RNA–Protein interactions for RNA: ENST00000493389.1

PMM1-209, Transcript of phosphomannomutase 1, humanhuman

TSL 3

Gene PMM1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMM1-209ENST00000493389 NISCHQ9Y2I1 1504 aa43.54■■■■■ 4.56
PMM1-209ENST00000493389 CCDC180Q9P1Z9 1646 aa38.63■■■■□ 3.77
PMM1-209ENST00000493389 ABCC9O60706 1549 aa38.08■■■■□ 3.69
PMM1-209ENST00000493389 DCAF8L2P0C7V8 631 aa36.51■■■■□ 3.44
PMM1-209ENST00000493389 RB1CC1Q8TDY2 1594 aa36.46■■■■□ 3.43
PMM1-209ENST00000493389 NACADO15069 1562 aa36.4■■■■□ 3.42
PMM1-209ENST00000493389 ZCCHC6Q5VYS8 1495 aaKnown RBP36.25■■■■□ 3.39
PMM1-209ENST00000493389 MYO15BQ96JP2 1530 aa36.13■■■■□ 3.38
PMM1-209ENST00000493389 DCAF1Q9Y4B6 1507 aa35.96■■■■□ 3.35
PMM1-209ENST00000493389 PABPN1Q86U42 306 aaKnown RBP eCLIP35.63■■■■□ 3.29
PMM1-209ENST00000493389 UNC13AQ9UPW8 1703 aa35.56■■■■□ 3.28
PMM1-209ENST00000493389 BICRAQ9NZM4 1560 aa35.43■■■■□ 3.26
PMM1-209ENST00000493389 SCRIBQ14160 1630 aa35.37■■■■□ 3.25
PMM1-209ENST00000493389 DNAJC5BQ9UF47 199 aa35.13■■■■□ 3.21
PMM1-209ENST00000493389 SHROOM4Q9ULL8 1493 aa34.96■■■■□ 3.19
PMM1-209ENST00000493389 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
PMM1-209ENST00000493389 CC2D2AQ9P2K1 1620 aa34.37■■■■□ 3.09
PMM1-209ENST00000493389 CECR2Q9BXF3 1484 aa34.2■■■■□ 3.07
PMM1-209ENST00000493389 SMARCA4P51532 1647 aa33.78■■■■□ 3
PMM1-209ENST00000493389 BAZ1AQ9NRL2 1556 aaPredicted RBP33.72■■■□□ 2.99
PMM1-209ENST00000493389 ATAD2BQ9ULI0 1458 aa33.68■■■□□ 2.98
PMM1-209ENST00000493389 NCAPD3P42695 1498 aa33.65■■■□□ 2.98
PMM1-209ENST00000493389 MROH2BQ7Z745 1585 aa33.6■■■□□ 2.97
PMM1-209ENST00000493389 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
PMM1-209ENST00000493389 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
PMM1-209ENST00000493389 PEG3Q9GZU2 1588 aa33.43■■■□□ 2.94
PMM1-209ENST00000493389 BAZ1BQ9UIG0 1483 aaKnown RBP33.37■■■□□ 2.93
PMM1-209ENST00000493389 RSF1Q96T23 1441 aaPredicted RBP33.19■■■□□ 2.9
PMM1-209ENST00000493389 WIZO95785 1651 aa33.17■■■□□ 2.9
PMM1-209ENST00000493389 NESP48681 1621 aa32.93■■■□□ 2.86
PMM1-209ENST00000493389 TOP2AP11388 1531 aaKnown RBP32.82■■■□□ 2.84
PMM1-209ENST00000493389 ERCC6Q03468 1493 aa32.79■■■□□ 2.84
PMM1-209ENST00000493389 LAMC3Q9Y6N6 1575 aa32.7■■■□□ 2.83
PMM1-209ENST00000493389 CADPSQ9ULU8 1353 aa32.69■■■□□ 2.82
PMM1-209ENST00000493389 PDS5BQ9NTI5 1447 aa32.55■■■□□ 2.8
PMM1-209ENST00000493389 CCDC88BA6NC98 1476 aa32.48■■■□□ 2.79
PMM1-209ENST00000493389 CFTRP13569 1480 aa32.46■■■□□ 2.79
PMM1-209ENST00000493389 CUX2O14529 1486 aa32.43■■■□□ 2.78
PMM1-209ENST00000493389 KIF21AQ7Z4S6 1674 aa32.4■■■□□ 2.78
PMM1-209ENST00000493389 THOC2Q8NI27 1593 aaKnown RBP32.36■■■□□ 2.77
PMM1-209ENST00000493389 SUPT5HO00267 1087 aaKnown RBP32.32■■■□□ 2.76
PMM1-209ENST00000493389 FANCD2Q9BXW9 1451 aa32.3■■■□□ 2.76
PMM1-209ENST00000493389 CEP164Q9UPV0 1460 aa32.25■■■□□ 2.75
PMM1-209ENST00000493389 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
PMM1-209ENST00000493389 WDR62O43379 1518 aa32.11■■■□□ 2.73
PMM1-209ENST00000493389 URB2Q14146 1524 aaKnown RBP32■■■□□ 2.71
PMM1-209ENST00000493389 PRDM2Q13029 1718 aa31.99■■■□□ 2.71
PMM1-209ENST00000493389 TOPBP1Q92547 1522 aa31.77■■■□□ 2.68
PMM1-209ENST00000493389 DNMBPQ6XZF7 1577 aa31.68■■■□□ 2.66
PMM1-209ENST00000493389 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
PMM1-209ENST00000493389 DNAJC5Q9H3Z4 198 aa31.63■■■□□ 2.65
PMM1-209ENST00000493389 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
PMM1-209ENST00000493389 CUX1P39880 1505 aa31.52■■■□□ 2.64
PMM1-209ENST00000493389 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.63
PMM1-209ENST00000493389 POLA1P09884 1462 aaPredicted RBP31.51■■■□□ 2.63
PMM1-209ENST00000493389 RAD54L2Q9Y4B4 1467 aa31.42■■■□□ 2.62
PMM1-209ENST00000493389 FGD5Q6ZNL6 1462 aa31.41■■■□□ 2.62
PMM1-209ENST00000493389 TARBP1Q13395 1621 aaKnown RBP31.39■■■□□ 2.62
PMM1-209ENST00000493389 SOGA1O94964 1423 aa31.38■■■□□ 2.61
PMM1-209ENST00000493389 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.61
PMM1-209ENST00000493389 EIF4G3O43432 1585 aaKnown RBP31.3■■■□□ 2.6
PMM1-209ENST00000493389 WRNQ14191 1432 aaPredicted RBP eCLIP31.27■■■□□ 2.69e-6■■■■■ 50.1
PMM1-209ENST00000493389 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
PMM1-209ENST00000493389 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
PMM1-209ENST00000493389 TOP2BQ02880 1626 aa31.15■■■□□ 2.58
PMM1-209ENST00000493389 OSCARQ8IYS5 282 aa31.12■■■□□ 2.57
PMM1-209ENST00000493389 BIVM-ERCC5R4GMW8 1640 aa31.11■■■□□ 2.57
PMM1-209ENST00000493389 ABCA10Q8WWZ4 1543 aa31.08■■■□□ 2.57
PMM1-209ENST00000493389 WDR97A6NE52 1622 aa31.06■■■□□ 2.56
PMM1-209ENST00000493389 GRIN2BQ13224 1484 aa31.01■■■□□ 2.55
PMM1-209ENST00000493389 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.55
PMM1-209ENST00000493389 GAPVD1Q14C86 1478 aa31■■■□□ 2.55
PMM1-209ENST00000493389 FBLN2P98095 1184 aa30.98■■■□□ 2.55
PMM1-209ENST00000493389 ABCA5Q8WWZ7 1642 aa30.94■■■□□ 2.54
PMM1-209ENST00000493389 MAGI1Q96QZ7 1491 aaPredicted RBP30.9■■■□□ 2.54
PMM1-209ENST00000493389 CHD1O14646 1710 aa30.87■■■□□ 2.53
PMM1-209ENST00000493389 CHMP7Q8WUX9 453 aaPredicted RBP30.84■■■□□ 2.53
PMM1-209ENST00000493389 PBRM1Q86U86 1689 aa30.83■■■□□ 2.53
PMM1-209ENST00000493389 SYNJ2O15056 1496 aa30.81■■■□□ 2.52
PMM1-209ENST00000493389 ERICH3Q5RHP9 1530 aa30.68■■■□□ 2.5
PMM1-209ENST00000493389 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
PMM1-209ENST00000493389 FHAD1B1AJZ9 1412 aa30.64■■■□□ 2.49
PMM1-209ENST00000493389 KIF27Q86VH2 1401 aa30.61■■■□□ 2.49
PMM1-209ENST00000493389 GRIN2AQ12879 1464 aa30.61■■■□□ 2.49
PMM1-209ENST00000493389 ARHGEF11O15085 1522 aa30.61■■■□□ 2.49
PMM1-209ENST00000493389 CLASP1Q7Z460 1538 aa30.61■■■□□ 2.49
PMM1-209ENST00000493389 TRIM41Q8WV44 630 aa30.6■■■□□ 2.49
PMM1-209ENST00000493389 RIMBP3CA6NJZ7 1639 aa30.59■■■□□ 2.49
PMM1-209ENST00000493389 RIMBP3BA6NNM3 1639 aa30.59■■■□□ 2.49
PMM1-209ENST00000493389 RIMBP3Q9UFD9 1639 aa30.59■■■□□ 2.49
PMM1-209ENST00000493389 IGF1RP08069 1367 aa30.54■■■□□ 2.48
PMM1-209ENST00000493389 NUP160Q12769 1436 aa30.48■■■□□ 2.47
PMM1-209ENST00000493389 CEP170Q5SW79 1584 aa30.46■■■□□ 2.47
PMM1-209ENST00000493389 ARAP1Q96P48 1450 aa30.39■■■□□ 2.46
PMM1-209ENST00000493389 CYB5RLQ6IPT4 315 aa30.39■■■□□ 2.46
PMM1-209ENST00000493389 RUSC2Q8N2Y8 1516 aa30.38■■■□□ 2.45
PMM1-209ENST00000493389 CARMIL1Q5VZK9 1371 aa30.34■■■□□ 2.45
PMM1-209ENST00000493389 CUL7Q14999 1698 aa30.33■■■□□ 2.45
PMM1-209ENST00000493389 ERCC6L2Q5T890 1561 aa30.24■■■□□ 2.43
PMM1-209ENST00000493389 JPH4Q96JJ6 628 aa30.2■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms