RNA–Protein interactions for RNA: ENST00000493114.1

IRF4-204, Transcript of interferon regulatory factor 4, humanhuman

TSL 5

Gene IRF4, Length 1,607 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF4-204ENST00000493114 NISCHQ9Y2I1 1504 aa51.54■■■■■ 5.84
IRF4-204ENST00000493114 CCDC180Q9P1Z9 1646 aa45.03■■■■■ 4.8
IRF4-204ENST00000493114 ABCC9O60706 1549 aa43.94■■■■■ 4.63
IRF4-204ENST00000493114 ZCCHC6Q5VYS8 1495 aaKnown RBP43.33■■■■■ 4.53
IRF4-204ENST00000493114 DCAF1Q9Y4B6 1507 aa42.65■■■■■ 4.42
IRF4-204ENST00000493114 DCAF8L2P0C7V8 631 aa42.38■■■■■ 4.38
IRF4-204ENST00000493114 RB1CC1Q8TDY2 1594 aa42.27■■■■■ 4.36
IRF4-204ENST00000493114 NACADO15069 1562 aa42.19■■■■■ 4.35
IRF4-204ENST00000493114 MYO15BQ96JP2 1530 aa42.14■■■■■ 4.34
IRF4-204ENST00000493114 SHROOM4Q9ULL8 1493 aa41.96■■■■■ 4.31
IRF4-204ENST00000493114 SCRIBQ14160 1630 aa41.35■■■■■ 4.21
IRF4-204ENST00000493114 UNC13AQ9UPW8 1703 aa41.33■■■■■ 4.21
IRF4-204ENST00000493114 PABPN1Q86U42 306 aaKnown RBP eCLIP41.04■■■■■ 4.16
IRF4-204ENST00000493114 BICRAQ9NZM4 1560 aa40.96■■■■■ 4.15
IRF4-204ENST00000493114 DNAJC5BQ9UF47 199 aa40.4■■■■■ 4.06
IRF4-204ENST00000493114 SUPT5HO00267 1087 aaKnown RBP40.34■■■■■ 4.05
IRF4-204ENST00000493114 CECR2Q9BXF3 1484 aa40.02■■■■■ 4
IRF4-204ENST00000493114 RSF1Q96T23 1441 aaPredicted RBP39.96■■■■□ 3.99
IRF4-204ENST00000493114 EIF4G1Q04637 1599 aaKnown RBP39.9■■■■□ 3.98
IRF4-204ENST00000493114 MROH2BQ7Z745 1585 aa39.82■■■■□ 3.96
IRF4-204ENST00000493114 BAZ1AQ9NRL2 1556 aaPredicted RBP39.81■■■■□ 3.96
IRF4-204ENST00000493114 CC2D2AQ9P2K1 1620 aa39.77■■■■□ 3.96
IRF4-204ENST00000493114 SMARCA4P51532 1647 aa39.66■■■■□ 3.94
IRF4-204ENST00000493114 WIZO95785 1651 aa39.53■■■■□ 3.92
IRF4-204ENST00000493114 PEG3Q9GZU2 1588 aa39.18■■■■□ 3.86
IRF4-204ENST00000493114 TOP2AP11388 1531 aaKnown RBP39.12■■■■□ 3.85
IRF4-204ENST00000493114 SMARCA2P51531 1590 aa38.95■■■■□ 3.83
IRF4-204ENST00000493114 ATAD2BQ9ULI0 1458 aa38.95■■■■□ 3.83
IRF4-204ENST00000493114 NCAPD3P42695 1498 aa38.92■■■■□ 3.82
IRF4-204ENST00000493114 BAZ1BQ9UIG0 1483 aaKnown RBP38.73■■■■□ 3.79
IRF4-204ENST00000493114 HMGXB3Q12766 1538 aa38.72■■■■□ 3.79
IRF4-204ENST00000493114 CCDC88BA6NC98 1476 aa38.67■■■■□ 3.78
IRF4-204ENST00000493114 CHIC1Q5VXU3 224 aa38.66■■■■□ 3.78
IRF4-204ENST00000493114 NESP48681 1621 aa37.99■■■■□ 3.67
IRF4-204ENST00000493114 TRIM41Q8WV44 630 aa37.94■■■■□ 3.66
IRF4-204ENST00000493114 LAMC3Q9Y6N6 1575 aa37.93■■■■□ 3.66
IRF4-204ENST00000493114 ERCC6Q03468 1493 aa37.91■■■■□ 3.66
IRF4-204ENST00000493114 ABCC8Q09428 1581 aa37.89■■■■□ 3.66
IRF4-204ENST00000493114 CADPSQ9ULU8 1353 aa37.77■■■■□ 3.64
IRF4-204ENST00000493114 CFTRP13569 1480 aa37.76■■■■□ 3.63
IRF4-204ENST00000493114 PRDM2Q13029 1718 aa37.71■■■■□ 3.63
IRF4-204ENST00000493114 PDS5BQ9NTI5 1447 aa37.67■■■■□ 3.62
IRF4-204ENST00000493114 WRNQ14191 1432 aaPredicted RBP eCLIP37.61■■■■□ 3.61
IRF4-204ENST00000493114 KIF21AQ7Z4S6 1674 aa37.58■■■■□ 3.61
IRF4-204ENST00000493114 CUX2O14529 1486 aa37.55■■■■□ 3.6
IRF4-204ENST00000493114 SYNJ1O43426 1573 aa37.51■■■■□ 3.6
IRF4-204ENST00000493114 THOC2Q8NI27 1593 aaKnown RBP37.46■■■■□ 3.59
IRF4-204ENST00000493114 TOP2BQ02880 1626 aa37.36■■■■□ 3.57
IRF4-204ENST00000493114 BIVM-ERCC5R4GMW8 1640 aa37.36■■■■□ 3.57
IRF4-204ENST00000493114 FANCD2Q9BXW9 1451 aa37.34■■■■□ 3.57
IRF4-204ENST00000493114 CEP164Q9UPV0 1460 aa37.31■■■■□ 3.56
IRF4-204ENST00000493114 MRC2Q9UBG0 1479 aa37.27■■■■□ 3.56
IRF4-204ENST00000493114 CUX1P39880 1505 aa37.25■■■■□ 3.55
IRF4-204ENST00000493114 FAM9AQ8IZU1 332 aaPredicted RBP37.23■■■■□ 3.55
IRF4-204ENST00000493114 WDR62O43379 1518 aa37.16■■■■□ 3.54
IRF4-204ENST00000493114 LOC105371045A0A1W2PR82 267 aa37.14■■■■□ 3.54
IRF4-204ENST00000493114 SOGA1O94964 1423 aa37.13■■■■□ 3.53
IRF4-204ENST00000493114 EEA1Q15075 1411 aa37.1■■■■□ 3.53
IRF4-204ENST00000493114 RUSC2Q8N2Y8 1516 aa37■■■■□ 3.51
IRF4-204ENST00000493114 URB2Q14146 1524 aaKnown RBP36.96■■■■□ 3.51
IRF4-204ENST00000493114 DNMBPQ6XZF7 1577 aa36.93■■■■□ 3.5
IRF4-204ENST00000493114 TOPBP1Q92547 1522 aa36.83■■■■□ 3.49
IRF4-204ENST00000493114 FGD5Q6ZNL6 1462 aa36.82■■■■□ 3.48
IRF4-204ENST00000493114 CSRNP3Q8WYN3 585 aa36.81■■■■□ 3.48
IRF4-204ENST00000493114 EHMT2Q96KQ7 1210 aa36.67■■■■□ 3.46
IRF4-204ENST00000493114 KIF21BO75037 1637 aa36.67■■■■□ 3.46
IRF4-204ENST00000493114 KIF27Q86VH2 1401 aa36.65■■■■□ 3.46
IRF4-204ENST00000493114 POLA1P09884 1462 aaPredicted RBP36.64■■■■□ 3.46
IRF4-204ENST00000493114 GOLGA3Q08378 1498 aa36.59■■■■□ 3.45
IRF4-204ENST00000493114 IFT140Q96RY7 1462 aa36.54■■■■□ 3.44
IRF4-204ENST00000493114 DNAJC5Q9H3Z4 198 aa36.52■■■■□ 3.44
IRF4-204ENST00000493114 ABCA10Q8WWZ4 1543 aa36.51■■■■□ 3.43
IRF4-204ENST00000493114 RAD54L2Q9Y4B4 1467 aa36.5■■■■□ 3.43
IRF4-204ENST00000493114 WDR97A6NE52 1622 aa36.48■■■■□ 3.43
IRF4-204ENST00000493114 TNIKQ9UKE5 1360 aa36.45■■■■□ 3.43
IRF4-204ENST00000493114 PRXQ9BXM0 1461 aa36.43■■■■□ 3.42
IRF4-204ENST00000493114 ERICH3Q5RHP9 1530 aa36.41■■■■□ 3.42
IRF4-204ENST00000493114 RAPGEF2Q9Y4G8 1499 aa36.39■■■■□ 3.42
IRF4-204ENST00000493114 ZNF608Q9ULD9 1512 aaPredicted RBP36.36■■■■□ 3.41
IRF4-204ENST00000493114 TARBP1Q13395 1621 aaKnown RBP36.35■■■■□ 3.41
IRF4-204ENST00000493114 UBTFP17480 764 aaKnown RBP36.31■■■■□ 3.4
IRF4-204ENST00000493114 IGF1RP08069 1367 aa36.3■■■■□ 3.4
IRF4-204ENST00000493114 CEP162Q5TB80 1403 aa36.27■■■■□ 3.4
IRF4-204ENST00000493114 ABCA5Q8WWZ7 1642 aa36.26■■■■□ 3.4
IRF4-204ENST00000493114 EIF4G3O43432 1585 aaKnown RBP36.23■■■■□ 3.39
IRF4-204ENST00000493114 AQRO60306 1485 aaKnown RBP eCLIP36.14■■■■□ 3.38
IRF4-204ENST00000493114 CUL7Q14999 1698 aa36.13■■■■□ 3.37
IRF4-204ENST00000493114 CARMIL1Q5VZK9 1371 aa36.12■■■■□ 3.37
IRF4-204ENST00000493114 TDRD9Q8NDG6 1382 aaKnown RBP36.12■■■■□ 3.37
IRF4-204ENST00000493114 GAPVD1Q14C86 1478 aa36.1■■■■□ 3.37
IRF4-204ENST00000493114 PBRM1Q86U86 1689 aa36■■■■□ 3.35
IRF4-204ENST00000493114 OSCARQ8IYS5 282 aa35.99■■■■□ 3.35
IRF4-204ENST00000493114 CLIP1P30622 1438 aa35.97■■■■□ 3.35
IRF4-204ENST00000493114 GRIN2BQ13224 1484 aa35.86■■■■□ 3.33
IRF4-204ENST00000493114 CHD1O14646 1710 aa35.82■■■■□ 3.32
IRF4-204ENST00000493114 SNAPC4Q5SXM2 1469 aa35.8■■■■□ 3.32
IRF4-204ENST00000493114 ADAMTS12P58397 1594 aa35.79■■■■□ 3.32
IRF4-204ENST00000493114 MAGI1Q96QZ7 1491 aaPredicted RBP35.78■■■■□ 3.32
IRF4-204ENST00000493114 CTTNBP2Q8WZ74 1663 aa35.77■■■■□ 3.32
IRF4-204ENST00000493114 FBLN2P98095 1184 aa35.75■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms