RNA–Protein interactions for RNA: ENST00000493121.5

SLC1A4-204, Transcript of solute carrier family 1 member 4, humanhuman

TSL 5

Gene SLC1A4, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-204ENST00000493121 NISCHQ9Y2I1 1504 aa36.6■■■■□ 3.45
SLC1A4-204ENST00000493121 CCDC180Q9P1Z9 1646 aa32.19■■■□□ 2.74
SLC1A4-204ENST00000493121 ABCC9O60706 1549 aa31.14■■■□□ 2.58
SLC1A4-204ENST00000493121 ZCCHC6Q5VYS8 1495 aaKnown RBP30.59■■■□□ 2.49
SLC1A4-204ENST00000493121 DCAF8L2P0C7V8 631 aa30.58■■■□□ 2.49
SLC1A4-204ENST00000493121 DCAF1Q9Y4B6 1507 aa30.22■■■□□ 2.43
SLC1A4-204ENST00000493121 NACADO15069 1562 aa30.18■■■□□ 2.42
SLC1A4-204ENST00000493121 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
SLC1A4-204ENST00000493121 RB1CC1Q8TDY2 1594 aa30.1■■■□□ 2.41
SLC1A4-204ENST00000493121 SCRIBQ14160 1630 aa29.56■■■□□ 2.32
SLC1A4-204ENST00000493121 SHROOM4Q9ULL8 1493 aa29.46■■■□□ 2.31
SLC1A4-204ENST00000493121 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
SLC1A4-204ENST00000493121 PABPN1Q86U42 306 aaKnown RBP eCLIP29.27■■■□□ 2.28
SLC1A4-204ENST00000493121 BICRAQ9NZM4 1560 aa29.16■■■□□ 2.26
SLC1A4-204ENST00000493121 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
SLC1A4-204ENST00000493121 EIF4G1Q04637 1599 aaKnown RBP28.37■■■□□ 2.13
SLC1A4-204ENST00000493121 BAZ1AQ9NRL2 1556 aaPredicted RBP28.32■■■□□ 2.12
SLC1A4-204ENST00000493121 SMARCA4P51532 1647 aa28.26■■■□□ 2.11
SLC1A4-204ENST00000493121 MROH2BQ7Z745 1585 aa28.26■■■□□ 2.11
SLC1A4-204ENST00000493121 RSF1Q96T23 1441 aaPredicted RBP28.15■■■□□ 2.1
SLC1A4-204ENST00000493121 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
SLC1A4-204ENST00000493121 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.09
SLC1A4-204ENST00000493121 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
SLC1A4-204ENST00000493121 ATAD2BQ9ULI0 1458 aa28■■■□□ 2.07
SLC1A4-204ENST00000493121 WIZO95785 1651 aa27.97■■■□□ 2.07
SLC1A4-204ENST00000493121 SMARCA2P51531 1590 aa27.96■■■□□ 2.07
SLC1A4-204ENST00000493121 PEG3Q9GZU2 1588 aa27.91■■■□□ 2.06
SLC1A4-204ENST00000493121 NCAPD3P42695 1498 aa27.86■■■□□ 2.05
SLC1A4-204ENST00000493121 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
SLC1A4-204ENST00000493121 HMGXB3Q12766 1538 aa27.75■■■□□ 2.03
SLC1A4-204ENST00000493121 TOP2AP11388 1531 aaKnown RBP27.68■■■□□ 2.02
SLC1A4-204ENST00000493121 CCDC88BA6NC98 1476 aa27.4■■□□□ 1.98
SLC1A4-204ENST00000493121 CADPSQ9ULU8 1353 aa27.13■■□□□ 1.93
SLC1A4-204ENST00000493121 NESP48681 1621 aa27.1■■□□□ 1.93
SLC1A4-204ENST00000493121 CFTRP13569 1480 aa27.06■■□□□ 1.92
SLC1A4-204ENST00000493121 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
SLC1A4-204ENST00000493121 PDS5BQ9NTI5 1447 aa26.88■■□□□ 1.89
SLC1A4-204ENST00000493121 FANCD2Q9BXW9 1451 aa26.82■■□□□ 1.88
SLC1A4-204ENST00000493121 PRDM2Q13029 1718 aa26.8■■□□□ 1.88
SLC1A4-204ENST00000493121 ERCC6Q03468 1493 aa26.79■■□□□ 1.88
SLC1A4-204ENST00000493121 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
SLC1A4-204ENST00000493121 KIF21AQ7Z4S6 1674 aa26.72■■□□□ 1.87
SLC1A4-204ENST00000493121 ABCC8Q09428 1581 aa26.6■■□□□ 1.85
SLC1A4-204ENST00000493121 MRC2Q9UBG0 1479 aa26.56■■□□□ 1.84
SLC1A4-204ENST00000493121 WRNQ14191 1432 aaPredicted RBP eCLIP26.53■■□□□ 1.84
SLC1A4-204ENST00000493121 URB2Q14146 1524 aaKnown RBP26.51■■□□□ 1.83
SLC1A4-204ENST00000493121 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
SLC1A4-204ENST00000493121 CUX1P39880 1505 aa26.47■■□□□ 1.83
SLC1A4-204ENST00000493121 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
SLC1A4-204ENST00000493121 DNMBPQ6XZF7 1577 aa26.44■■□□□ 1.82
SLC1A4-204ENST00000493121 CHIC1Q5VXU3 224 aa26.43■■□□□ 1.82
SLC1A4-204ENST00000493121 WDR62O43379 1518 aa26.41■■□□□ 1.82
SLC1A4-204ENST00000493121 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
SLC1A4-204ENST00000493121 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
SLC1A4-204ENST00000493121 TOP2BQ02880 1626 aa26.35■■□□□ 1.81
SLC1A4-204ENST00000493121 BIVM-ERCC5R4GMW8 1640 aa26.32■■□□□ 1.8
SLC1A4-204ENST00000493121 FGD5Q6ZNL6 1462 aa26.3■■□□□ 1.8
SLC1A4-204ENST00000493121 POLA1P09884 1462 aaPredicted RBP26.26■■□□□ 1.79
SLC1A4-204ENST00000493121 CUX2O14529 1486 aa26.21■■□□□ 1.79
SLC1A4-204ENST00000493121 SOGA1O94964 1423 aa26.21■■□□□ 1.79
SLC1A4-204ENST00000493121 RAD54L2Q9Y4B4 1467 aa26.2■■□□□ 1.78
SLC1A4-204ENST00000493121 IFT140Q96RY7 1462 aa26.13■■□□□ 1.77
SLC1A4-204ENST00000493121 TARBP1Q13395 1621 aaKnown RBP26.06■■□□□ 1.76
SLC1A4-204ENST00000493121 ABCA10Q8WWZ4 1543 aa26.03■■□□□ 1.76
SLC1A4-204ENST00000493121 TDRD9Q8NDG6 1382 aaKnown RBP26.02■■□□□ 1.76
SLC1A4-204ENST00000493121 ZNF608Q9ULD9 1512 aaPredicted RBP26■■□□□ 1.75
SLC1A4-204ENST00000493121 AQRO60306 1485 aaKnown RBP eCLIP25.96■■□□□ 1.75
SLC1A4-204ENST00000493121 WDR97A6NE52 1622 aa25.96■■□□□ 1.75
SLC1A4-204ENST00000493121 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
SLC1A4-204ENST00000493121 FAM9AQ8IZU1 332 aaPredicted RBP25.92■■□□□ 1.74
SLC1A4-204ENST00000493121 RUSC2Q8N2Y8 1516 aa25.91■■□□□ 1.74
SLC1A4-204ENST00000493121 GAPVD1Q14C86 1478 aa25.89■■□□□ 1.73
SLC1A4-204ENST00000493121 EIF4G3O43432 1585 aaKnown RBP25.87■■□□□ 1.73
SLC1A4-204ENST00000493121 ABCA5Q8WWZ7 1642 aa25.85■■□□□ 1.73
SLC1A4-204ENST00000493121 GRIN2BQ13224 1484 aa25.79■■□□□ 1.72
SLC1A4-204ENST00000493121 EEA1Q15075 1411 aa25.78■■□□□ 1.72
SLC1A4-204ENST00000493121 IGF1RP08069 1367 aa25.76■■□□□ 1.71
SLC1A4-204ENST00000493121 CSRNP3Q8WYN3 585 aa25.75■■□□□ 1.71
SLC1A4-204ENST00000493121 PBRM1Q86U86 1689 aa25.74■■□□□ 1.71
SLC1A4-204ENST00000493121 ERICH3Q5RHP9 1530 aa25.72■■□□□ 1.71
SLC1A4-204ENST00000493121 SNAPC4Q5SXM2 1469 aa25.72■■□□□ 1.71
SLC1A4-204ENST00000493121 CARMIL1Q5VZK9 1371 aa25.65■■□□□ 1.7
SLC1A4-204ENST00000493121 MAGI1Q96QZ7 1491 aaPredicted RBP25.64■■□□□ 1.69
SLC1A4-204ENST00000493121 FBLN2P98095 1184 aa25.63■■□□□ 1.69
SLC1A4-204ENST00000493121 EHMT2Q96KQ7 1210 aa25.61■■□□□ 1.69
SLC1A4-204ENST00000493121 FHAD1B1AJZ9 1412 aa25.61■■□□□ 1.69
SLC1A4-204ENST00000493121 CHMP7Q8WUX9 453 aaPredicted RBP25.59■■□□□ 1.69
SLC1A4-204ENST00000493121 ADAMTS12P58397 1594 aa25.58■■□□□ 1.69
SLC1A4-204ENST00000493121 CUL7Q14999 1698 aa25.58■■□□□ 1.68
SLC1A4-204ENST00000493121 SYNJ2O15056 1496 aa25.54■■□□□ 1.68
SLC1A4-204ENST00000493121 PRXQ9BXM0 1461 aa25.54■■□□□ 1.68
SLC1A4-204ENST00000493121 RAPGEF2Q9Y4G8 1499 aa25.53■■□□□ 1.68
SLC1A4-204ENST00000493121 GRIN2AQ12879 1464 aa25.46■■□□□ 1.67
SLC1A4-204ENST00000493121 KIF21BO75037 1637 aa25.45■■□□□ 1.66
SLC1A4-204ENST00000493121 CHD1O14646 1710 aa25.43■■□□□ 1.66
SLC1A4-204ENST00000493121 LOC105371045A0A1W2PR82 267 aa25.42■■□□□ 1.66
SLC1A4-204ENST00000493121 GOLGA3Q08378 1498 aa25.4■■□□□ 1.66
SLC1A4-204ENST00000493121 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
SLC1A4-204ENST00000493121 OSCARQ8IYS5 282 aa25.33■■□□□ 1.65
SLC1A4-204ENST00000493121 NUP160Q12769 1436 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms