RNA–Protein interactions for RNA: ENST00000493526.1

RHBDD1-214, Transcript of rhomboid domain containing 1, humanhuman

TSL 3

Gene RHBDD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-214ENST00000493526 NISCHQ9Y2I1 1504 aa20.83■□□□□ 0.92
RHBDD1-214ENST00000493526 CCDC180Q9P1Z9 1646 aa18.57■□□□□ 0.56
RHBDD1-214ENST00000493526 ABCC9O60706 1549 aa18.13■□□□□ 0.49
RHBDD1-214ENST00000493526 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
RHBDD1-214ENST00000493526 NACADO15069 1562 aa17.45■□□□□ 0.38
RHBDD1-214ENST00000493526 DCAF8L2P0C7V8 631 aa17.38■□□□□ 0.37
RHBDD1-214ENST00000493526 MYO15BQ96JP2 1530 aa17.36■□□□□ 0.37
RHBDD1-214ENST00000493526 ZCCHC6Q5VYS8 1495 aaKnown RBP17.34■□□□□ 0.37
RHBDD1-214ENST00000493526 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
RHBDD1-214ENST00000493526 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
RHBDD1-214ENST00000493526 PABPN1Q86U42 306 aaKnown RBP eCLIP16.93■□□□□ 0.3
RHBDD1-214ENST00000493526 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
RHBDD1-214ENST00000493526 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
RHBDD1-214ENST00000493526 SHROOM4Q9ULL8 1493 aa16.79■□□□□ 0.28
RHBDD1-214ENST00000493526 DNAJC5BQ9UF47 199 aa16.66■□□□□ 0.26
RHBDD1-214ENST00000493526 EIF4G1Q04637 1599 aaKnown RBP16.48■□□□□ 0.23
RHBDD1-214ENST00000493526 CC2D2AQ9P2K1 1620 aa16.43■□□□□ 0.22
RHBDD1-214ENST00000493526 CECR2Q9BXF3 1484 aa16.31■□□□□ 0.2
RHBDD1-214ENST00000493526 SMARCA4P51532 1647 aa16.17■□□□□ 0.18
RHBDD1-214ENST00000493526 BAZ1AQ9NRL2 1556 aaPredicted RBP16.16■□□□□ 0.18
RHBDD1-214ENST00000493526 NCAPD3P42695 1498 aa16.1■□□□□ 0.17
RHBDD1-214ENST00000493526 ATAD2BQ9ULI0 1458 aa16.09■□□□□ 0.17
RHBDD1-214ENST00000493526 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
RHBDD1-214ENST00000493526 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
RHBDD1-214ENST00000493526 PEG3Q9GZU2 1588 aa16.03■□□□□ 0.16
RHBDD1-214ENST00000493526 HMGXB3Q12766 1538 aa16.02■□□□□ 0.15
RHBDD1-214ENST00000493526 BAZ1BQ9UIG0 1483 aaKnown RBP15.95■□□□□ 0.14
RHBDD1-214ENST00000493526 WIZO95785 1651 aa15.87■□□□□ 0.13
RHBDD1-214ENST00000493526 RSF1Q96T23 1441 aaPredicted RBP15.86■□□□□ 0.13
RHBDD1-214ENST00000493526 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
RHBDD1-214ENST00000493526 LAMC3Q9Y6N6 1575 aa15.68■□□□□ 0.1
RHBDD1-214ENST00000493526 NESP48681 1621 aa15.68■□□□□ 0.1
RHBDD1-214ENST00000493526 SUPT5HO00267 1087 aaKnown RBP15.66■□□□□ 0.1
RHBDD1-214ENST00000493526 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
RHBDD1-214ENST00000493526 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
RHBDD1-214ENST00000493526 PDS5BQ9NTI5 1447 aa15.57■□□□□ 0.08
RHBDD1-214ENST00000493526 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
RHBDD1-214ENST00000493526 CCDC88BA6NC98 1476 aa15.52■□□□□ 0.07
RHBDD1-214ENST00000493526 CUX2O14529 1486 aa15.52■□□□□ 0.07
RHBDD1-214ENST00000493526 CFTRP13569 1480 aa15.52■□□□□ 0.07
RHBDD1-214ENST00000493526 THOC2Q8NI27 1593 aaKnown RBP15.47■□□□□ 0.07
RHBDD1-214ENST00000493526 PRDM2Q13029 1718 aa15.45■□□□□ 0.06
RHBDD1-214ENST00000493526 FANCD2Q9BXW9 1451 aa15.43■□□□□ 0.06
RHBDD1-214ENST00000493526 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
RHBDD1-214ENST00000493526 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
RHBDD1-214ENST00000493526 WDR62O43379 1518 aa15.36■□□□□ 0.05
RHBDD1-214ENST00000493526 URB2Q14146 1524 aaKnown RBP15.27■□□□□ 0.03
RHBDD1-214ENST00000493526 ABCC8Q09428 1581 aa15.22■□□□□ 0.03
RHBDD1-214ENST00000493526 TOPBP1Q92547 1522 aa15.18■□□□□ 0.02
RHBDD1-214ENST00000493526 DNMBPQ6XZF7 1577 aa15.17■□□□□ 0.02
RHBDD1-214ENST00000493526 IFT140Q96RY7 1462 aa15.11■□□□□ 0.01
RHBDD1-214ENST00000493526 DNAJC5Q9H3Z4 198 aa15.07■□□□□ 0
RHBDD1-214ENST00000493526 CUX1P39880 1505 aa15.04■□□□□ -0
RHBDD1-214ENST00000493526 POLA1P09884 1462 aaPredicted RBP15.04■□□□□ -0
RHBDD1-214ENST00000493526 TARBP1Q13395 1621 aaKnown RBP15.02□□□□□ -0.01
RHBDD1-214ENST00000493526 ZNF608Q9ULD9 1512 aaPredicted RBP15.01□□□□□ -0.01
RHBDD1-214ENST00000493526 FGD5Q6ZNL6 1462 aa15.01□□□□□ -0.01
RHBDD1-214ENST00000493526 SOGA1O94964 1423 aa15□□□□□ -0.01
RHBDD1-214ENST00000493526 RAD54L2Q9Y4B4 1467 aa14.97□□□□□ -0.01
RHBDD1-214ENST00000493526 EIF4G3O43432 1585 aaKnown RBP14.96□□□□□ -0.01
RHBDD1-214ENST00000493526 WRNQ14191 1432 aaPredicted RBP eCLIP14.95□□□□□ -0.02
RHBDD1-214ENST00000493526 WDR97A6NE52 1622 aa14.94□□□□□ -0.02
RHBDD1-214ENST00000493526 TOP2BQ02880 1626 aa14.93□□□□□ -0.02
RHBDD1-214ENST00000493526 BIVM-ERCC5R4GMW8 1640 aa14.93□□□□□ -0.02
RHBDD1-214ENST00000493526 AQRO60306 1485 aaKnown RBP eCLIP14.93□□□□□ -0.02
RHBDD1-214ENST00000493526 SYNJ1O43426 1573 aa14.9□□□□□ -0.02
RHBDD1-214ENST00000493526 TDRD9Q8NDG6 1382 aaKnown RBP14.89□□□□□ -0.03
RHBDD1-214ENST00000493526 ABCA10Q8WWZ4 1543 aa14.87□□□□□ -0.03
RHBDD1-214ENST00000493526 OSCARQ8IYS5 282 aa14.87□□□□□ -0.03
RHBDD1-214ENST00000493526 CHIC1Q5VXU3 224 aa14.84□□□□□ -0.03
RHBDD1-214ENST00000493526 GRIN2BQ13224 1484 aa14.82□□□□□ -0.04
RHBDD1-214ENST00000493526 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
RHBDD1-214ENST00000493526 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
RHBDD1-214ENST00000493526 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
RHBDD1-214ENST00000493526 CHD1O14646 1710 aa14.8□□□□□ -0.04
RHBDD1-214ENST00000493526 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
RHBDD1-214ENST00000493526 MAGI1Q96QZ7 1491 aaPredicted RBP14.8□□□□□ -0.04
RHBDD1-214ENST00000493526 SNAPC4Q5SXM2 1469 aa14.79□□□□□ -0.04
RHBDD1-214ENST00000493526 FBLN2P98095 1184 aa14.75□□□□□ -0.05
RHBDD1-214ENST00000493526 CHMP7Q8WUX9 453 aaPredicted RBP14.73□□□□□ -0.05
RHBDD1-214ENST00000493526 SYNJ2O15056 1496 aa14.73□□□□□ -0.05
RHBDD1-214ENST00000493526 ERICH3Q5RHP9 1530 aa14.71□□□□□ -0.06
RHBDD1-214ENST00000493526 ADAMTS12P58397 1594 aa14.67□□□□□ -0.06
RHBDD1-214ENST00000493526 FHAD1B1AJZ9 1412 aa14.66□□□□□ -0.06
RHBDD1-214ENST00000493526 KIF27Q86VH2 1401 aa14.65□□□□□ -0.06
RHBDD1-214ENST00000493526 CLASP1Q7Z460 1538 aa14.63□□□□□ -0.07
RHBDD1-214ENST00000493526 GRIN2AQ12879 1464 aa14.63□□□□□ -0.07
RHBDD1-214ENST00000493526 RIMBP3CA6NJZ7 1639 aa14.62□□□□□ -0.07
RHBDD1-214ENST00000493526 RIMBP3BA6NNM3 1639 aa14.62□□□□□ -0.07
RHBDD1-214ENST00000493526 RIMBP3Q9UFD9 1639 aa14.62□□□□□ -0.07
RHBDD1-214ENST00000493526 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
RHBDD1-214ENST00000493526 RUSC2Q8N2Y8 1516 aa14.58□□□□□ -0.08
RHBDD1-214ENST00000493526 CUL7Q14999 1698 aa14.58□□□□□ -0.08
RHBDD1-214ENST00000493526 IGF1RP08069 1367 aa14.58□□□□□ -0.08
RHBDD1-214ENST00000493526 AEBP2Q6ZN18 517 aaPredicted RBP14.57□□□□□ -0.08
RHBDD1-214ENST00000493526 NUP160Q12769 1436 aa14.57□□□□□ -0.08
RHBDD1-214ENST00000493526 CEP170Q5SW79 1584 aa14.55□□□□□ -0.08
RHBDD1-214ENST00000493526 EEA1Q15075 1411 aa14.54□□□□□ -0.08
RHBDD1-214ENST00000493526 CARMIL1Q5VZK9 1371 aa14.5□□□□□ -0.09
RHBDD1-214ENST00000493526 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms