RNA–Protein interactions for RNA: ENST00000493347.5

PPP5C-210, Transcript of protein phosphatase 5 catalytic subunit, humanhuman

TSL 3

Gene PPP5C, Length 431 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP5C-210ENST00000493347 NISCHQ9Y2I1 1504 aa36■■■■□ 3.35
PPP5C-210ENST00000493347 CCDC180Q9P1Z9 1646 aa31.89■■■□□ 2.7
PPP5C-210ENST00000493347 ABCC9O60706 1549 aa30.91■■■□□ 2.54
PPP5C-210ENST00000493347 ZCCHC6Q5VYS8 1495 aaKnown RBP30.09■■■□□ 2.41
PPP5C-210ENST00000493347 NACADO15069 1562 aa29.89■■■□□ 2.38
PPP5C-210ENST00000493347 MYO15BQ96JP2 1530 aa29.84■■■□□ 2.37
PPP5C-210ENST00000493347 RB1CC1Q8TDY2 1594 aa29.84■■■□□ 2.37
PPP5C-210ENST00000493347 DCAF1Q9Y4B6 1507 aa29.82■■■□□ 2.36
PPP5C-210ENST00000493347 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
PPP5C-210ENST00000493347 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
PPP5C-210ENST00000493347 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
PPP5C-210ENST00000493347 BICRAQ9NZM4 1560 aa29.02■■■□□ 2.24
PPP5C-210ENST00000493347 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
PPP5C-210ENST00000493347 SHROOM4Q9ULL8 1493 aa28.7■■■□□ 2.18
PPP5C-210ENST00000493347 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
PPP5C-210ENST00000493347 DNAJC5BQ9UF47 199 aa28.14■■■□□ 2.1
PPP5C-210ENST00000493347 CECR2Q9BXF3 1484 aa28.03■■■□□ 2.08
PPP5C-210ENST00000493347 CC2D2AQ9P2K1 1620 aa28■■■□□ 2.07
PPP5C-210ENST00000493347 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
PPP5C-210ENST00000493347 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PPP5C-210ENST00000493347 MROH2BQ7Z745 1585 aa27.76■■■□□ 2.03
PPP5C-210ENST00000493347 ATAD2BQ9ULI0 1458 aa27.65■■■□□ 2.02
PPP5C-210ENST00000493347 PEG3Q9GZU2 1588 aa27.65■■■□□ 2.02
PPP5C-210ENST00000493347 SMARCA2P51531 1590 aa27.6■■■□□ 2.01
PPP5C-210ENST00000493347 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
PPP5C-210ENST00000493347 RSF1Q96T23 1441 aaPredicted RBP27.52■■■□□ 2
PPP5C-210ENST00000493347 HMGXB3Q12766 1538 aa27.51■■□□□ 1.99
PPP5C-210ENST00000493347 WIZO95785 1651 aa27.46■■□□□ 1.99
PPP5C-210ENST00000493347 BAZ1BQ9UIG0 1483 aaKnown RBP27.4■■□□□ 1.98
PPP5C-210ENST00000493347 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
PPP5C-210ENST00000493347 SUPT5HO00267 1087 aaKnown RBP26.89■■□□□ 1.9
PPP5C-210ENST00000493347 NESP48681 1621 aa26.86■■□□□ 1.89
PPP5C-210ENST00000493347 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
PPP5C-210ENST00000493347 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
PPP5C-210ENST00000493347 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
PPP5C-210ENST00000493347 CFTRP13569 1480 aa26.71■■□□□ 1.87
PPP5C-210ENST00000493347 PDS5BQ9NTI5 1447 aa26.56■■□□□ 1.84
PPP5C-210ENST00000493347 ERCC6Q03468 1493 aa26.55■■□□□ 1.84
PPP5C-210ENST00000493347 KIF21AQ7Z4S6 1674 aa26.55■■□□□ 1.84
PPP5C-210ENST00000493347 PRDM2Q13029 1718 aa26.53■■□□□ 1.84
PPP5C-210ENST00000493347 FANCD2Q9BXW9 1451 aa26.48■■□□□ 1.83
PPP5C-210ENST00000493347 THOC2Q8NI27 1593 aaKnown RBP26.44■■□□□ 1.82
PPP5C-210ENST00000493347 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
PPP5C-210ENST00000493347 MRC2Q9UBG0 1479 aa26.34■■□□□ 1.81
PPP5C-210ENST00000493347 WDR62O43379 1518 aa26.28■■□□□ 1.8
PPP5C-210ENST00000493347 URB2Q14146 1524 aaKnown RBP26.24■■□□□ 1.79
PPP5C-210ENST00000493347 CUX2O14529 1486 aa26.24■■□□□ 1.79
PPP5C-210ENST00000493347 TOPBP1Q92547 1522 aa26.11■■□□□ 1.77
PPP5C-210ENST00000493347 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
PPP5C-210ENST00000493347 ABCC8Q09428 1581 aa26.04■■□□□ 1.76
PPP5C-210ENST00000493347 CUX1P39880 1505 aa26.04■■□□□ 1.76
PPP5C-210ENST00000493347 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
PPP5C-210ENST00000493347 WRNQ14191 1432 aaPredicted RBP eCLIP25.91■■□□□ 1.74
PPP5C-210ENST00000493347 SYNJ1O43426 1573 aa25.9■■□□□ 1.74
PPP5C-210ENST00000493347 FGD5Q6ZNL6 1462 aa25.87■■□□□ 1.73
PPP5C-210ENST00000493347 BIVM-ERCC5R4GMW8 1640 aa25.87■■□□□ 1.73
PPP5C-210ENST00000493347 TOP2BQ02880 1626 aa25.86■■□□□ 1.73
PPP5C-210ENST00000493347 IFT140Q96RY7 1462 aa25.85■■□□□ 1.73
PPP5C-210ENST00000493347 TARBP1Q13395 1621 aaKnown RBP25.83■■□□□ 1.73
PPP5C-210ENST00000493347 RAD54L2Q9Y4B4 1467 aa25.78■■□□□ 1.72
PPP5C-210ENST00000493347 ZNF608Q9ULD9 1512 aaPredicted RBP25.74■■□□□ 1.71
PPP5C-210ENST00000493347 SOGA1O94964 1423 aa25.73■■□□□ 1.71
PPP5C-210ENST00000493347 WDR97A6NE52 1622 aa25.71■■□□□ 1.71
PPP5C-210ENST00000493347 EIF4G3O43432 1585 aaKnown RBP25.66■■□□□ 1.7
PPP5C-210ENST00000493347 ABCA10Q8WWZ4 1543 aa25.65■■□□□ 1.7
PPP5C-210ENST00000493347 AQRO60306 1485 aaKnown RBP eCLIP25.6■■□□□ 1.696e-7■■■■■ 27.8
PPP5C-210ENST00000493347 TDRD9Q8NDG6 1382 aaKnown RBP25.57■■□□□ 1.68
PPP5C-210ENST00000493347 ABCA5Q8WWZ7 1642 aa25.55■■□□□ 1.68
PPP5C-210ENST00000493347 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
PPP5C-210ENST00000493347 PBRM1Q86U86 1689 aa25.43■■□□□ 1.66
PPP5C-210ENST00000493347 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
PPP5C-210ENST00000493347 SNAPC4Q5SXM2 1469 aa25.39■■□□□ 1.65
PPP5C-210ENST00000493347 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
PPP5C-210ENST00000493347 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
PPP5C-210ENST00000493347 ERICH3Q5RHP9 1530 aa25.32■■□□□ 1.64
PPP5C-210ENST00000493347 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
PPP5C-210ENST00000493347 KIF27Q86VH2 1401 aa25.31■■□□□ 1.64
PPP5C-210ENST00000493347 ADAMTS12P58397 1594 aa25.29■■□□□ 1.64
PPP5C-210ENST00000493347 CHD1O14646 1710 aa25.27■■□□□ 1.64
PPP5C-210ENST00000493347 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
PPP5C-210ENST00000493347 RUSC2Q8N2Y8 1516 aa25.24■■□□□ 1.63
PPP5C-210ENST00000493347 IGF1RP08069 1367 aa25.21■■□□□ 1.63
PPP5C-210ENST00000493347 FHAD1B1AJZ9 1412 aa25.19■■□□□ 1.62
PPP5C-210ENST00000493347 CUL7Q14999 1698 aa25.14■■□□□ 1.62
PPP5C-210ENST00000493347 GRIN2AQ12879 1464 aa25.13■■□□□ 1.61
PPP5C-210ENST00000493347 FBLN2P98095 1184 aa25.1■■□□□ 1.61
PPP5C-210ENST00000493347 CHMP7Q8WUX9 453 aaPredicted RBP25.1■■□□□ 1.61
PPP5C-210ENST00000493347 OSCARQ8IYS5 282 aa25.09■■□□□ 1.61
PPP5C-210ENST00000493347 DNAJC5Q9H3Z4 198 aa25.07■■□□□ 1.6
PPP5C-210ENST00000493347 CLASP1Q7Z460 1538 aa25.05■■□□□ 1.6
PPP5C-210ENST00000493347 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
PPP5C-210ENST00000493347 CARMIL1Q5VZK9 1371 aa25.04■■□□□ 1.6
PPP5C-210ENST00000493347 NUP160Q12769 1436 aa25.03■■□□□ 1.6
PPP5C-210ENST00000493347 EEA1Q15075 1411 aa25.02■■□□□ 1.6
PPP5C-210ENST00000493347 PRXQ9BXM0 1461 aa24.97■■□□□ 1.59
PPP5C-210ENST00000493347 RAPGEF2Q9Y4G8 1499 aa24.94■■□□□ 1.58
PPP5C-210ENST00000493347 CSRNP3Q8WYN3 585 aa24.9■■□□□ 1.58
PPP5C-210ENST00000493347 SHROOM2Q13796 1616 aa24.84■■□□□ 1.57
PPP5C-210ENST00000493347 FAM9AQ8IZU1 332 aaPredicted RBP24.84■■□□□ 1.57
PPP5C-210ENST00000493347 ARHGEF11O15085 1522 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms