□□ 2.64
NOTCH1-203ENST00000494783 CUX1P39880 1505 aa31.56■■■□□ 2.64
NOTCH1-203ENST00000494783 SOGA1O94964 1423 aa31.56■■■□□ 2.64
NOTCH1-203ENST00000494783 RAD54L2Q9Y4B4 1467 aa31.53■■■□□ 2.64
NOTCH1-203ENST00000494783 TARBP1Q13395 1621 aaKnown RBP31.53■■■□□ 2.64
NOTCH1-203ENST00000494783 AQRO60306 1485 aaKnown RBP eCLIP31.52■■■□□ 2.641e-7■■■■■ 42.6
NOTCH1-203ENST00000494783 FGD5Q6ZNL6 1462 aa31.51■■■□□ 2.63
NOTCH1-203ENST00000494783 TDRD9Q8NDG6 1382 aaKnown RBP31.44■■■□□ 2.62
NOTCH1-203ENST00000494783 EIF4G3O43432 1585 aaKnown RBP31.44■■■□□ 2.62
NOTCH1-203ENST00000494783 WRNQ14191 1432 aaPredicted RBP eCLIP31.29■■■□□ 2.6
NOTCH1-203ENST00000494783 FBLN2P98095 1184 aa31.27■■■□□ 2.6
NOTCH1-203ENST00000494783 WDR97A6NE52 1622 aa31.22■■■□□ 2.59
NOTCH1-203ENST00000494783 ABCA10Q8WWZ4 1543 aa31.19■■■□□ 2.58
NOTCH1-203ENST00000494783 GRIN2BQ13224 1484 aa31.18■■■□□ 2.58
NOTCH1-203ENST00000494783 SNAPC4Q5SXM2 1469 aa31.16■■■□□ 2.58
NOTCH1-203ENST00000494783 TOP2BQ02880 1626 aa31.16■■■□□ 2.58
NOTCH1-203ENST00000494783 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
NOTCH1-203ENST00000494783 SYNJ1O43426 1573 aa31.15■■■□□ 2.58
NOTCH1-203ENST00000494783 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
NOTCH1-203ENST00000494783 CHMP7Q8WUX9 453 aaPredicted RBP31.12■■■□□ 2.57
NOTCH1-203ENST00000494783 MAGI1Q96QZ7 1491 aaPredicted RBP31.1■■■□□ 2.57
NOTCH1-203ENST00000494783 BIVM-ERCC5R4GMW8 1640 aa31.09■■■□□ 2.57
NOTCH1-203ENST00000494783 CHD1O14646 1710 aa31.03■■■□□ 2.56
NOTCH1-203ENST00000494783 SYNJ2O15056 1496 aa31.01■■■□□ 2.55
NOTCH1-203ENST00000494783 ABCA5Q8WWZ7 1642 aa31■■■□□ 2.55
NOTCH1-203ENST00000494783 ARHGEF11O15085 1522 aa30.93■■■□□ 2.54
NOTCH1-203ENST00000494783 PBRM1Q86U86 1689 aa30.9■■■□□ 2.54
NOTCH1-203ENST00000494783 RIMBP3CA6NJZ7 1639 aa30.9■■■□□ 2.54
NOTCH1-203ENST00000494783 RIMBP3BA6NNM3 1639 aa30.9■■■□□ 2.54
NOTCH1-203ENST00000494783 RIMBP3Q9UFD9 1639 aa30.9■■■□□ 2.54
NOTCH1-203ENST00000494783 CLASP1Q7Z460 1538 aa30.8■■■□□ 2.52
NOTCH1-203ENST00000494783 CYB5RLQ6IPT4 315 aa30.79■■■□□ 2.52
NOTCH1-203ENST00000494783 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
NOTCH1-203ENST00000494783 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
NOTCH1-203ENST00000494783 GRIN2AQ12879 1464 aa30.76■■■□□ 2.52
NOTCH1-203ENST00000494783 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
NOTCH1-203ENST00000494783 KIF27Q86VH2 1401 aa30.67■■■□□ 2.5
NOTCH1-203ENST00000494783 ARAP1Q96P48 1450 aa30.67■■■□□ 2.5
NOTCH1-203ENST00000494783 NUP160Q12769 1436 aa30.65■■■□□ 2.5
NOTCH1-203ENST00000494783 IGF1RP08069 1367 aa30.64■■■□□ 2.5
NOTCH1-203ENST00000494783 CEP170Q5SW79 1584 aa30.57■■■□□ 2.48
NOTCH1-203ENST00000494783 CARMIL1Q5VZK9 1371 aa30.43■■■□□ 2.46
NOTCH1-203ENST00000494783 JPH4Q96JJ6 628 aa30.43■■■□□ 2.46
NOTCH1-203ENST00000494783 ERCC6L2Q5T890 1561 aa30.38■■■□□ 2.45
NOTCH1-203ENST00000494783 CUL7Q14999 1698 aa30.37■■■□□ 2.45
NOTCH1-203ENST00000494783 PRG4Q92954 1404 aaPredicted RBP30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms