RNA–Protein interactions for RNA: ENST00000493490.1

RASSF4-212, Transcript of Ras association domain family member 4, humanhuman

TSL 2

Gene RASSF4, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RASSF4-212ENST00000493490 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
RASSF4-212ENST00000493490 CCDC180Q9P1Z9 1646 aa25.24■■□□□ 1.63
RASSF4-212ENST00000493490 ABCC9O60706 1549 aa24.81■■□□□ 1.56
RASSF4-212ENST00000493490 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
RASSF4-212ENST00000493490 ZCCHC6Q5VYS8 1495 aaKnown RBP23.86■■□□□ 1.41
RASSF4-212ENST00000493490 NACADO15069 1562 aa23.74■■□□□ 1.39
RASSF4-212ENST00000493490 RB1CC1Q8TDY2 1594 aa23.74■■□□□ 1.39
RASSF4-212ENST00000493490 MYO15BQ96JP2 1530 aa23.56■■□□□ 1.36
RASSF4-212ENST00000493490 DCAF1Q9Y4B6 1507 aa23.56■■□□□ 1.36
RASSF4-212ENST00000493490 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
RASSF4-212ENST00000493490 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
RASSF4-212ENST00000493490 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
RASSF4-212ENST00000493490 BICRAQ9NZM4 1560 aa23.13■■□□□ 1.29
RASSF4-212ENST00000493490 DNAJC5BQ9UF47 199 aa23.06■■□□□ 1.28
RASSF4-212ENST00000493490 SHROOM4Q9ULL8 1493 aa22.97■■□□□ 1.27
RASSF4-212ENST00000493490 EIF4G1Q04637 1599 aaKnown RBP22.46■■□□□ 1.19
RASSF4-212ENST00000493490 CECR2Q9BXF3 1484 aa22.41■■□□□ 1.18
RASSF4-212ENST00000493490 CC2D2AQ9P2K1 1620 aa22.36■■□□□ 1.17
RASSF4-212ENST00000493490 SMARCA4P51532 1647 aa22.17■■□□□ 1.14
RASSF4-212ENST00000493490 MROH2BQ7Z745 1585 aa22.15■■□□□ 1.14
RASSF4-212ENST00000493490 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
RASSF4-212ENST00000493490 ATAD2BQ9ULI0 1458 aa22.04■■□□□ 1.12
RASSF4-212ENST00000493490 NCAPD3P42695 1498 aa21.95■■□□□ 1.1
RASSF4-212ENST00000493490 RSF1Q96T23 1441 aaPredicted RBP21.94■■□□□ 1.1
RASSF4-212ENST00000493490 WIZO95785 1651 aa21.92■■□□□ 1.1
RASSF4-212ENST00000493490 SMARCA2P51531 1590 aa21.92■■□□□ 1.1
RASSF4-212ENST00000493490 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
RASSF4-212ENST00000493490 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
RASSF4-212ENST00000493490 DNAJC5Q9H3Z4 198 aa21.83■■□□□ 1.09
RASSF4-212ENST00000493490 HMGXB3Q12766 1538 aa21.8■■□□□ 1.08
RASSF4-212ENST00000493490 SUPT5HO00267 1087 aaKnown RBP21.66■■□□□ 1.06
RASSF4-212ENST00000493490 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
RASSF4-212ENST00000493490 NESP48681 1621 aa21.54■■□□□ 1.04
RASSF4-212ENST00000493490 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
RASSF4-212ENST00000493490 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
RASSF4-212ENST00000493490 LAMC3Q9Y6N6 1575 aa21.3■■□□□ 1
RASSF4-212ENST00000493490 ERCC6Q03468 1493 aa21.28■■□□□ 1
RASSF4-212ENST00000493490 CFTRP13569 1480 aa21.24■□□□□ 0.99
RASSF4-212ENST00000493490 PDS5BQ9NTI5 1447 aa21.19■□□□□ 0.98
RASSF4-212ENST00000493490 KIF21AQ7Z4S6 1674 aa21.18■□□□□ 0.98
RASSF4-212ENST00000493490 CUX2O14529 1486 aa21.14■□□□□ 0.98
RASSF4-212ENST00000493490 FANCD2Q9BXW9 1451 aa21.13■□□□□ 0.97
RASSF4-212ENST00000493490 CEP164Q9UPV0 1460 aa21.05■□□□□ 0.96
RASSF4-212ENST00000493490 THOC2Q8NI27 1593 aaKnown RBP21.04■□□□□ 0.96
RASSF4-212ENST00000493490 PRDM2Q13029 1718 aa21■□□□□ 0.95
RASSF4-212ENST00000493490 MRC2Q9UBG0 1479 aa20.99■□□□□ 0.95
RASSF4-212ENST00000493490 URB2Q14146 1524 aaKnown RBP20.94■□□□□ 0.94
RASSF4-212ENST00000493490 WDR62O43379 1518 aa20.88■□□□□ 0.93
RASSF4-212ENST00000493490 TOPBP1Q92547 1522 aa20.81■□□□□ 0.92
RASSF4-212ENST00000493490 CUX1P39880 1505 aa20.76■□□□□ 0.91
RASSF4-212ENST00000493490 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
RASSF4-212ENST00000493490 DNMBPQ6XZF7 1577 aa20.75■□□□□ 0.91
RASSF4-212ENST00000493490 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
RASSF4-212ENST00000493490 RAD54L2Q9Y4B4 1467 aa20.65■□□□□ 0.9
RASSF4-212ENST00000493490 FGD5Q6ZNL6 1462 aa20.63■□□□□ 0.89
RASSF4-212ENST00000493490 WRNQ14191 1432 aaPredicted RBP eCLIP20.63■□□□□ 0.89
RASSF4-212ENST00000493490 SYNJ1O43426 1573 aa20.63■□□□□ 0.89
RASSF4-212ENST00000493490 ZNF608Q9ULD9 1512 aaPredicted RBP20.62■□□□□ 0.89
RASSF4-212ENST00000493490 SOGA1O94964 1423 aa20.59■□□□□ 0.89
RASSF4-212ENST00000493490 IFT140Q96RY7 1462 aa20.58■□□□□ 0.89
RASSF4-212ENST00000493490 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
RASSF4-212ENST00000493490 TOP2BQ02880 1626 aa20.53■□□□□ 0.88
RASSF4-212ENST00000493490 AQRO60306 1485 aaKnown RBP eCLIP20.53■□□□□ 0.882e-7■■■■■ 29
RASSF4-212ENST00000493490 TDRD9Q8NDG6 1382 aaKnown RBP20.52■□□□□ 0.88
RASSF4-212ENST00000493490 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
RASSF4-212ENST00000493490 TRIM41Q8WV44 630 aa20.44■□□□□ 0.86
RASSF4-212ENST00000493490 EIF4G3O43432 1585 aaKnown RBP20.43■□□□□ 0.86
RASSF4-212ENST00000493490 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
RASSF4-212ENST00000493490 ABCA10Q8WWZ4 1543 aa20.38■□□□□ 0.85
RASSF4-212ENST00000493490 GAPVD1Q14C86 1478 aa20.32■□□□□ 0.84
RASSF4-212ENST00000493490 ABCA5Q8WWZ7 1642 aa20.29■□□□□ 0.84
RASSF4-212ENST00000493490 SNAPC4Q5SXM2 1469 aa20.29■□□□□ 0.84
RASSF4-212ENST00000493490 FBLN2P98095 1184 aa20.28■□□□□ 0.84
RASSF4-212ENST00000493490 GRIN2BQ13224 1484 aa20.26■□□□□ 0.83
RASSF4-212ENST00000493490 CHIC1Q5VXU3 224 aa20.26■□□□□ 0.83
RASSF4-212ENST00000493490 PBRM1Q86U86 1689 aa20.23■□□□□ 0.83
RASSF4-212ENST00000493490 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
RASSF4-212ENST00000493490 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
RASSF4-212ENST00000493490 CHMP7Q8WUX9 453 aaPredicted RBP20.17■□□□□ 0.82
RASSF4-212ENST00000493490 CHD1O14646 1710 aa20.16■□□□□ 0.82
RASSF4-212ENST00000493490 KIF27Q86VH2 1401 aa20.16■□□□□ 0.82
RASSF4-212ENST00000493490 IGF1RP08069 1367 aa20.15■□□□□ 0.82
RASSF4-212ENST00000493490 MAGI1Q96QZ7 1491 aaPredicted RBP20.15■□□□□ 0.82
RASSF4-212ENST00000493490 SYNJ2O15056 1496 aa20.11■□□□□ 0.81
RASSF4-212ENST00000493490 ERICH3Q5RHP9 1530 aa20.1■□□□□ 0.81
RASSF4-212ENST00000493490 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
RASSF4-212ENST00000493490 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
RASSF4-212ENST00000493490 FHAD1B1AJZ9 1412 aa20.06■□□□□ 0.8
RASSF4-212ENST00000493490 GRIN2AQ12879 1464 aa20.02■□□□□ 0.8
RASSF4-212ENST00000493490 CARMIL1Q5VZK9 1371 aa20.01■□□□□ 0.79
RASSF4-212ENST00000493490 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
RASSF4-212ENST00000493490 CUL7Q14999 1698 aa19.93■□□□□ 0.78
RASSF4-212ENST00000493490 CLASP1Q7Z460 1538 aa19.92■□□□□ 0.78
RASSF4-212ENST00000493490 CSRNP3Q8WYN3 585 aa19.92■□□□□ 0.78
RASSF4-212ENST00000493490 NUP160Q12769 1436 aa19.92■□□□□ 0.78
RASSF4-212ENST00000493490 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
RASSF4-212ENST00000493490 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
RASSF4-212ENST00000493490 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
RASSF4-212ENST00000493490 RIMBP3CA6NJZ7 1639 aa19.83■□□□□ 0.76
RASSF4-212ENST00000493490 RIMBP3BA6NNM3 1639 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms