RNA–Protein interactions for RNA: ENST00000494645.1

SEC23B-208, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 2

Gene SEC23B, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-208ENST00000494645 AEBP2Q6ZN18 517 aaPredicted RBP18.92■□□□□ 0.62
SEC23B-208ENST00000494645 CHIC1Q5VXU3 224 aa17.73■□□□□ 0.43
SEC23B-208ENST00000494645 NISCHQ9Y2I1 1504 aa16.86■□□□□ 0.29
SEC23B-208ENST00000494645 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
SEC23B-208ENST00000494645 PHF23Q9BUL5 403 aaPredicted RBP15.89■□□□□ 0.13
SEC23B-208ENST00000494645 ABCC9O60706 1549 aa15.33■□□□□ 0.05
SEC23B-208ENST00000494645 CCDC180Q9P1Z9 1646 aa15.08■□□□□ 0
SEC23B-208ENST00000494645 FOXD1Q16676 465 aa15.08■□□□□ 0
SEC23B-208ENST00000494645 DNAJC5BQ9UF47 199 aa14.5□□□□□ -0.09
SEC23B-208ENST00000494645 RB1CC1Q8TDY2 1594 aa14.46□□□□□ -0.09
SEC23B-208ENST00000494645 DCAF8L2P0C7V8 631 aa14.45□□□□□ -0.1
SEC23B-208ENST00000494645 PABPN1Q86U42 306 aaKnown RBP eCLIP14.33□□□□□ -0.12
SEC23B-208ENST00000494645 NACADO15069 1562 aa14.32□□□□□ -0.12
SEC23B-208ENST00000494645 POTEDQ86YR6 584 aa14.21□□□□□ -0.13
SEC23B-208ENST00000494645 MSH5O43196 834 aa14.15□□□□□ -0.14
SEC23B-208ENST00000494645 UNC13AQ9UPW8 1703 aa14.09□□□□□ -0.15
SEC23B-208ENST00000494645 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
SEC23B-208ENST00000494645 BICRAQ9NZM4 1560 aa14.05□□□□□ -0.16
SEC23B-208ENST00000494645 PLPPR3Q6T4P5 718 aa14.04□□□□□ -0.16
SEC23B-208ENST00000494645 PIAS4Q8N2W9 510 aaPredicted RBP14□□□□□ -0.17
SEC23B-208ENST00000494645 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
SEC23B-208ENST00000494645 ZCCHC6Q5VYS8 1495 aaKnown RBP13.93□□□□□ -0.18
SEC23B-208ENST00000494645 ADRA2BP18089 450 aa13.87□□□□□ -0.19
SEC23B-208ENST00000494645 SCRIBQ14160 1630 aa13.86□□□□□ -0.19
SEC23B-208ENST00000494645 DCAF1Q9Y4B6 1507 aa13.85□□□□□ -0.19
SEC23B-208ENST00000494645 CECR2Q9BXF3 1484 aa13.8□□□□□ -0.2
SEC23B-208ENST00000494645 CC2D2AQ9P2K1 1620 aa13.78□□□□□ -0.2
SEC23B-208ENST00000494645 SHROOM4Q9ULL8 1493 aa13.77□□□□□ -0.21
SEC23B-208ENST00000494645 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
SEC23B-208ENST00000494645 DNAJC5Q9H3Z4 198 aa13.33□□□□□ -0.28
SEC23B-208ENST00000494645 NCAPD3P42695 1498 aa13.25□□□□□ -0.29
SEC23B-208ENST00000494645 ERCC6Q03468 1493 aa13.23□□□□□ -0.29
SEC23B-208ENST00000494645 ATAD2BQ9ULI0 1458 aa13.23□□□□□ -0.29
SEC23B-208ENST00000494645 CUX2O14529 1486 aa13.16□□□□□ -0.3
SEC23B-208ENST00000494645 SMARCA4P51532 1647 aa13.16□□□□□ -0.3
SEC23B-208ENST00000494645 SMARCA2P51531 1590 aa13.14□□□□□ -0.31
SEC23B-208ENST00000494645 NESP48681 1621 aa13.13□□□□□ -0.31
SEC23B-208ENST00000494645 HMGXB3Q12766 1538 aa13.11□□□□□ -0.31
SEC23B-208ENST00000494645 BAZ1BQ9UIG0 1483 aaKnown RBP13.1□□□□□ -0.31
SEC23B-208ENST00000494645 BAZ1AQ9NRL2 1556 aaPredicted RBP13.07□□□□□ -0.32
SEC23B-208ENST00000494645 MROH2BQ7Z745 1585 aa13.02□□□□□ -0.33
SEC23B-208ENST00000494645 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
SEC23B-208ENST00000494645 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
SEC23B-208ENST00000494645 LAMC3Q9Y6N6 1575 aa12.94□□□□□ -0.34
SEC23B-208ENST00000494645 PDS5BQ9NTI5 1447 aa12.92□□□□□ -0.34
SEC23B-208ENST00000494645 KIF21AQ7Z4S6 1674 aa12.89□□□□□ -0.35
SEC23B-208ENST00000494645 CADPSQ9ULU8 1353 aa12.88□□□□□ -0.35
SEC23B-208ENST00000494645 WIZO95785 1651 aa12.84□□□□□ -0.35
SEC23B-208ENST00000494645 MRC2Q9UBG0 1479 aa12.81□□□□□ -0.36
SEC23B-208ENST00000494645 MAPK8IP2Q13387 824 aaPredicted RBP12.81□□□□□ -0.36
SEC23B-208ENST00000494645 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
SEC23B-208ENST00000494645 DMRT2Q9Y5R5 561 aa12.77□□□□□ -0.37
SEC23B-208ENST00000494645 WDR62O43379 1518 aa12.75□□□□□ -0.37
SEC23B-208ENST00000494645 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
SEC23B-208ENST00000494645 FANCD2Q9BXW9 1451 aa12.73□□□□□ -0.37
SEC23B-208ENST00000494645 RSF1Q96T23 1441 aaPredicted RBP12.72□□□□□ -0.37
SEC23B-208ENST00000494645 CFTRP13569 1480 aa12.68□□□□□ -0.38
SEC23B-208ENST00000494645 TOP2AP11388 1531 aaKnown RBP12.65□□□□□ -0.38
SEC23B-208ENST00000494645 SCAF1Q9H7N4 1312 aaKnown RBP12.63□□□□□ -0.39
SEC23B-208ENST00000494645 URB2Q14146 1524 aaKnown RBP12.63□□□□□ -0.39
SEC23B-208ENST00000494645 OSCARQ8IYS5 282 aa12.63□□□□□ -0.39
SEC23B-208ENST00000494645 CCDC88BA6NC98 1476 aa12.56□□□□□ -0.4
SEC23B-208ENST00000494645 ZNF608Q9ULD9 1512 aaPredicted RBP12.52□□□□□ -0.41
SEC23B-208ENST00000494645 IFT140Q96RY7 1462 aa12.48□□□□□ -0.41
SEC23B-208ENST00000494645 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
SEC23B-208ENST00000494645 PRDM2Q13029 1718 aa12.45□□□□□ -0.42
SEC23B-208ENST00000494645 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
SEC23B-208ENST00000494645 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
SEC23B-208ENST00000494645 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
SEC23B-208ENST00000494645 AQRO60306 1485 aaKnown RBP eCLIP12.41□□□□□ -0.42
SEC23B-208ENST00000494645 FBLN2P98095 1184 aa12.41□□□□□ -0.42
SEC23B-208ENST00000494645 ABCC8Q09428 1581 aa12.39□□□□□ -0.43
SEC23B-208ENST00000494645 DNMBPQ6XZF7 1577 aa12.39□□□□□ -0.43
SEC23B-208ENST00000494645 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
SEC23B-208ENST00000494645 EIF4G3O43432 1585 aaKnown RBP12.39□□□□□ -0.43
SEC23B-208ENST00000494645 ARHGEF11O15085 1522 aa12.38□□□□□ -0.43
SEC23B-208ENST00000494645 RAD54L2Q9Y4B4 1467 aa12.34□□□□□ -0.43
SEC23B-208ENST00000494645 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
SEC23B-208ENST00000494645 TARBP1Q13395 1621 aaKnown RBP12.33□□□□□ -0.43
SEC23B-208ENST00000494645 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
SEC23B-208ENST00000494645 SOGA1O94964 1423 aa12.31□□□□□ -0.44
SEC23B-208ENST00000494645 TRHP20396 242 aaPredicted RBP12.3□□□□□ -0.44
SEC23B-208ENST00000494645 CHD1O14646 1710 aa12.3□□□□□ -0.44
SEC23B-208ENST00000494645 PPP4R3CPQ6ZMV5 832 aa12.28□□□□□ -0.44
SEC23B-208ENST00000494645 ARAP1Q96P48 1450 aa12.27□□□□□ -0.45
SEC23B-208ENST00000494645 CACNB1Q02641 598 aaPredicted RBP12.26□□□□□ -0.45
SEC23B-208ENST00000494645 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
SEC23B-208ENST00000494645 SNAPC4Q5SXM2 1469 aa12.26□□□□□ -0.45
SEC23B-208ENST00000494645 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
SEC23B-208ENST00000494645 CUX1P39880 1505 aa12.23□□□□□ -0.45
SEC23B-208ENST00000494645 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
SEC23B-208ENST00000494645 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
SEC23B-208ENST00000494645 DCAF8L1A6NGE4 600 aa12.19□□□□□ -0.46
SEC23B-208ENST00000494645 GRIN2BQ13224 1484 aa12.19□□□□□ -0.46
SEC23B-208ENST00000494645 MAGI1Q96QZ7 1491 aaPredicted RBP12.17□□□□□ -0.46
SEC23B-208ENST00000494645 CLASP1Q7Z460 1538 aa12.16□□□□□ -0.46
SEC23B-208ENST00000494645 SYNJ1O43426 1573 aa12.15□□□□□ -0.46
SEC23B-208ENST00000494645 SYNJ2O15056 1496 aa12.14□□□□□ -0.47
SEC23B-208ENST00000494645 GAPVD1Q14C86 1478 aa12.14□□□□□ -0.47
SEC23B-208ENST00000494645 WDR97A6NE52 1622 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 286.5 ms