RNA–Protein interactions for RNA: ENST00000494155.1

C1orf50-203, Transcript of chromosome 1 open reading frame 50, humanhuman

TSL 3

Gene C1orf50, Length 497 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf50-203ENST00000494155 NISCHQ9Y2I1 1504 aa22.67■■□□□ 1.22
C1orf50-203ENST00000494155 CCDC180Q9P1Z9 1646 aa20.04■□□□□ 0.8
C1orf50-203ENST00000494155 ABCC9O60706 1549 aa19.83■□□□□ 0.77
C1orf50-203ENST00000494155 DCAF8L2P0C7V8 631 aa19.25■□□□□ 0.67
C1orf50-203ENST00000494155 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
C1orf50-203ENST00000494155 NACADO15069 1562 aa18.92■□□□□ 0.62
C1orf50-203ENST00000494155 ZCCHC6Q5VYS8 1495 aaKnown RBP18.84■□□□□ 0.61
C1orf50-203ENST00000494155 MYO15BQ96JP2 1530 aa18.74■□□□□ 0.59
C1orf50-203ENST00000494155 DCAF1Q9Y4B6 1507 aa18.67■□□□□ 0.58
C1orf50-203ENST00000494155 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.57
C1orf50-203ENST00000494155 UNC13AQ9UPW8 1703 aa18.46■□□□□ 0.55
C1orf50-203ENST00000494155 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
C1orf50-203ENST00000494155 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
C1orf50-203ENST00000494155 DNAJC5BQ9UF47 199 aa18.27■□□□□ 0.52
C1orf50-203ENST00000494155 SHROOM4Q9ULL8 1493 aa18.12■□□□□ 0.49
C1orf50-203ENST00000494155 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
C1orf50-203ENST00000494155 CC2D2AQ9P2K1 1620 aa17.86■□□□□ 0.45
C1orf50-203ENST00000494155 CECR2Q9BXF3 1484 aa17.79■□□□□ 0.44
C1orf50-203ENST00000494155 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
C1orf50-203ENST00000494155 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
C1orf50-203ENST00000494155 ATAD2BQ9ULI0 1458 aa17.52■□□□□ 0.4
C1orf50-203ENST00000494155 MROH2BQ7Z745 1585 aa17.5■□□□□ 0.39
C1orf50-203ENST00000494155 NCAPD3P42695 1498 aa17.5■□□□□ 0.39
C1orf50-203ENST00000494155 SMARCA2P51531 1590 aa17.46■□□□□ 0.39
C1orf50-203ENST00000494155 BAZ1BQ9UIG0 1483 aaKnown RBP17.39■□□□□ 0.37
C1orf50-203ENST00000494155 HMGXB3Q12766 1538 aa17.35■□□□□ 0.37
C1orf50-203ENST00000494155 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.37
C1orf50-203ENST00000494155 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
C1orf50-203ENST00000494155 WIZO95785 1651 aa17.3■□□□□ 0.36
C1orf50-203ENST00000494155 NESP48681 1621 aa17.14■□□□□ 0.33
C1orf50-203ENST00000494155 ERCC6Q03468 1493 aa17.1■□□□□ 0.33
C1orf50-203ENST00000494155 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
C1orf50-203ENST00000494155 SUPT5HO00267 1087 aaKnown RBP17.08■□□□□ 0.32
C1orf50-203ENST00000494155 CADPSQ9ULU8 1353 aa17.03■□□□□ 0.32
C1orf50-203ENST00000494155 LAMC3Q9Y6N6 1575 aa16.99■□□□□ 0.31
C1orf50-203ENST00000494155 PDS5BQ9NTI5 1447 aa16.97■□□□□ 0.31
C1orf50-203ENST00000494155 CCDC88BA6NC98 1476 aa16.96■□□□□ 0.31
C1orf50-203ENST00000494155 CFTRP13569 1480 aa16.88■□□□□ 0.29
C1orf50-203ENST00000494155 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
C1orf50-203ENST00000494155 FANCD2Q9BXW9 1451 aa16.83■□□□□ 0.28
C1orf50-203ENST00000494155 CUX2O14529 1486 aa16.82■□□□□ 0.28
C1orf50-203ENST00000494155 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
C1orf50-203ENST00000494155 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
C1orf50-203ENST00000494155 THOC2Q8NI27 1593 aaKnown RBP16.76■□□□□ 0.27
C1orf50-203ENST00000494155 WDR62O43379 1518 aa16.65■□□□□ 0.26
C1orf50-203ENST00000494155 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
C1orf50-203ENST00000494155 PRDM2Q13029 1718 aa16.62■□□□□ 0.25
C1orf50-203ENST00000494155 TOPBP1Q92547 1522 aa16.54■□□□□ 0.24
C1orf50-203ENST00000494155 ABCC8Q09428 1581 aa16.51■□□□□ 0.23
C1orf50-203ENST00000494155 DNMBPQ6XZF7 1577 aa16.48■□□□□ 0.23
C1orf50-203ENST00000494155 IFT140Q96RY7 1462 aa16.43■□□□□ 0.22
C1orf50-203ENST00000494155 DNAJC5Q9H3Z4 198 aa16.43■□□□□ 0.22
C1orf50-203ENST00000494155 CUX1P39880 1505 aa16.4■□□□□ 0.22
C1orf50-203ENST00000494155 SOGA1O94964 1423 aa16.4■□□□□ 0.22
C1orf50-203ENST00000494155 POLA1P09884 1462 aaPredicted RBP16.4■□□□□ 0.22
C1orf50-203ENST00000494155 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
C1orf50-203ENST00000494155 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
C1orf50-203ENST00000494155 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
C1orf50-203ENST00000494155 AQRO60306 1485 aaKnown RBP eCLIP16.35■□□□□ 0.21
C1orf50-203ENST00000494155 TDRD9Q8NDG6 1382 aaKnown RBP16.35■□□□□ 0.21
C1orf50-203ENST00000494155 WRNQ14191 1432 aaPredicted RBP eCLIP16.34■□□□□ 0.21
C1orf50-203ENST00000494155 TARBP1Q13395 1621 aaKnown RBP16.3■□□□□ 0.2
C1orf50-203ENST00000494155 FBLN2P98095 1184 aa16.29■□□□□ 0.2
C1orf50-203ENST00000494155 OSCARQ8IYS5 282 aa16.28■□□□□ 0.2
C1orf50-203ENST00000494155 SYNJ1O43426 1573 aa16.25■□□□□ 0.19
C1orf50-203ENST00000494155 EIF4G3O43432 1585 aaKnown RBP16.25■□□□□ 0.19
C1orf50-203ENST00000494155 TOP2BQ02880 1626 aa16.23■□□□□ 0.19
C1orf50-203ENST00000494155 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
C1orf50-203ENST00000494155 CHMP7Q8WUX9 453 aaPredicted RBP16.18■□□□□ 0.18
C1orf50-203ENST00000494155 ABCA10Q8WWZ4 1543 aa16.18■□□□□ 0.18
C1orf50-203ENST00000494155 GAPVD1Q14C86 1478 aa16.17■□□□□ 0.18
C1orf50-203ENST00000494155 GRIN2BQ13224 1484 aa16.16■□□□□ 0.18
C1orf50-203ENST00000494155 SNAPC4Q5SXM2 1469 aa16.15■□□□□ 0.18
C1orf50-203ENST00000494155 WDR97A6NE52 1622 aa16.1■□□□□ 0.17
C1orf50-203ENST00000494155 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
C1orf50-203ENST00000494155 MAGI1Q96QZ7 1491 aaPredicted RBP16.08■□□□□ 0.16
C1orf50-203ENST00000494155 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
C1orf50-203ENST00000494155 CHD1O14646 1710 aa16.05■□□□□ 0.16
C1orf50-203ENST00000494155 PBRM1Q86U86 1689 aa16.04■□□□□ 0.16
C1orf50-203ENST00000494155 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
C1orf50-203ENST00000494155 KIF27Q86VH2 1401 aa16.01■□□□□ 0.15
C1orf50-203ENST00000494155 FHAD1B1AJZ9 1412 aa15.98■□□□□ 0.15
C1orf50-203ENST00000494155 ERICH3Q5RHP9 1530 aa15.97■□□□□ 0.15
C1orf50-203ENST00000494155 IGF1RP08069 1367 aa15.97■□□□□ 0.15
C1orf50-203ENST00000494155 GRIN2AQ12879 1464 aa15.93■□□□□ 0.14
C1orf50-203ENST00000494155 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
C1orf50-203ENST00000494155 CYB5RLQ6IPT4 315 aa15.92■□□□□ 0.14
C1orf50-203ENST00000494155 ARHGEF11O15085 1522 aa15.89■□□□□ 0.13
C1orf50-203ENST00000494155 RUSC2Q8N2Y8 1516 aa15.89■□□□□ 0.13
C1orf50-203ENST00000494155 CARMIL1Q5VZK9 1371 aa15.88■□□□□ 0.13
C1orf50-203ENST00000494155 RIMBP3CA6NJZ7 1639 aa15.87■□□□□ 0.13
C1orf50-203ENST00000494155 RIMBP3BA6NNM3 1639 aa15.87■□□□□ 0.13
C1orf50-203ENST00000494155 RIMBP3Q9UFD9 1639 aa15.87■□□□□ 0.13
C1orf50-203ENST00000494155 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
C1orf50-203ENST00000494155 CHIC1Q5VXU3 224 aa15.86■□□□□ 0.13
C1orf50-203ENST00000494155 NUP160Q12769 1436 aa15.85■□□□□ 0.13
C1orf50-203ENST00000494155 CEP170Q5SW79 1584 aa15.83■□□□□ 0.13
C1orf50-203ENST00000494155 FAM9AQ8IZU1 332 aaPredicted RBP15.82■□□□□ 0.12
C1orf50-203ENST00000494155 JPH4Q96JJ6 628 aa15.82■□□□□ 0.12
C1orf50-203ENST00000494155 CUL7Q14999 1698 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms