RNA–Protein interactions for RNA: ENST00000494586.5

CCSER2-208, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 2

Gene CCSER2, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-208ENST00000494586 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
CCSER2-208ENST00000494586 CCDC180Q9P1Z9 1646 aa18.81■□□□□ 0.6
CCSER2-208ENST00000494586 ABCC9O60706 1549 aa17.98■□□□□ 0.47
CCSER2-208ENST00000494586 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
CCSER2-208ENST00000494586 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
CCSER2-208ENST00000494586 MYO15BQ96JP2 1530 aa17.77■□□□□ 0.44
CCSER2-208ENST00000494586 NACADO15069 1562 aa17.66■□□□□ 0.42
CCSER2-208ENST00000494586 DCAF8L2P0C7V8 631 aa17.66■□□□□ 0.42
CCSER2-208ENST00000494586 RB1CC1Q8TDY2 1594 aa17.53■□□□□ 0.4
CCSER2-208ENST00000494586 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
CCSER2-208ENST00000494586 UNC13AQ9UPW8 1703 aa17.01■□□□□ 0.31
CCSER2-208ENST00000494586 SHROOM4Q9ULL8 1493 aa16.99■□□□□ 0.31
CCSER2-208ENST00000494586 BICRAQ9NZM4 1560 aa16.97■□□□□ 0.31
CCSER2-208ENST00000494586 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
CCSER2-208ENST00000494586 CECR2Q9BXF3 1484 aa16.59■□□□□ 0.25
CCSER2-208ENST00000494586 BAZ1AQ9NRL2 1556 aaPredicted RBP16.55■□□□□ 0.24
CCSER2-208ENST00000494586 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
CCSER2-208ENST00000494586 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
CCSER2-208ENST00000494586 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CCSER2-208ENST00000494586 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
CCSER2-208ENST00000494586 PEG3Q9GZU2 1588 aa16.39■□□□□ 0.21
CCSER2-208ENST00000494586 ATAD2BQ9ULI0 1458 aa16.35■□□□□ 0.21
CCSER2-208ENST00000494586 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
CCSER2-208ENST00000494586 SMARCA2P51531 1590 aa16.33■□□□□ 0.2
CCSER2-208ENST00000494586 CC2D2AQ9P2K1 1620 aa16.3■□□□□ 0.2
CCSER2-208ENST00000494586 SUPT5HO00267 1087 aaKnown RBP16.26■□□□□ 0.19
CCSER2-208ENST00000494586 WIZO95785 1651 aa16.24■□□□□ 0.19
CCSER2-208ENST00000494586 DNAJC5BQ9UF47 199 aa16.24■□□□□ 0.19
CCSER2-208ENST00000494586 HMGXB3Q12766 1538 aa16.22■□□□□ 0.19
CCSER2-208ENST00000494586 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
CCSER2-208ENST00000494586 TOP2AP11388 1531 aaKnown RBP16.15■□□□□ 0.18
CCSER2-208ENST00000494586 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
CCSER2-208ENST00000494586 CADPSQ9ULU8 1353 aa15.87■□□□□ 0.13
CCSER2-208ENST00000494586 CFTRP13569 1480 aa15.84■□□□□ 0.13
CCSER2-208ENST00000494586 LAMC3Q9Y6N6 1575 aa15.77■□□□□ 0.11
CCSER2-208ENST00000494586 PDS5BQ9NTI5 1447 aa15.69■□□□□ 0.1
CCSER2-208ENST00000494586 NESP48681 1621 aa15.68■□□□□ 0.1
CCSER2-208ENST00000494586 FANCD2Q9BXW9 1451 aa15.61■□□□□ 0.09
CCSER2-208ENST00000494586 PRDM2Q13029 1718 aa15.6■□□□□ 0.09
CCSER2-208ENST00000494586 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
CCSER2-208ENST00000494586 ABCC8Q09428 1581 aa15.52■□□□□ 0.07
CCSER2-208ENST00000494586 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
CCSER2-208ENST00000494586 ERCC6Q03468 1493 aa15.48■□□□□ 0.07
CCSER2-208ENST00000494586 CHIC1Q5VXU3 224 aa15.48■□□□□ 0.07
CCSER2-208ENST00000494586 MRC2Q9UBG0 1479 aa15.45■□□□□ 0.06
CCSER2-208ENST00000494586 KIF21AQ7Z4S6 1674 aa15.44■□□□□ 0.06
CCSER2-208ENST00000494586 TRIM41Q8WV44 630 aa15.41■□□□□ 0.06
CCSER2-208ENST00000494586 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
CCSER2-208ENST00000494586 CUX1P39880 1505 aa15.4■□□□□ 0.06
CCSER2-208ENST00000494586 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
CCSER2-208ENST00000494586 DNMBPQ6XZF7 1577 aa15.4■□□□□ 0.06
CCSER2-208ENST00000494586 TOP2BQ02880 1626 aa15.39■□□□□ 0.05
CCSER2-208ENST00000494586 WDR62O43379 1518 aa15.39■□□□□ 0.05
CCSER2-208ENST00000494586 BIVM-ERCC5R4GMW8 1640 aa15.36■□□□□ 0.05
CCSER2-208ENST00000494586 SYNJ1O43426 1573 aa15.35■□□□□ 0.05
CCSER2-208ENST00000494586 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
CCSER2-208ENST00000494586 POLA1P09884 1462 aaPredicted RBP15.29■□□□□ 0.04
CCSER2-208ENST00000494586 FGD5Q6ZNL6 1462 aa15.29■□□□□ 0.04
CCSER2-208ENST00000494586 SOGA1O94964 1423 aa15.28■□□□□ 0.04
CCSER2-208ENST00000494586 CUX2O14529 1486 aa15.27■□□□□ 0.03
CCSER2-208ENST00000494586 IFT140Q96RY7 1462 aa15.25■□□□□ 0.03
CCSER2-208ENST00000494586 ABCA10Q8WWZ4 1543 aa15.22■□□□□ 0.03
CCSER2-208ENST00000494586 RAD54L2Q9Y4B4 1467 aa15.2■□□□□ 0.02
CCSER2-208ENST00000494586 TARBP1Q13395 1621 aaKnown RBP15.19■□□□□ 0.02
CCSER2-208ENST00000494586 EEA1Q15075 1411 aa15.17■□□□□ 0.02
CCSER2-208ENST00000494586 WDR97A6NE52 1622 aa15.17■□□□□ 0.02
CCSER2-208ENST00000494586 KIF27Q86VH2 1401 aa15.17■□□□□ 0.02
CCSER2-208ENST00000494586 TDRD9Q8NDG6 1382 aaKnown RBP15.11■□□□□ 0.01
CCSER2-208ENST00000494586 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
CCSER2-208ENST00000494586 IGF1RP08069 1367 aa15.1■□□□□ 0.01
CCSER2-208ENST00000494586 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
CCSER2-208ENST00000494586 ZNF608Q9ULD9 1512 aaPredicted RBP15.07■□□□□ 0
CCSER2-208ENST00000494586 AQRO60306 1485 aaKnown RBP eCLIP15.07■□□□□ 0
CCSER2-208ENST00000494586 RUSC2Q8N2Y8 1516 aa15.07■□□□□ 0
CCSER2-208ENST00000494586 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
CCSER2-208ENST00000494586 ERICH3Q5RHP9 1530 aa15.05■□□□□ -0
CCSER2-208ENST00000494586 GRIN2BQ13224 1484 aa15.04■□□□□ -0
CCSER2-208ENST00000494586 EIF4G3O43432 1585 aaKnown RBP14.99□□□□□ -0.01
CCSER2-208ENST00000494586 PRXQ9BXM0 1461 aa14.99□□□□□ -0.01
CCSER2-208ENST00000494586 CARMIL1Q5VZK9 1371 aa14.98□□□□□ -0.01
CCSER2-208ENST00000494586 MAGI1Q96QZ7 1491 aaPredicted RBP14.97□□□□□ -0.01
CCSER2-208ENST00000494586 FAM9AQ8IZU1 332 aaPredicted RBP14.97□□□□□ -0.01
CCSER2-208ENST00000494586 FHAD1B1AJZ9 1412 aa14.96□□□□□ -0.01
CCSER2-208ENST00000494586 CUL7Q14999 1698 aa14.93□□□□□ -0.02
CCSER2-208ENST00000494586 RAPGEF2Q9Y4G8 1499 aa14.92□□□□□ -0.02
CCSER2-208ENST00000494586 PBRM1Q86U86 1689 aa14.9□□□□□ -0.02
CCSER2-208ENST00000494586 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
CCSER2-208ENST00000494586 SYNJ2O15056 1496 aa14.89□□□□□ -0.03
CCSER2-208ENST00000494586 KIF21BO75037 1637 aa14.89□□□□□ -0.03
CCSER2-208ENST00000494586 CHMP7Q8WUX9 453 aaPredicted RBP14.88□□□□□ -0.03
CCSER2-208ENST00000494586 ADAMTS12P58397 1594 aa14.87□□□□□ -0.03
CCSER2-208ENST00000494586 GOLGA3Q08378 1498 aa14.85□□□□□ -0.03
CCSER2-208ENST00000494586 GRIN2AQ12879 1464 aa14.82□□□□□ -0.04
CCSER2-208ENST00000494586 LOC105371045A0A1W2PR82 267 aa14.8□□□□□ -0.04
CCSER2-208ENST00000494586 TNIKQ9UKE5 1360 aa14.8□□□□□ -0.04
CCSER2-208ENST00000494586 NUP160Q12769 1436 aa14.79□□□□□ -0.04
CCSER2-208ENST00000494586 UBTFP17480 764 aaKnown RBP14.78□□□□□ -0.04
CCSER2-208ENST00000494586 FBLN2P98095 1184 aa14.78□□□□□ -0.04
CCSER2-208ENST00000494586 KIAA0586Q9BVV6 1533 aa14.76□□□□□ -0.05
CCSER2-208ENST00000494586 OSCARQ8IYS5 282 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms