RNA–Protein interactions for RNA: ENST00000494355.1

TRAF5-207, Transcript of TNF receptor associated factor 5, humanhuman

TSL 2

Gene TRAF5, Length 437 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-207ENST00000494355 NISCHQ9Y2I1 1504 aa40.31■■■■■ 4.04
TRAF5-207ENST00000494355 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
TRAF5-207ENST00000494355 ABCC9O60706 1549 aa34.91■■■■□ 3.18
TRAF5-207ENST00000494355 DCAF8L2P0C7V8 631 aa33.75■■■□□ 2.99
TRAF5-207ENST00000494355 RB1CC1Q8TDY2 1594 aa33.65■■■□□ 2.98
TRAF5-207ENST00000494355 NACADO15069 1562 aa33.64■■■□□ 2.98
TRAF5-207ENST00000494355 ZCCHC6Q5VYS8 1495 aaKnown RBP33.59■■■□□ 2.97
TRAF5-207ENST00000494355 MYO15BQ96JP2 1530 aa33.47■■■□□ 2.95
TRAF5-207ENST00000494355 DCAF1Q9Y4B6 1507 aa33.36■■■□□ 2.93
TRAF5-207ENST00000494355 UNC13AQ9UPW8 1703 aa32.76■■■□□ 2.83
TRAF5-207ENST00000494355 PABPN1Q86U42 306 aaKnown RBP eCLIP32.66■■■□□ 2.82
TRAF5-207ENST00000494355 SCRIBQ14160 1630 aa32.66■■■□□ 2.82
TRAF5-207ENST00000494355 BICRAQ9NZM4 1560 aa32.54■■■□□ 2.8
TRAF5-207ENST00000494355 SHROOM4Q9ULL8 1493 aa32.3■■■□□ 2.76
TRAF5-207ENST00000494355 DNAJC5BQ9UF47 199 aa31.9■■■□□ 2.7
TRAF5-207ENST00000494355 EIF4G1Q04637 1599 aaKnown RBP31.72■■■□□ 2.67
TRAF5-207ENST00000494355 CC2D2AQ9P2K1 1620 aa31.56■■■□□ 2.64
TRAF5-207ENST00000494355 CECR2Q9BXF3 1484 aa31.37■■■□□ 2.61
TRAF5-207ENST00000494355 BAZ1AQ9NRL2 1556 aaPredicted RBP31.26■■■□□ 2.59
TRAF5-207ENST00000494355 SMARCA4P51532 1647 aa31.24■■■□□ 2.59
TRAF5-207ENST00000494355 ATAD2BQ9ULI0 1458 aa31.06■■■□□ 2.56
TRAF5-207ENST00000494355 SMARCA2P51531 1590 aa31.05■■■□□ 2.56
TRAF5-207ENST00000494355 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
TRAF5-207ENST00000494355 NCAPD3P42695 1498 aa31.03■■■□□ 2.56
TRAF5-207ENST00000494355 PEG3Q9GZU2 1588 aa30.92■■■□□ 2.54
TRAF5-207ENST00000494355 HMGXB3Q12766 1538 aa30.88■■■□□ 2.53
TRAF5-207ENST00000494355 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
TRAF5-207ENST00000494355 RSF1Q96T23 1441 aaPredicted RBP30.76■■■□□ 2.51
TRAF5-207ENST00000494355 WIZO95785 1651 aa30.71■■■□□ 2.51
TRAF5-207ENST00000494355 TOP2AP11388 1531 aaKnown RBP30.42■■■□□ 2.46
TRAF5-207ENST00000494355 NESP48681 1621 aa30.21■■■□□ 2.43
TRAF5-207ENST00000494355 LAMC3Q9Y6N6 1575 aa30.2■■■□□ 2.42
TRAF5-207ENST00000494355 CADPSQ9ULU8 1353 aa30.16■■■□□ 2.42
TRAF5-207ENST00000494355 SUPT5HO00267 1087 aaKnown RBP30.16■■■□□ 2.42
TRAF5-207ENST00000494355 ERCC6Q03468 1493 aa30.14■■■□□ 2.42
TRAF5-207ENST00000494355 CCDC88BA6NC98 1476 aa30.07■■■□□ 2.4
TRAF5-207ENST00000494355 PDS5BQ9NTI5 1447 aa30.05■■■□□ 2.4
TRAF5-207ENST00000494355 CFTRP13569 1480 aa29.98■■■□□ 2.39
TRAF5-207ENST00000494355 KIF21AQ7Z4S6 1674 aa29.84■■■□□ 2.37
TRAF5-207ENST00000494355 FANCD2Q9BXW9 1451 aa29.8■■■□□ 2.36
TRAF5-207ENST00000494355 CEP164Q9UPV0 1460 aa29.76■■■□□ 2.35
TRAF5-207ENST00000494355 CUX2O14529 1486 aa29.74■■■□□ 2.35
TRAF5-207ENST00000494355 THOC2Q8NI27 1593 aaKnown RBP29.71■■■□□ 2.35
TRAF5-207ENST00000494355 PRDM2Q13029 1718 aa29.7■■■□□ 2.34
TRAF5-207ENST00000494355 MRC2Q9UBG0 1479 aa29.68■■■□□ 2.34
TRAF5-207ENST00000494355 WDR62O43379 1518 aa29.55■■■□□ 2.32
TRAF5-207ENST00000494355 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.31
TRAF5-207ENST00000494355 ABCC8Q09428 1581 aa29.39■■■□□ 2.29
TRAF5-207ENST00000494355 TOPBP1Q92547 1522 aa29.32■■■□□ 2.28
TRAF5-207ENST00000494355 DNMBPQ6XZF7 1577 aa29.3■■■□□ 2.28
TRAF5-207ENST00000494355 DNAJC5Q9H3Z4 198 aa29.28■■■□□ 2.28
TRAF5-207ENST00000494355 IFT140Q96RY7 1462 aa29.14■■■□□ 2.26
TRAF5-207ENST00000494355 CUX1P39880 1505 aa29.12■■■□□ 2.25
TRAF5-207ENST00000494355 POLA1P09884 1462 aaPredicted RBP29.07■■■□□ 2.24
TRAF5-207ENST00000494355 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
TRAF5-207ENST00000494355 FGD5Q6ZNL6 1462 aa29.03■■■□□ 2.24
TRAF5-207ENST00000494355 SOGA1O94964 1423 aa29.01■■■□□ 2.23
TRAF5-207ENST00000494355 RAD54L2Q9Y4B4 1467 aa28.95■■■□□ 2.22
TRAF5-207ENST00000494355 TARBP1Q13395 1621 aaKnown RBP28.94■■■□□ 2.22
TRAF5-207ENST00000494355 ZNF608Q9ULD9 1512 aaPredicted RBP28.94■■■□□ 2.22
TRAF5-207ENST00000494355 TOP2BQ02880 1626 aa28.91■■■□□ 2.22
TRAF5-207ENST00000494355 BIVM-ERCC5R4GMW8 1640 aa28.9■■■□□ 2.22
TRAF5-207ENST00000494355 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
TRAF5-207ENST00000494355 EIF4G3O43432 1585 aaKnown RBP28.84■■■□□ 2.21
TRAF5-207ENST00000494355 AQRO60306 1485 aaKnown RBP eCLIP28.83■■■□□ 2.21
TRAF5-207ENST00000494355 TDRD9Q8NDG6 1382 aaKnown RBP28.81■■■□□ 2.2
TRAF5-207ENST00000494355 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
TRAF5-207ENST00000494355 ABCA10Q8WWZ4 1543 aa28.76■■■□□ 2.19
TRAF5-207ENST00000494355 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
TRAF5-207ENST00000494355 GRIN2BQ13224 1484 aa28.65■■■□□ 2.18
TRAF5-207ENST00000494355 ABCA5Q8WWZ7 1642 aa28.59■■■□□ 2.17
TRAF5-207ENST00000494355 OSCARQ8IYS5 282 aa28.59■■■□□ 2.17
TRAF5-207ENST00000494355 SNAPC4Q5SXM2 1469 aa28.56■■■□□ 2.16
TRAF5-207ENST00000494355 MAGI1Q96QZ7 1491 aaPredicted RBP28.55■■■□□ 2.16
TRAF5-207ENST00000494355 FBLN2P98095 1184 aa28.55■■■□□ 2.16
TRAF5-207ENST00000494355 PBRM1Q86U86 1689 aa28.53■■■□□ 2.16
TRAF5-207ENST00000494355 TRIM41Q8WV44 630 aa28.5■■■□□ 2.15
TRAF5-207ENST00000494355 CHMP7Q8WUX9 453 aaPredicted RBP28.49■■■□□ 2.15
TRAF5-207ENST00000494355 KIF27Q86VH2 1401 aa28.44■■■□□ 2.14
TRAF5-207ENST00000494355 SYNJ2O15056 1496 aa28.43■■■□□ 2.14
TRAF5-207ENST00000494355 ERICH3Q5RHP9 1530 aa28.43■■■□□ 2.14
TRAF5-207ENST00000494355 CHD1O14646 1710 aa28.42■■■□□ 2.14
TRAF5-207ENST00000494355 FHAD1B1AJZ9 1412 aa28.35■■■□□ 2.13
TRAF5-207ENST00000494355 ADAMTS12P58397 1594 aa28.33■■■□□ 2.12
TRAF5-207ENST00000494355 IGF1RP08069 1367 aa28.27■■■□□ 2.12
TRAF5-207ENST00000494355 GRIN2AQ12879 1464 aa28.26■■■□□ 2.11
TRAF5-207ENST00000494355 CUL7Q14999 1698 aa28.19■■■□□ 2.1
TRAF5-207ENST00000494355 CHIC1Q5VXU3 224 aa28.17■■■□□ 2.1
TRAF5-207ENST00000494355 CARMIL1Q5VZK9 1371 aa28.14■■■□□ 2.1
TRAF5-207ENST00000494355 CLASP1Q7Z460 1538 aa28.13■■■□□ 2.09
TRAF5-207ENST00000494355 RUSC2Q8N2Y8 1516 aa28.13■■■□□ 2.09
TRAF5-207ENST00000494355 NUP160Q12769 1436 aa28.11■■■□□ 2.09
TRAF5-207ENST00000494355 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
TRAF5-207ENST00000494355 ARHGEF11O15085 1522 aa28.04■■■□□ 2.08
TRAF5-207ENST00000494355 RIMBP3CA6NJZ7 1639 aa28.01■■■□□ 2.07
TRAF5-207ENST00000494355 RIMBP3BA6NNM3 1639 aa28.01■■■□□ 2.07
TRAF5-207ENST00000494355 RIMBP3Q9UFD9 1639 aa28.01■■■□□ 2.07
TRAF5-207ENST00000494355 EEA1Q15075 1411 aa28■■■□□ 2.07
TRAF5-207ENST00000494355 RAPGEF2Q9Y4G8 1499 aa27.98■■■□□ 2.07
TRAF5-207ENST00000494355 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms