RNA–Protein interactions for RNA: ENST00000493082.5

BRD9-210, Transcript of bromodomain containing 9, humanhuman

TSL 5

Gene BRD9, Length 750 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-210ENST00000493082 NISCHQ9Y2I1 1504 aa31.54■■■□□ 2.64
BRD9-210ENST00000493082 CCDC180Q9P1Z9 1646 aa27.93■■■□□ 2.06
BRD9-210ENST00000493082 ABCC9O60706 1549 aa27.01■■□□□ 1.91
BRD9-210ENST00000493082 ZCCHC6Q5VYS8 1495 aaKnown RBP26.36■■□□□ 1.81
BRD9-210ENST00000493082 DCAF8L2P0C7V8 631 aa26.18■■□□□ 1.78
BRD9-210ENST00000493082 NACADO15069 1562 aa26.1■■□□□ 1.77
BRD9-210ENST00000493082 RB1CC1Q8TDY2 1594 aa26.07■■□□□ 1.76
BRD9-210ENST00000493082 DCAF1Q9Y4B6 1507 aa26.04■■□□□ 1.76
BRD9-210ENST00000493082 MYO15BQ96JP2 1530 aa25.98■■□□□ 1.75
BRD9-210ENST00000493082 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
BRD9-210ENST00000493082 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
BRD9-210ENST00000493082 BICRAQ9NZM4 1560 aa25.37■■□□□ 1.65
BRD9-210ENST00000493082 PABPN1Q86U42 306 aaKnown RBP eCLIP25.27■■□□□ 1.64
BRD9-210ENST00000493082 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
BRD9-210ENST00000493082 EIF4G1Q04637 1599 aaKnown RBP24.63■■□□□ 1.53
BRD9-210ENST00000493082 CECR2Q9BXF3 1484 aa24.59■■□□□ 1.53
BRD9-210ENST00000493082 CC2D2AQ9P2K1 1620 aa24.48■■□□□ 1.51
BRD9-210ENST00000493082 DNAJC5BQ9UF47 199 aa24.47■■□□□ 1.51
BRD9-210ENST00000493082 SMARCA4P51532 1647 aa24.46■■□□□ 1.51
BRD9-210ENST00000493082 BAZ1AQ9NRL2 1556 aaPredicted RBP24.39■■□□□ 1.5
BRD9-210ENST00000493082 MROH2BQ7Z745 1585 aa24.37■■□□□ 1.49
BRD9-210ENST00000493082 WIZO95785 1651 aa24.21■■□□□ 1.47
BRD9-210ENST00000493082 ATAD2BQ9ULI0 1458 aa24.16■■□□□ 1.46
BRD9-210ENST00000493082 RSF1Q96T23 1441 aaPredicted RBP24.14■■□□□ 1.45
BRD9-210ENST00000493082 PEG3Q9GZU2 1588 aa24.14■■□□□ 1.45
BRD9-210ENST00000493082 SMARCA2P51531 1590 aa24.12■■□□□ 1.45
BRD9-210ENST00000493082 NCAPD3P42695 1498 aa24.04■■□□□ 1.44
BRD9-210ENST00000493082 HMGXB3Q12766 1538 aa24.01■■□□□ 1.43
BRD9-210ENST00000493082 BAZ1BQ9UIG0 1483 aaKnown RBP23.99■■□□□ 1.43
BRD9-210ENST00000493082 TOP2AP11388 1531 aaKnown RBP23.85■■□□□ 1.41
BRD9-210ENST00000493082 SUPT5HO00267 1087 aaKnown RBP23.81■■□□□ 1.4
BRD9-210ENST00000493082 CCDC88BA6NC98 1476 aa23.56■■□□□ 1.36
BRD9-210ENST00000493082 NESP48681 1621 aa23.51■■□□□ 1.35
BRD9-210ENST00000493082 LAMC3Q9Y6N6 1575 aa23.41■■□□□ 1.34
BRD9-210ENST00000493082 PRDM2Q13029 1718 aa23.39■■□□□ 1.34
BRD9-210ENST00000493082 CADPSQ9ULU8 1353 aa23.36■■□□□ 1.33
BRD9-210ENST00000493082 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
BRD9-210ENST00000493082 CFTRP13569 1480 aa23.31■■□□□ 1.32
BRD9-210ENST00000493082 ERCC6Q03468 1493 aa23.18■■□□□ 1.3
BRD9-210ENST00000493082 FANCD2Q9BXW9 1451 aa23.15■■□□□ 1.3
BRD9-210ENST00000493082 PDS5BQ9NTI5 1447 aa23.15■■□□□ 1.3
BRD9-210ENST00000493082 THOC2Q8NI27 1593 aaKnown RBP23.1■■□□□ 1.29
BRD9-210ENST00000493082 CEP164Q9UPV0 1460 aa23.08■■□□□ 1.29
BRD9-210ENST00000493082 MRC2Q9UBG0 1479 aa22.98■■□□□ 1.27
BRD9-210ENST00000493082 URB2Q14146 1524 aaKnown RBP22.95■■□□□ 1.26
BRD9-210ENST00000493082 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
BRD9-210ENST00000493082 WDR62O43379 1518 aa22.92■■□□□ 1.26
BRD9-210ENST00000493082 DNMBPQ6XZF7 1577 aa22.85■■□□□ 1.25
BRD9-210ENST00000493082 CUX1P39880 1505 aa22.85■■□□□ 1.25
BRD9-210ENST00000493082 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
BRD9-210ENST00000493082 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
BRD9-210ENST00000493082 CUX2O14529 1486 aa22.78■■□□□ 1.24
BRD9-210ENST00000493082 BIVM-ERCC5R4GMW8 1640 aa22.76■■□□□ 1.23
BRD9-210ENST00000493082 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
BRD9-210ENST00000493082 TOP2BQ02880 1626 aa22.71■■□□□ 1.23
BRD9-210ENST00000493082 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
BRD9-210ENST00000493082 POLA1P09884 1462 aaPredicted RBP22.66■■□□□ 1.22
BRD9-210ENST00000493082 TARBP1Q13395 1621 aaKnown RBP22.62■■□□□ 1.21
BRD9-210ENST00000493082 RAD54L2Q9Y4B4 1467 aa22.61■■□□□ 1.21
BRD9-210ENST00000493082 WDR97A6NE52 1622 aa22.59■■□□□ 1.21
BRD9-210ENST00000493082 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
BRD9-210ENST00000493082 SOGA1O94964 1423 aa22.53■■□□□ 1.2
BRD9-210ENST00000493082 ZNF608Q9ULD9 1512 aaPredicted RBP22.52■■□□□ 1.2
BRD9-210ENST00000493082 EIF4G3O43432 1585 aaKnown RBP22.48■■□□□ 1.19
BRD9-210ENST00000493082 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
BRD9-210ENST00000493082 ABCA5Q8WWZ7 1642 aa22.41■■□□□ 1.18
BRD9-210ENST00000493082 AQRO60306 1485 aaKnown RBP eCLIP22.41■■□□□ 1.187e-7■■■■■ 39
BRD9-210ENST00000493082 PBRM1Q86U86 1689 aa22.4■■□□□ 1.18
BRD9-210ENST00000493082 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
BRD9-210ENST00000493082 TDRD9Q8NDG6 1382 aaKnown RBP22.39■■□□□ 1.18
BRD9-210ENST00000493082 TRIM41Q8WV44 630 aa22.39■■□□□ 1.17
BRD9-210ENST00000493082 GAPVD1Q14C86 1478 aa22.3■■□□□ 1.16
BRD9-210ENST00000493082 RUSC2Q8N2Y8 1516 aa22.27■■□□□ 1.16
BRD9-210ENST00000493082 CHD1O14646 1710 aa22.23■■□□□ 1.15
BRD9-210ENST00000493082 SNAPC4Q5SXM2 1469 aa22.22■■□□□ 1.15
BRD9-210ENST00000493082 GRIN2BQ13224 1484 aa22.22■■□□□ 1.15
BRD9-210ENST00000493082 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
BRD9-210ENST00000493082 ADAMTS12P58397 1594 aa22.16■■□□□ 1.14
BRD9-210ENST00000493082 ERICH3Q5RHP9 1530 aa22.16■■□□□ 1.14
BRD9-210ENST00000493082 MAGI1Q96QZ7 1491 aaPredicted RBP22.12■■□□□ 1.13
BRD9-210ENST00000493082 CUL7Q14999 1698 aa22.09■■□□□ 1.13
BRD9-210ENST00000493082 IGF1RP08069 1367 aa22.08■■□□□ 1.12
BRD9-210ENST00000493082 SYNJ2O15056 1496 aa22.04■■□□□ 1.12
BRD9-210ENST00000493082 FAM9AQ8IZU1 332 aaPredicted RBP22.04■■□□□ 1.12
BRD9-210ENST00000493082 FHAD1B1AJZ9 1412 aa22.01■■□□□ 1.11
BRD9-210ENST00000493082 FBLN2P98095 1184 aa22.01■■□□□ 1.11
BRD9-210ENST00000493082 GRIN2AQ12879 1464 aa21.97■■□□□ 1.11
BRD9-210ENST00000493082 CARMIL1Q5VZK9 1371 aa21.96■■□□□ 1.11
BRD9-210ENST00000493082 CHMP7Q8WUX9 453 aaPredicted RBP21.95■■□□□ 1.1
BRD9-210ENST00000493082 EEA1Q15075 1411 aa21.95■■□□□ 1.1
BRD9-210ENST00000493082 CEP170Q5SW79 1584 aa21.94■■□□□ 1.1
BRD9-210ENST00000493082 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
BRD9-210ENST00000493082 PRXQ9BXM0 1461 aa21.9■■□□□ 1.1
BRD9-210ENST00000493082 RAPGEF2Q9Y4G8 1499 aa21.88■■□□□ 1.09
BRD9-210ENST00000493082 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
BRD9-210ENST00000493082 KIF21BO75037 1637 aa21.85■■□□□ 1.09
BRD9-210ENST00000493082 NUP160Q12769 1436 aa21.84■■□□□ 1.09
BRD9-210ENST00000493082 OSCARQ8IYS5 282 aa21.84■■□□□ 1.09
BRD9-210ENST00000493082 CTTNBP2Q8WZ74 1663 aa21.84■■□□□ 1.09
BRD9-210ENST00000493082 EHMT2Q96KQ7 1210 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms