RNA–Protein interactions for RNA: ENST00000493296.1

FMOD-203, Transcript of fibromodulin, humanhuman

TSL 3

Gene FMOD, Length 717 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMOD-203ENST00000493296 NISCHQ9Y2I1 1504 aa24.39■■□□□ 1.49
FMOD-203ENST00000493296 CCDC180Q9P1Z9 1646 aa21.61■■□□□ 1.05
FMOD-203ENST00000493296 ABCC9O60706 1549 aa21.53■■□□□ 1.04
FMOD-203ENST00000493296 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
FMOD-203ENST00000493296 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
FMOD-203ENST00000493296 NACADO15069 1562 aa20.42■□□□□ 0.86
FMOD-203ENST00000493296 ZCCHC6Q5VYS8 1495 aaKnown RBP20.26■□□□□ 0.83
FMOD-203ENST00000493296 MYO15BQ96JP2 1530 aa20.19■□□□□ 0.82
FMOD-203ENST00000493296 PABPN1Q86U42 306 aaKnown RBP eCLIP20.17■□□□□ 0.82
FMOD-203ENST00000493296 DCAF1Q9Y4B6 1507 aa20.07■□□□□ 0.8
FMOD-203ENST00000493296 DNAJC5BQ9UF47 199 aa20■□□□□ 0.79
FMOD-203ENST00000493296 UNC13AQ9UPW8 1703 aa19.99■□□□□ 0.79
FMOD-203ENST00000493296 BICRAQ9NZM4 1560 aa19.94■□□□□ 0.78
FMOD-203ENST00000493296 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
FMOD-203ENST00000493296 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
FMOD-203ENST00000493296 EIF4G1Q04637 1599 aaKnown RBP19.4■□□□□ 0.7
FMOD-203ENST00000493296 CC2D2AQ9P2K1 1620 aa19.38■□□□□ 0.69
FMOD-203ENST00000493296 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
FMOD-203ENST00000493296 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
FMOD-203ENST00000493296 ATAD2BQ9ULI0 1458 aa18.91■□□□□ 0.62
FMOD-203ENST00000493296 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
FMOD-203ENST00000493296 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
FMOD-203ENST00000493296 MROH2BQ7Z745 1585 aa18.85■□□□□ 0.61
FMOD-203ENST00000493296 SMARCA2P51531 1590 aa18.8■□□□□ 0.6
FMOD-203ENST00000493296 BAZ1BQ9UIG0 1483 aaKnown RBP18.73■□□□□ 0.59
FMOD-203ENST00000493296 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
FMOD-203ENST00000493296 PEG3Q9GZU2 1588 aa18.69■□□□□ 0.58
FMOD-203ENST00000493296 WIZO95785 1651 aa18.61■□□□□ 0.57
FMOD-203ENST00000493296 NESP48681 1621 aa18.59■□□□□ 0.57
FMOD-203ENST00000493296 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
FMOD-203ENST00000493296 ERCC6Q03468 1493 aa18.51■□□□□ 0.55
FMOD-203ENST00000493296 CADPSQ9ULU8 1353 aa18.37■□□□□ 0.53
FMOD-203ENST00000493296 LAMC3Q9Y6N6 1575 aa18.36■□□□□ 0.53
FMOD-203ENST00000493296 TOP2AP11388 1531 aaKnown RBP18.35■□□□□ 0.53
FMOD-203ENST00000493296 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
FMOD-203ENST00000493296 CUX2O14529 1486 aa18.29■□□□□ 0.52
FMOD-203ENST00000493296 KIF21AQ7Z4S6 1674 aa18.24■□□□□ 0.51
FMOD-203ENST00000493296 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
FMOD-203ENST00000493296 CCDC88BA6NC98 1476 aa18.22■□□□□ 0.51
FMOD-203ENST00000493296 CFTRP13569 1480 aa18.2■□□□□ 0.5
FMOD-203ENST00000493296 FANCD2Q9BXW9 1451 aa18.16■□□□□ 0.5
FMOD-203ENST00000493296 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
FMOD-203ENST00000493296 CEP164Q9UPV0 1460 aa18.12■□□□□ 0.49
FMOD-203ENST00000493296 SUPT5HO00267 1087 aaKnown RBP18.11■□□□□ 0.49
FMOD-203ENST00000493296 WDR62O43379 1518 aa18.04■□□□□ 0.48
FMOD-203ENST00000493296 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
FMOD-203ENST00000493296 URB2Q14146 1524 aaKnown RBP18.01■□□□□ 0.47
FMOD-203ENST00000493296 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
FMOD-203ENST00000493296 TOPBP1Q92547 1522 aa17.84■□□□□ 0.45
FMOD-203ENST00000493296 ZNF608Q9ULD9 1512 aaPredicted RBP17.77■□□□□ 0.43
FMOD-203ENST00000493296 DNMBPQ6XZF7 1577 aa17.76■□□□□ 0.43
FMOD-203ENST00000493296 IFT140Q96RY7 1462 aa17.74■□□□□ 0.43
FMOD-203ENST00000493296 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
FMOD-203ENST00000493296 POLA1P09884 1462 aaPredicted RBP17.69■□□□□ 0.42
FMOD-203ENST00000493296 RAD54L2Q9Y4B4 1467 aa17.69■□□□□ 0.42
FMOD-203ENST00000493296 CUX1P39880 1505 aa17.67■□□□□ 0.42
FMOD-203ENST00000493296 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.42
FMOD-203ENST00000493296 SOGA1O94964 1423 aa17.64■□□□□ 0.42
FMOD-203ENST00000493296 FGD5Q6ZNL6 1462 aa17.63■□□□□ 0.41
FMOD-203ENST00000493296 TARBP1Q13395 1621 aaKnown RBP17.63■□□□□ 0.41
FMOD-203ENST00000493296 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
FMOD-203ENST00000493296 OSCARQ8IYS5 282 aa17.6■□□□□ 0.41
FMOD-203ENST00000493296 EIF4G3O43432 1585 aaKnown RBP17.59■□□□□ 0.41
FMOD-203ENST00000493296 FBLN2P98095 1184 aa17.52■□□□□ 0.4
FMOD-203ENST00000493296 WRNQ14191 1432 aaPredicted RBP eCLIP17.49■□□□□ 0.39
FMOD-203ENST00000493296 SYNJ1O43426 1573 aa17.46■□□□□ 0.39
FMOD-203ENST00000493296 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
FMOD-203ENST00000493296 SNAPC4Q5SXM2 1469 aa17.44■□□□□ 0.38
FMOD-203ENST00000493296 ABCA10Q8WWZ4 1543 aa17.42■□□□□ 0.38
FMOD-203ENST00000493296 TOP2BQ02880 1626 aa17.41■□□□□ 0.38
FMOD-203ENST00000493296 GRIN2BQ13224 1484 aa17.41■□□□□ 0.38
FMOD-203ENST00000493296 GAPVD1Q14C86 1478 aa17.4■□□□□ 0.38
FMOD-203ENST00000493296 WDR97A6NE52 1622 aa17.39■□□□□ 0.38
FMOD-203ENST00000493296 BIVM-ERCC5R4GMW8 1640 aa17.39■□□□□ 0.37
FMOD-203ENST00000493296 CHMP7Q8WUX9 453 aaPredicted RBP17.38■□□□□ 0.37
FMOD-203ENST00000493296 CHD1O14646 1710 aa17.38■□□□□ 0.37
FMOD-203ENST00000493296 MAGI1Q96QZ7 1491 aaPredicted RBP17.34■□□□□ 0.37
FMOD-203ENST00000493296 ABCA5Q8WWZ7 1642 aa17.33■□□□□ 0.37
FMOD-203ENST00000493296 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
FMOD-203ENST00000493296 PBRM1Q86U86 1689 aa17.29■□□□□ 0.36
FMOD-203ENST00000493296 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
FMOD-203ENST00000493296 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
FMOD-203ENST00000493296 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
FMOD-203ENST00000493296 ARHGEF11O15085 1522 aa17.28■□□□□ 0.36
FMOD-203ENST00000493296 CYB5RLQ6IPT4 315 aa17.24■□□□□ 0.35
FMOD-203ENST00000493296 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
FMOD-203ENST00000493296 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
FMOD-203ENST00000493296 ADAMTS12P58397 1594 aa17.19■□□□□ 0.34
FMOD-203ENST00000493296 GRIN2AQ12879 1464 aa17.18■□□□□ 0.34
FMOD-203ENST00000493296 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
FMOD-203ENST00000493296 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
FMOD-203ENST00000493296 IGF1RP08069 1367 aa17.14■□□□□ 0.33
FMOD-203ENST00000493296 CEP170Q5SW79 1584 aa17.12■□□□□ 0.33
FMOD-203ENST00000493296 KIF27Q86VH2 1401 aa17.12■□□□□ 0.33
FMOD-203ENST00000493296 NUP160Q12769 1436 aa17.11■□□□□ 0.33
FMOD-203ENST00000493296 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
FMOD-203ENST00000493296 RUSC2Q8N2Y8 1516 aa17.04■□□□□ 0.32
FMOD-203ENST00000493296 JPH4Q96JJ6 628 aa17.01■□□□□ 0.31
FMOD-203ENST00000493296 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
FMOD-203ENST00000493296 PRG4Q92954 1404 aaPredicted RBP16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms