RNA–Protein interactions for RNA: ENST00000494595.1

CNNM3-205, Transcript of cyclin and CBS domain divalent metal cation transport mediator 3, humanhuman

TSL 5

Gene CNNM3, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNNM3-205ENST00000494595 NISCHQ9Y2I1 1504 aa33.59■■■□□ 2.97
CNNM3-205ENST00000494595 CCDC180Q9P1Z9 1646 aa29.58■■■□□ 2.33
CNNM3-205ENST00000494595 ABCC9O60706 1549 aa28.61■■■□□ 2.17
CNNM3-205ENST00000494595 ZCCHC6Q5VYS8 1495 aaKnown RBP28.08■■■□□ 2.09
CNNM3-205ENST00000494595 DCAF1Q9Y4B6 1507 aa27.84■■■□□ 2.05
CNNM3-205ENST00000494595 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
CNNM3-205ENST00000494595 MYO15BQ96JP2 1530 aa27.82■■■□□ 2.04
CNNM3-205ENST00000494595 NACADO15069 1562 aa27.77■■■□□ 2.04
CNNM3-205ENST00000494595 RB1CC1Q8TDY2 1594 aa27.67■■■□□ 2.02
CNNM3-205ENST00000494595 SCRIBQ14160 1630 aa27.04■■□□□ 1.92
CNNM3-205ENST00000494595 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
CNNM3-205ENST00000494595 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
CNNM3-205ENST00000494595 PABPN1Q86U42 306 aaKnown RBP eCLIP26.84■■□□□ 1.89
CNNM3-205ENST00000494595 SHROOM4Q9ULL8 1493 aa26.75■■□□□ 1.87
CNNM3-205ENST00000494595 CECR2Q9BXF3 1484 aa26.15■■□□□ 1.78
CNNM3-205ENST00000494595 EIF4G1Q04637 1599 aaKnown RBP26.11■■□□□ 1.77
CNNM3-205ENST00000494595 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
CNNM3-205ENST00000494595 DNAJC5BQ9UF47 199 aa25.97■■□□□ 1.75
CNNM3-205ENST00000494595 SMARCA4P51532 1647 aa25.92■■□□□ 1.74
CNNM3-205ENST00000494595 MROH2BQ7Z745 1585 aa25.9■■□□□ 1.74
CNNM3-205ENST00000494595 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
CNNM3-205ENST00000494595 RSF1Q96T23 1441 aaPredicted RBP25.79■■□□□ 1.72
CNNM3-205ENST00000494595 ATAD2BQ9ULI0 1458 aa25.75■■□□□ 1.71
CNNM3-205ENST00000494595 PEG3Q9GZU2 1588 aa25.72■■□□□ 1.71
CNNM3-205ENST00000494595 NCAPD3P42695 1498 aa25.7■■□□□ 1.7
CNNM3-205ENST00000494595 SMARCA2P51531 1590 aa25.68■■□□□ 1.7
CNNM3-205ENST00000494595 WIZO95785 1651 aa25.57■■□□□ 1.68
CNNM3-205ENST00000494595 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
CNNM3-205ENST00000494595 BAZ1BQ9UIG0 1483 aaKnown RBP25.51■■□□□ 1.67
CNNM3-205ENST00000494595 SUPT5HO00267 1087 aaKnown RBP25.38■■□□□ 1.65
CNNM3-205ENST00000494595 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
CNNM3-205ENST00000494595 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
CNNM3-205ENST00000494595 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
CNNM3-205ENST00000494595 NESP48681 1621 aa24.9■■□□□ 1.58
CNNM3-205ENST00000494595 CFTRP13569 1480 aa24.89■■□□□ 1.58
CNNM3-205ENST00000494595 LAMC3Q9Y6N6 1575 aa24.86■■□□□ 1.57
CNNM3-205ENST00000494595 PDS5BQ9NTI5 1447 aa24.71■■□□□ 1.55
CNNM3-205ENST00000494595 FANCD2Q9BXW9 1451 aa24.63■■□□□ 1.53
CNNM3-205ENST00000494595 ERCC6Q03468 1493 aa24.58■■□□□ 1.53
CNNM3-205ENST00000494595 CEP164Q9UPV0 1460 aa24.53■■□□□ 1.52
CNNM3-205ENST00000494595 PRDM2Q13029 1718 aa24.53■■□□□ 1.52
CNNM3-205ENST00000494595 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
CNNM3-205ENST00000494595 MRC2Q9UBG0 1479 aa24.44■■□□□ 1.5
CNNM3-205ENST00000494595 THOC2Q8NI27 1593 aaKnown RBP24.39■■□□□ 1.5
CNNM3-205ENST00000494595 URB2Q14146 1524 aaKnown RBP24.37■■□□□ 1.49
CNNM3-205ENST00000494595 WDR62O43379 1518 aa24.34■■□□□ 1.49
CNNM3-205ENST00000494595 ABCC8Q09428 1581 aa24.29■■□□□ 1.48
CNNM3-205ENST00000494595 TOPBP1Q92547 1522 aa24.29■■□□□ 1.48
CNNM3-205ENST00000494595 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
CNNM3-205ENST00000494595 CUX1P39880 1505 aa24.26■■□□□ 1.47
CNNM3-205ENST00000494595 DNMBPQ6XZF7 1577 aa24.26■■□□□ 1.47
CNNM3-205ENST00000494595 CUX2O14529 1486 aa24.23■■□□□ 1.47
CNNM3-205ENST00000494595 SYNJ1O43426 1573 aa24.15■■□□□ 1.46
CNNM3-205ENST00000494595 TOP2BQ02880 1626 aa24.13■■□□□ 1.45
CNNM3-205ENST00000494595 POLA1P09884 1462 aaPredicted RBP24.12■■□□□ 1.45
CNNM3-205ENST00000494595 FGD5Q6ZNL6 1462 aa24.11■■□□□ 1.45
CNNM3-205ENST00000494595 BIVM-ERCC5R4GMW8 1640 aa24.1■■□□□ 1.45
CNNM3-205ENST00000494595 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
CNNM3-205ENST00000494595 SOGA1O94964 1423 aa24.02■■□□□ 1.44
CNNM3-205ENST00000494595 CHIC1Q5VXU3 224 aa24.01■■□□□ 1.43
CNNM3-205ENST00000494595 RAD54L2Q9Y4B4 1467 aa24■■□□□ 1.43
CNNM3-205ENST00000494595 TRIM41Q8WV44 630 aa23.97■■□□□ 1.43
CNNM3-205ENST00000494595 TARBP1Q13395 1621 aaKnown RBP23.96■■□□□ 1.43
CNNM3-205ENST00000494595 ABCA10Q8WWZ4 1543 aa23.92■■□□□ 1.42
CNNM3-205ENST00000494595 ZNF608Q9ULD9 1512 aaPredicted RBP23.89■■□□□ 1.42
CNNM3-205ENST00000494595 TDRD9Q8NDG6 1382 aaKnown RBP23.85■■□□□ 1.41
CNNM3-205ENST00000494595 WDR97A6NE52 1622 aa23.82■■□□□ 1.4
CNNM3-205ENST00000494595 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.43e-7■■■□□ 17
CNNM3-205ENST00000494595 EIF4G3O43432 1585 aaKnown RBP23.75■■□□□ 1.39
CNNM3-205ENST00000494595 GAPVD1Q14C86 1478 aa23.74■■□□□ 1.39
CNNM3-205ENST00000494595 ABCA5Q8WWZ7 1642 aa23.73■■□□□ 1.39
CNNM3-205ENST00000494595 KIF27Q86VH2 1401 aa23.72■■□□□ 1.39
CNNM3-205ENST00000494595 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
CNNM3-205ENST00000494595 RUSC2Q8N2Y8 1516 aa23.65■■□□□ 1.38
CNNM3-205ENST00000494595 IGF1RP08069 1367 aa23.64■■□□□ 1.37
CNNM3-205ENST00000494595 ERICH3Q5RHP9 1530 aa23.61■■□□□ 1.37
CNNM3-205ENST00000494595 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
CNNM3-205ENST00000494595 MAGI1Q96QZ7 1491 aaPredicted RBP23.57■■□□□ 1.36
CNNM3-205ENST00000494595 EEA1Q15075 1411 aa23.56■■□□□ 1.36
CNNM3-205ENST00000494595 PBRM1Q86U86 1689 aa23.54■■□□□ 1.36
CNNM3-205ENST00000494595 FHAD1B1AJZ9 1412 aa23.5■■□□□ 1.35
CNNM3-205ENST00000494595 CSRNP3Q8WYN3 585 aa23.49■■□□□ 1.35
CNNM3-205ENST00000494595 SYNJ2O15056 1496 aa23.49■■□□□ 1.35
CNNM3-205ENST00000494595 ADAMTS12P58397 1594 aa23.48■■□□□ 1.35
CNNM3-205ENST00000494595 CARMIL1Q5VZK9 1371 aa23.47■■□□□ 1.35
CNNM3-205ENST00000494595 FAM9AQ8IZU1 332 aaPredicted RBP23.43■■□□□ 1.34
CNNM3-205ENST00000494595 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
CNNM3-205ENST00000494595 PRXQ9BXM0 1461 aa23.42■■□□□ 1.34
CNNM3-205ENST00000494595 CUL7Q14999 1698 aa23.41■■□□□ 1.34
CNNM3-205ENST00000494595 FBLN2P98095 1184 aa23.39■■□□□ 1.33
CNNM3-205ENST00000494595 GRIN2AQ12879 1464 aa23.37■■□□□ 1.33
CNNM3-205ENST00000494595 RAPGEF2Q9Y4G8 1499 aa23.35■■□□□ 1.33
CNNM3-205ENST00000494595 OSCARQ8IYS5 282 aa23.32■■□□□ 1.32
CNNM3-205ENST00000494595 CHD1O14646 1710 aa23.3■■□□□ 1.32
CNNM3-205ENST00000494595 NUP160Q12769 1436 aa23.3■■□□□ 1.32
CNNM3-205ENST00000494595 KIF21BO75037 1637 aa23.23■■□□□ 1.31
CNNM3-205ENST00000494595 CEP170Q5SW79 1584 aa23.23■■□□□ 1.31
CNNM3-205ENST00000494595 CLASP1Q7Z460 1538 aa23.18■■□□□ 1.3
CNNM3-205ENST00000494595 KIAA0586Q9BVV6 1533 aa23.16■■□□□ 1.3
CNNM3-205ENST00000494595 GOLGA3Q08378 1498 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms