RNA–Protein interactions for RNA: ENST00000494109.1

PATZ1-206, Transcript of POZ/BTB and AT hook containing zinc finger 1, humanhuman

TSL 2

Gene PATZ1, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATZ1-206ENST00000494109 NISCHQ9Y2I1 1504 aa28.14■■■□□ 2.1
PATZ1-206ENST00000494109 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
PATZ1-206ENST00000494109 ABCC9O60706 1549 aa24.4■■□□□ 1.5
PATZ1-206ENST00000494109 DCAF8L2P0C7V8 631 aa23.67■■□□□ 1.38
PATZ1-206ENST00000494109 RB1CC1Q8TDY2 1594 aa23.56■■□□□ 1.36
PATZ1-206ENST00000494109 NACADO15069 1562 aa23.53■■□□□ 1.36
PATZ1-206ENST00000494109 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
PATZ1-206ENST00000494109 MYO15BQ96JP2 1530 aa23.38■■□□□ 1.33
PATZ1-206ENST00000494109 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
PATZ1-206ENST00000494109 UNC13AQ9UPW8 1703 aa22.86■■□□□ 1.25
PATZ1-206ENST00000494109 PABPN1Q86U42 306 aaKnown RBP eCLIP22.82■■□□□ 1.24
PATZ1-206ENST00000494109 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
PATZ1-206ENST00000494109 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
PATZ1-206ENST00000494109 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
PATZ1-206ENST00000494109 DNAJC5BQ9UF47 199 aa22.21■■□□□ 1.15
PATZ1-206ENST00000494109 EIF4G1Q04637 1599 aaKnown RBP22.15■■□□□ 1.14
PATZ1-206ENST00000494109 CC2D2AQ9P2K1 1620 aa22.04■■□□□ 1.12
PATZ1-206ENST00000494109 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
PATZ1-206ENST00000494109 BAZ1AQ9NRL2 1556 aaPredicted RBP21.87■■□□□ 1.09
PATZ1-206ENST00000494109 SMARCA4P51532 1647 aa21.81■■□□□ 1.08
PATZ1-206ENST00000494109 SMARCA2P51531 1590 aa21.74■■□□□ 1.07
PATZ1-206ENST00000494109 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
PATZ1-206ENST00000494109 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
PATZ1-206ENST00000494109 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
PATZ1-206ENST00000494109 PEG3Q9GZU2 1588 aa21.58■■□□□ 1.05
PATZ1-206ENST00000494109 HMGXB3Q12766 1538 aa21.58■■□□□ 1.04
PATZ1-206ENST00000494109 BAZ1BQ9UIG0 1483 aaKnown RBP21.58■■□□□ 1.04
PATZ1-206ENST00000494109 RSF1Q96T23 1441 aaPredicted RBP21.46■■□□□ 1.03
PATZ1-206ENST00000494109 WIZO95785 1651 aa21.43■■□□□ 1.02
PATZ1-206ENST00000494109 TOP2AP11388 1531 aaKnown RBP21.25■□□□□ 0.99
PATZ1-206ENST00000494109 ERCC6Q03468 1493 aa21.13■□□□□ 0.97
PATZ1-206ENST00000494109 LAMC3Q9Y6N6 1575 aa21.12■□□□□ 0.97
PATZ1-206ENST00000494109 SUPT5HO00267 1087 aaKnown RBP21.12■□□□□ 0.97
PATZ1-206ENST00000494109 CADPSQ9ULU8 1353 aa21.09■□□□□ 0.97
PATZ1-206ENST00000494109 NESP48681 1621 aa21.07■□□□□ 0.96
PATZ1-206ENST00000494109 PDS5BQ9NTI5 1447 aa21.04■□□□□ 0.96
PATZ1-206ENST00000494109 CCDC88BA6NC98 1476 aa20.99■□□□□ 0.95
PATZ1-206ENST00000494109 CFTRP13569 1480 aa20.94■□□□□ 0.94
PATZ1-206ENST00000494109 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
PATZ1-206ENST00000494109 FANCD2Q9BXW9 1451 aa20.83■□□□□ 0.93
PATZ1-206ENST00000494109 CEP164Q9UPV0 1460 aa20.83■□□□□ 0.93
PATZ1-206ENST00000494109 CUX2O14529 1486 aa20.82■□□□□ 0.92
PATZ1-206ENST00000494109 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
PATZ1-206ENST00000494109 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
PATZ1-206ENST00000494109 THOC2Q8NI27 1593 aaKnown RBP20.72■□□□□ 0.91
PATZ1-206ENST00000494109 WDR62O43379 1518 aa20.63■□□□□ 0.89
PATZ1-206ENST00000494109 ABCC8Q09428 1581 aa20.6■□□□□ 0.89
PATZ1-206ENST00000494109 URB2Q14146 1524 aaKnown RBP20.55■□□□□ 0.88
PATZ1-206ENST00000494109 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
PATZ1-206ENST00000494109 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
PATZ1-206ENST00000494109 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
PATZ1-206ENST00000494109 CUX1P39880 1505 aa20.32■□□□□ 0.84
PATZ1-206ENST00000494109 WRNQ14191 1432 aaPredicted RBP eCLIP20.31■□□□□ 0.84
PATZ1-206ENST00000494109 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
PATZ1-206ENST00000494109 SOGA1O94964 1423 aa20.29■□□□□ 0.84
PATZ1-206ENST00000494109 FGD5Q6ZNL6 1462 aa20.28■□□□□ 0.84
PATZ1-206ENST00000494109 TOP2BQ02880 1626 aa20.2■□□□□ 0.82
PATZ1-206ENST00000494109 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
PATZ1-206ENST00000494109 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
PATZ1-206ENST00000494109 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
PATZ1-206ENST00000494109 BIVM-ERCC5R4GMW8 1640 aa20.18■□□□□ 0.82
PATZ1-206ENST00000494109 WDR97A6NE52 1622 aa20.15■□□□□ 0.82
PATZ1-206ENST00000494109 SYNJ1O43426 1573 aa20.14■□□□□ 0.81
PATZ1-206ENST00000494109 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
PATZ1-206ENST00000494109 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.81
PATZ1-206ENST00000494109 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
PATZ1-206ENST00000494109 ABCA10Q8WWZ4 1543 aa20.1■□□□□ 0.81
PATZ1-206ENST00000494109 DNAJC5Q9H3Z4 198 aa20.08■□□□□ 0.81
PATZ1-206ENST00000494109 GAPVD1Q14C86 1478 aa20.05■□□□□ 0.8
PATZ1-206ENST00000494109 OSCARQ8IYS5 282 aa20.05■□□□□ 0.8
PATZ1-206ENST00000494109 GRIN2BQ13224 1484 aa20.05■□□□□ 0.8
PATZ1-206ENST00000494109 FBLN2P98095 1184 aa20.02■□□□□ 0.8
PATZ1-206ENST00000494109 MAGI1Q96QZ7 1491 aaPredicted RBP19.99■□□□□ 0.79
PATZ1-206ENST00000494109 CHMP7Q8WUX9 453 aaPredicted RBP19.98■□□□□ 0.79
PATZ1-206ENST00000494109 TRIM41Q8WV44 630 aa19.98■□□□□ 0.79
PATZ1-206ENST00000494109 ABCA5Q8WWZ7 1642 aa19.96■□□□□ 0.79
PATZ1-206ENST00000494109 SNAPC4Q5SXM2 1469 aa19.96■□□□□ 0.79
PATZ1-206ENST00000494109 PBRM1Q86U86 1689 aa19.94■□□□□ 0.78
PATZ1-206ENST00000494109 KIF27Q86VH2 1401 aa19.93■□□□□ 0.78
PATZ1-206ENST00000494109 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
PATZ1-206ENST00000494109 ERICH3Q5RHP9 1530 aa19.88■□□□□ 0.77
PATZ1-206ENST00000494109 CHD1O14646 1710 aa19.86■□□□□ 0.77
PATZ1-206ENST00000494109 FHAD1B1AJZ9 1412 aa19.84■□□□□ 0.77
PATZ1-206ENST00000494109 ADAMTS12P58397 1594 aa19.78■□□□□ 0.76
PATZ1-206ENST00000494109 GRIN2AQ12879 1464 aa19.75■□□□□ 0.75
PATZ1-206ENST00000494109 IGF1RP08069 1367 aa19.74■□□□□ 0.75
PATZ1-206ENST00000494109 CUL7Q14999 1698 aa19.73■□□□□ 0.75
PATZ1-206ENST00000494109 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
PATZ1-206ENST00000494109 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
PATZ1-206ENST00000494109 CLASP1Q7Z460 1538 aa19.63■□□□□ 0.73
PATZ1-206ENST00000494109 NUP160Q12769 1436 aa19.63■□□□□ 0.73
PATZ1-206ENST00000494109 EEA1Q15075 1411 aa19.62■□□□□ 0.73
PATZ1-206ENST00000494109 ARHGEF11O15085 1522 aa19.6■□□□□ 0.73
PATZ1-206ENST00000494109 RUSC2Q8N2Y8 1516 aa19.6■□□□□ 0.73
PATZ1-206ENST00000494109 CEP170Q5SW79 1584 aa19.58■□□□□ 0.73
PATZ1-206ENST00000494109 RAPGEF2Q9Y4G8 1499 aa19.58■□□□□ 0.72
PATZ1-206ENST00000494109 CSRNP3Q8WYN3 585 aa19.57■□□□□ 0.72
PATZ1-206ENST00000494109 RIMBP3CA6NJZ7 1639 aa19.57■□□□□ 0.72
PATZ1-206ENST00000494109 RIMBP3BA6NNM3 1639 aa19.57■□□□□ 0.72
PATZ1-206ENST00000494109 RIMBP3Q9UFD9 1639 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms