RNA–Protein interactions for RNA: ENST00000494572.1

KRTCAP3-206, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-206ENST00000494572 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
KRTCAP3-206ENST00000494572 CCDC180Q9P1Z9 1646 aa22.08■■□□□ 1.13
KRTCAP3-206ENST00000494572 ABCC9O60706 1549 aa21.45■■□□□ 1.02
KRTCAP3-206ENST00000494572 ZCCHC6Q5VYS8 1495 aaKnown RBP21.26■□□□□ 0.99
KRTCAP3-206ENST00000494572 DCAF8L2P0C7V8 631 aa21.24■□□□□ 0.99
KRTCAP3-206ENST00000494572 DCAF1Q9Y4B6 1507 aa20.96■□□□□ 0.95
KRTCAP3-206ENST00000494572 DNAJC5BQ9UF47 199 aa20.89■□□□□ 0.93
KRTCAP3-206ENST00000494572 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
KRTCAP3-206ENST00000494572 MYO15BQ96JP2 1530 aa20.75■□□□□ 0.91
KRTCAP3-206ENST00000494572 NACADO15069 1562 aa20.69■□□□□ 0.9
KRTCAP3-206ENST00000494572 RB1CC1Q8TDY2 1594 aa20.54■□□□□ 0.88
KRTCAP3-206ENST00000494572 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
KRTCAP3-206ENST00000494572 PABPN1Q86U42 306 aaKnown RBP eCLIP20■□□□□ 0.79
KRTCAP3-206ENST00000494572 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
KRTCAP3-206ENST00000494572 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
KRTCAP3-206ENST00000494572 BICRAQ9NZM4 1560 aa19.85■□□□□ 0.77
KRTCAP3-206ENST00000494572 CECR2Q9BXF3 1484 aa19.75■□□□□ 0.75
KRTCAP3-206ENST00000494572 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
KRTCAP3-206ENST00000494572 DNAJC5Q9H3Z4 198 aa19.68■□□□□ 0.74
KRTCAP3-206ENST00000494572 MROH2BQ7Z745 1585 aa19.61■□□□□ 0.73
KRTCAP3-206ENST00000494572 BAZ1AQ9NRL2 1556 aaPredicted RBP19.61■□□□□ 0.73
KRTCAP3-206ENST00000494572 SMARCA4P51532 1647 aa19.49■□□□□ 0.71
KRTCAP3-206ENST00000494572 WIZO95785 1651 aa19.41■□□□□ 0.7
KRTCAP3-206ENST00000494572 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
KRTCAP3-206ENST00000494572 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
KRTCAP3-206ENST00000494572 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.67
KRTCAP3-206ENST00000494572 SMARCA2P51531 1590 aa19.23■□□□□ 0.67
KRTCAP3-206ENST00000494572 PEG3Q9GZU2 1588 aa19.23■□□□□ 0.67
KRTCAP3-206ENST00000494572 TOP2AP11388 1531 aaKnown RBP19.23■□□□□ 0.67
KRTCAP3-206ENST00000494572 BAZ1BQ9UIG0 1483 aaKnown RBP19.16■□□□□ 0.66
KRTCAP3-206ENST00000494572 NCAPD3P42695 1498 aa19.12■□□□□ 0.65
KRTCAP3-206ENST00000494572 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
KRTCAP3-206ENST00000494572 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
KRTCAP3-206ENST00000494572 HMGXB3Q12766 1538 aa19.02■□□□□ 0.64
KRTCAP3-206ENST00000494572 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
KRTCAP3-206ENST00000494572 CUX2O14529 1486 aa18.74■□□□□ 0.59
KRTCAP3-206ENST00000494572 CADPSQ9ULU8 1353 aa18.68■□□□□ 0.58
KRTCAP3-206ENST00000494572 CFTRP13569 1480 aa18.66■□□□□ 0.58
KRTCAP3-206ENST00000494572 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
KRTCAP3-206ENST00000494572 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
KRTCAP3-206ENST00000494572 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
KRTCAP3-206ENST00000494572 NESP48681 1621 aa18.49■□□□□ 0.55
KRTCAP3-206ENST00000494572 FAM9AQ8IZU1 332 aaPredicted RBP18.46■□□□□ 0.55
KRTCAP3-206ENST00000494572 LAMC3Q9Y6N6 1575 aa18.44■□□□□ 0.54
KRTCAP3-206ENST00000494572 FANCD2Q9BXW9 1451 aa18.44■□□□□ 0.54
KRTCAP3-206ENST00000494572 PDS5BQ9NTI5 1447 aa18.4■□□□□ 0.54
KRTCAP3-206ENST00000494572 PRDM2Q13029 1718 aa18.4■□□□□ 0.54
KRTCAP3-206ENST00000494572 SYNJ1O43426 1573 aa18.39■□□□□ 0.53
KRTCAP3-206ENST00000494572 LOC105371045A0A1W2PR82 267 aa18.34■□□□□ 0.53
KRTCAP3-206ENST00000494572 TOP2BQ02880 1626 aa18.34■□□□□ 0.53
KRTCAP3-206ENST00000494572 CUX1P39880 1505 aa18.33■□□□□ 0.53
KRTCAP3-206ENST00000494572 CEP164Q9UPV0 1460 aa18.32■□□□□ 0.52
KRTCAP3-206ENST00000494572 SOGA1O94964 1423 aa18.3■□□□□ 0.52
KRTCAP3-206ENST00000494572 BIVM-ERCC5R4GMW8 1640 aa18.28■□□□□ 0.52
KRTCAP3-206ENST00000494572 EEA1Q15075 1411 aa18.25■□□□□ 0.51
KRTCAP3-206ENST00000494572 CSRNP3Q8WYN3 585 aa18.25■□□□□ 0.51
KRTCAP3-206ENST00000494572 EHMT2Q96KQ7 1210 aa18.23■□□□□ 0.51
KRTCAP3-206ENST00000494572 RUSC2Q8N2Y8 1516 aa18.21■□□□□ 0.51
KRTCAP3-206ENST00000494572 TOPBP1Q92547 1522 aa18.2■□□□□ 0.5
KRTCAP3-206ENST00000494572 DNMBPQ6XZF7 1577 aa18.2■□□□□ 0.5
KRTCAP3-206ENST00000494572 FGD5Q6ZNL6 1462 aa18.18■□□□□ 0.5
KRTCAP3-206ENST00000494572 URB2Q14146 1524 aaKnown RBP18.17■□□□□ 0.5
KRTCAP3-206ENST00000494572 KIF21AQ7Z4S6 1674 aa18.16■□□□□ 0.5
KRTCAP3-206ENST00000494572 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
KRTCAP3-206ENST00000494572 THOC2Q8NI27 1593 aaKnown RBP18.13■□□□□ 0.49
KRTCAP3-206ENST00000494572 KIF27Q86VH2 1401 aa18.12■□□□□ 0.49
KRTCAP3-206ENST00000494572 POLA1P09884 1462 aaPredicted RBP18.09■□□□□ 0.49
KRTCAP3-206ENST00000494572 RAD54L2Q9Y4B4 1467 aa18.07■□□□□ 0.48
KRTCAP3-206ENST00000494572 UBTFP17480 764 aaKnown RBP18.05■□□□□ 0.48
KRTCAP3-206ENST00000494572 ABCA10Q8WWZ4 1543 aa18.01■□□□□ 0.47
KRTCAP3-206ENST00000494572 IGF1RP08069 1367 aa17.99■□□□□ 0.47
KRTCAP3-206ENST00000494572 GOLGA3Q08378 1498 aa17.98■□□□□ 0.47
KRTCAP3-206ENST00000494572 WDR62O43379 1518 aa17.97■□□□□ 0.47
KRTCAP3-206ENST00000494572 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
KRTCAP3-206ENST00000494572 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
KRTCAP3-206ENST00000494572 KIF21BO75037 1637 aa17.92■□□□□ 0.46
KRTCAP3-206ENST00000494572 PRXQ9BXM0 1461 aa17.92■□□□□ 0.46
KRTCAP3-206ENST00000494572 CARMIL1Q5VZK9 1371 aa17.91■□□□□ 0.46
KRTCAP3-206ENST00000494572 IFT140Q96RY7 1462 aa17.9■□□□□ 0.46
KRTCAP3-206ENST00000494572 RAPGEF2Q9Y4G8 1499 aa17.9■□□□□ 0.46
KRTCAP3-206ENST00000494572 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
KRTCAP3-206ENST00000494572 TARBP1Q13395 1621 aaKnown RBP17.87■□□□□ 0.45
KRTCAP3-206ENST00000494572 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
KRTCAP3-206ENST00000494572 AQRO60306 1485 aaKnown RBP eCLIP17.83■□□□□ 0.45
KRTCAP3-206ENST00000494572 OSCARQ8IYS5 282 aa17.83■□□□□ 0.44
KRTCAP3-206ENST00000494572 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
KRTCAP3-206ENST00000494572 CEP162Q5TB80 1403 aa17.81■□□□□ 0.44
KRTCAP3-206ENST00000494572 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
KRTCAP3-206ENST00000494572 ABCA5Q8WWZ7 1642 aa17.79■□□□□ 0.44
KRTCAP3-206ENST00000494572 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.44
KRTCAP3-206ENST00000494572 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
KRTCAP3-206ENST00000494572 CUL7Q14999 1698 aa17.73■□□□□ 0.43
KRTCAP3-206ENST00000494572 CLIP1P30622 1438 aa17.72■□□□□ 0.43
KRTCAP3-206ENST00000494572 FHAD1B1AJZ9 1412 aa17.7■□□□□ 0.42
KRTCAP3-206ENST00000494572 PBRM1Q86U86 1689 aa17.65■□□□□ 0.42
KRTCAP3-206ENST00000494572 EIF4G3O43432 1585 aaKnown RBP17.64■□□□□ 0.41
KRTCAP3-206ENST00000494572 RIMBP3CA6NJZ7 1639 aa17.63■□□□□ 0.41
KRTCAP3-206ENST00000494572 RIMBP3BA6NNM3 1639 aa17.63■□□□□ 0.41
KRTCAP3-206ENST00000494572 RIMBP3Q9UFD9 1639 aa17.63■□□□□ 0.41
KRTCAP3-206ENST00000494572 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms