RNA–Protein interactions for RNA: ENST00000494012.1

MACF1-222, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 4

Gene MACF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-222ENST00000494012 NISCHQ9Y2I1 1504 aa24.11■■□□□ 1.45
MACF1-222ENST00000494012 CCDC180Q9P1Z9 1646 aa21.5■■□□□ 1.03
MACF1-222ENST00000494012 ABCC9O60706 1549 aa20.8■□□□□ 0.92
MACF1-222ENST00000494012 RB1CC1Q8TDY2 1594 aa20.14■□□□□ 0.81
MACF1-222ENST00000494012 NACADO15069 1562 aa20.13■□□□□ 0.81
MACF1-222ENST00000494012 ZCCHC6Q5VYS8 1495 aaKnown RBP20.12■□□□□ 0.81
MACF1-222ENST00000494012 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
MACF1-222ENST00000494012 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
MACF1-222ENST00000494012 DCAF1Q9Y4B6 1507 aa20■□□□□ 0.79
MACF1-222ENST00000494012 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
MACF1-222ENST00000494012 SCRIBQ14160 1630 aa19.54■□□□□ 0.72
MACF1-222ENST00000494012 BICRAQ9NZM4 1560 aa19.48■□□□□ 0.71
MACF1-222ENST00000494012 PABPN1Q86U42 306 aaKnown RBP eCLIP19.39■□□□□ 0.69
MACF1-222ENST00000494012 SHROOM4Q9ULL8 1493 aa19.37■□□□□ 0.69
MACF1-222ENST00000494012 DNAJC5BQ9UF47 199 aa19.37■□□□□ 0.69
MACF1-222ENST00000494012 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
MACF1-222ENST00000494012 CC2D2AQ9P2K1 1620 aa18.87■□□□□ 0.61
MACF1-222ENST00000494012 BAZ1AQ9NRL2 1556 aaPredicted RBP18.72■□□□□ 0.59
MACF1-222ENST00000494012 SMARCA4P51532 1647 aa18.72■□□□□ 0.59
MACF1-222ENST00000494012 CECR2Q9BXF3 1484 aa18.71■□□□□ 0.59
MACF1-222ENST00000494012 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
MACF1-222ENST00000494012 MROH2BQ7Z745 1585 aa18.56■□□□□ 0.56
MACF1-222ENST00000494012 PEG3Q9GZU2 1588 aa18.55■□□□□ 0.56
MACF1-222ENST00000494012 ATAD2BQ9ULI0 1458 aa18.54■□□□□ 0.56
MACF1-222ENST00000494012 NCAPD3P42695 1498 aa18.52■□□□□ 0.56
MACF1-222ENST00000494012 HMGXB3Q12766 1538 aa18.5■□□□□ 0.55
MACF1-222ENST00000494012 BAZ1BQ9UIG0 1483 aaKnown RBP18.43■□□□□ 0.54
MACF1-222ENST00000494012 WIZO95785 1651 aa18.4■□□□□ 0.54
MACF1-222ENST00000494012 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
MACF1-222ENST00000494012 TOP2AP11388 1531 aaKnown RBP18.23■□□□□ 0.51
MACF1-222ENST00000494012 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.49
MACF1-222ENST00000494012 NESP48681 1621 aa18.01■□□□□ 0.47
MACF1-222ENST00000494012 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
MACF1-222ENST00000494012 CADPSQ9ULU8 1353 aa17.97■□□□□ 0.47
MACF1-222ENST00000494012 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
MACF1-222ENST00000494012 DNAJC5Q9H3Z4 198 aa17.95■□□□□ 0.46
MACF1-222ENST00000494012 SUPT5HO00267 1087 aaKnown RBP17.94■□□□□ 0.46
MACF1-222ENST00000494012 PRDM2Q13029 1718 aa17.92■□□□□ 0.46
MACF1-222ENST00000494012 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
MACF1-222ENST00000494012 CFTRP13569 1480 aa17.91■□□□□ 0.46
MACF1-222ENST00000494012 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
MACF1-222ENST00000494012 THOC2Q8NI27 1593 aaKnown RBP17.8■□□□□ 0.44
MACF1-222ENST00000494012 FANCD2Q9BXW9 1451 aa17.79■□□□□ 0.44
MACF1-222ENST00000494012 CEP164Q9UPV0 1460 aa17.79■□□□□ 0.44
MACF1-222ENST00000494012 CUX2O14529 1486 aa17.75■□□□□ 0.43
MACF1-222ENST00000494012 MRC2Q9UBG0 1479 aa17.74■□□□□ 0.43
MACF1-222ENST00000494012 WDR62O43379 1518 aa17.69■□□□□ 0.42
MACF1-222ENST00000494012 URB2Q14146 1524 aaKnown RBP17.59■□□□□ 0.41
MACF1-222ENST00000494012 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
MACF1-222ENST00000494012 DNMBPQ6XZF7 1577 aa17.55■□□□□ 0.4
MACF1-222ENST00000494012 TOPBP1Q92547 1522 aa17.52■□□□□ 0.4
MACF1-222ENST00000494012 CUX1P39880 1505 aa17.42■□□□□ 0.38
MACF1-222ENST00000494012 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
MACF1-222ENST00000494012 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
MACF1-222ENST00000494012 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
MACF1-222ENST00000494012 WRNQ14191 1432 aaPredicted RBP eCLIP17.36■□□□□ 0.37
MACF1-222ENST00000494012 FGD5Q6ZNL6 1462 aa17.36■□□□□ 0.37
MACF1-222ENST00000494012 TOP2BQ02880 1626 aa17.35■□□□□ 0.37
MACF1-222ENST00000494012 TARBP1Q13395 1621 aaKnown RBP17.35■□□□□ 0.37
MACF1-222ENST00000494012 SYNJ1O43426 1573 aa17.32■□□□□ 0.36
MACF1-222ENST00000494012 EIF4G3O43432 1585 aaKnown RBP17.29■□□□□ 0.36
MACF1-222ENST00000494012 SOGA1O94964 1423 aa17.29■□□□□ 0.36
MACF1-222ENST00000494012 WDR97A6NE52 1622 aa17.29■□□□□ 0.36
MACF1-222ENST00000494012 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
MACF1-222ENST00000494012 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
MACF1-222ENST00000494012 ABCA10Q8WWZ4 1543 aa17.2■□□□□ 0.34
MACF1-222ENST00000494012 AQRO60306 1485 aaKnown RBP eCLIP17.17■□□□□ 0.34
MACF1-222ENST00000494012 ABCA5Q8WWZ7 1642 aa17.16■□□□□ 0.34
MACF1-222ENST00000494012 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
MACF1-222ENST00000494012 PBRM1Q86U86 1689 aa17.15■□□□□ 0.34
MACF1-222ENST00000494012 TRIM41Q8WV44 630 aa17.13■□□□□ 0.33
MACF1-222ENST00000494012 GRIN2BQ13224 1484 aa17.11■□□□□ 0.33
MACF1-222ENST00000494012 GAPVD1Q14C86 1478 aa17.11■□□□□ 0.33
MACF1-222ENST00000494012 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
MACF1-222ENST00000494012 CHD1O14646 1710 aa17.06■□□□□ 0.32
MACF1-222ENST00000494012 SNAPC4Q5SXM2 1469 aa17.05■□□□□ 0.32
MACF1-222ENST00000494012 AEBP2Q6ZN18 517 aaPredicted RBP17.04■□□□□ 0.32
MACF1-222ENST00000494012 ERICH3Q5RHP9 1530 aa17.02■□□□□ 0.32
MACF1-222ENST00000494012 SYNJ2O15056 1496 aa16.99■□□□□ 0.31
MACF1-222ENST00000494012 KIF27Q86VH2 1401 aa16.99■□□□□ 0.31
MACF1-222ENST00000494012 ADAMTS12P58397 1594 aa16.98■□□□□ 0.31
MACF1-222ENST00000494012 OSCARQ8IYS5 282 aa16.96■□□□□ 0.31
MACF1-222ENST00000494012 FBLN2P98095 1184 aa16.94■□□□□ 0.3
MACF1-222ENST00000494012 CUL7Q14999 1698 aa16.94■□□□□ 0.3
MACF1-222ENST00000494012 CHMP7Q8WUX9 453 aaPredicted RBP16.92■□□□□ 0.3
MACF1-222ENST00000494012 FHAD1B1AJZ9 1412 aa16.92■□□□□ 0.3
MACF1-222ENST00000494012 GRIN2AQ12879 1464 aa16.89■□□□□ 0.29
MACF1-222ENST00000494012 IGF1RP08069 1367 aa16.84■□□□□ 0.29
MACF1-222ENST00000494012 CLASP1Q7Z460 1538 aa16.84■□□□□ 0.29
MACF1-222ENST00000494012 CEP170Q5SW79 1584 aa16.81■□□□□ 0.28
MACF1-222ENST00000494012 RUSC2Q8N2Y8 1516 aa16.8■□□□□ 0.28
MACF1-222ENST00000494012 CHIC1Q5VXU3 224 aa16.79■□□□□ 0.28
MACF1-222ENST00000494012 NUP160Q12769 1436 aa16.79■□□□□ 0.28
MACF1-222ENST00000494012 CARMIL1Q5VZK9 1371 aa16.77■□□□□ 0.27
MACF1-222ENST00000494012 EEA1Q15075 1411 aa16.76■□□□□ 0.27
MACF1-222ENST00000494012 RIMBP3CA6NJZ7 1639 aa16.75■□□□□ 0.27
MACF1-222ENST00000494012 RIMBP3BA6NNM3 1639 aa16.75■□□□□ 0.27
MACF1-222ENST00000494012 RIMBP3Q9UFD9 1639 aa16.75■□□□□ 0.27
MACF1-222ENST00000494012 ARHGEF11O15085 1522 aa16.75■□□□□ 0.27
MACF1-222ENST00000494012 RAPGEF2Q9Y4G8 1499 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 244.2 ms