RNA–Protein interactions for RNA: ENST00000492778.5

CRAMP1-207, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-207ENST00000492778 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
CRAMP1-207ENST00000492778 ABCC9O60706 1549 aa19.42■□□□□ 0.7
CRAMP1-207ENST00000492778 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
CRAMP1-207ENST00000492778 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
CRAMP1-207ENST00000492778 DCAF8L2P0C7V8 631 aa18.56■□□□□ 0.56
CRAMP1-207ENST00000492778 RB1CC1Q8TDY2 1594 aa18.35■□□□□ 0.53
CRAMP1-207ENST00000492778 NACADO15069 1562 aa18.23■□□□□ 0.51
CRAMP1-207ENST00000492778 PABPN1Q86U42 306 aaKnown RBP eCLIP18.16■□□□□ 0.5
CRAMP1-207ENST00000492778 ZCCHC6Q5VYS8 1495 aaKnown RBP17.98■□□□□ 0.47
CRAMP1-207ENST00000492778 MYO15BQ96JP2 1530 aa17.94■□□□□ 0.46
CRAMP1-207ENST00000492778 DNAJC5Q9H3Z4 198 aa17.9■□□□□ 0.46
CRAMP1-207ENST00000492778 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
CRAMP1-207ENST00000492778 BICRAQ9NZM4 1560 aa17.8■□□□□ 0.44
CRAMP1-207ENST00000492778 DCAF1Q9Y4B6 1507 aa17.8■□□□□ 0.44
CRAMP1-207ENST00000492778 SCRIBQ14160 1630 aa17.76■□□□□ 0.43
CRAMP1-207ENST00000492778 CECR2Q9BXF3 1484 aa17.59■□□□□ 0.41
CRAMP1-207ENST00000492778 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
CRAMP1-207ENST00000492778 SHROOM4Q9ULL8 1493 aa17.46■□□□□ 0.39
CRAMP1-207ENST00000492778 EIF4G1Q04637 1599 aaKnown RBP17.38■□□□□ 0.37
CRAMP1-207ENST00000492778 CUX2O14529 1486 aa17.12■□□□□ 0.33
CRAMP1-207ENST00000492778 ATAD2BQ9ULI0 1458 aa16.88■□□□□ 0.29
CRAMP1-207ENST00000492778 NCAPD3P42695 1498 aa16.86■□□□□ 0.29
CRAMP1-207ENST00000492778 SMARCA4P51532 1647 aa16.86■□□□□ 0.29
CRAMP1-207ENST00000492778 BAZ1AQ9NRL2 1556 aaPredicted RBP16.8■□□□□ 0.28
CRAMP1-207ENST00000492778 ERCC6Q03468 1493 aa16.8■□□□□ 0.28
CRAMP1-207ENST00000492778 SMARCA2P51531 1590 aa16.79■□□□□ 0.28
CRAMP1-207ENST00000492778 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
CRAMP1-207ENST00000492778 BAZ1BQ9UIG0 1483 aaKnown RBP16.75■□□□□ 0.27
CRAMP1-207ENST00000492778 HMGXB3Q12766 1538 aa16.7■□□□□ 0.26
CRAMP1-207ENST00000492778 TRIM41Q8WV44 630 aa16.7■□□□□ 0.26
CRAMP1-207ENST00000492778 NESP48681 1621 aa16.67■□□□□ 0.26
CRAMP1-207ENST00000492778 PEG3Q9GZU2 1588 aa16.61■□□□□ 0.25
CRAMP1-207ENST00000492778 THOC2Q8NI27 1593 aaKnown RBP16.56■□□□□ 0.24
CRAMP1-207ENST00000492778 WIZO95785 1651 aa16.56■□□□□ 0.24
CRAMP1-207ENST00000492778 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
CRAMP1-207ENST00000492778 LAMC3Q9Y6N6 1575 aa16.43■□□□□ 0.22
CRAMP1-207ENST00000492778 CADPSQ9ULU8 1353 aa16.42■□□□□ 0.22
CRAMP1-207ENST00000492778 PDS5BQ9NTI5 1447 aa16.41■□□□□ 0.22
CRAMP1-207ENST00000492778 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
CRAMP1-207ENST00000492778 TOP2AP11388 1531 aaKnown RBP16.31■□□□□ 0.2
CRAMP1-207ENST00000492778 MRC2Q9UBG0 1479 aa16.25■□□□□ 0.19
CRAMP1-207ENST00000492778 FANCD2Q9BXW9 1451 aa16.24■□□□□ 0.19
CRAMP1-207ENST00000492778 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
CRAMP1-207ENST00000492778 CFTRP13569 1480 aa16.22■□□□□ 0.19
CRAMP1-207ENST00000492778 CCDC88BA6NC98 1476 aa16.2■□□□□ 0.18
CRAMP1-207ENST00000492778 WDR62O43379 1518 aa16.16■□□□□ 0.18
CRAMP1-207ENST00000492778 SUPT5HO00267 1087 aaKnown RBP16.09■□□□□ 0.17
CRAMP1-207ENST00000492778 URB2Q14146 1524 aaKnown RBP16.09■□□□□ 0.17
CRAMP1-207ENST00000492778 RIMBP3CA6NJZ7 1639 aa16.07■□□□□ 0.16
CRAMP1-207ENST00000492778 RIMBP3BA6NNM3 1639 aa16.07■□□□□ 0.16
CRAMP1-207ENST00000492778 RIMBP3Q9UFD9 1639 aa16.07■□□□□ 0.16
CRAMP1-207ENST00000492778 OSCARQ8IYS5 282 aa16.05■□□□□ 0.16
CRAMP1-207ENST00000492778 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
CRAMP1-207ENST00000492778 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
CRAMP1-207ENST00000492778 PRDM2Q13029 1718 aa15.92■□□□□ 0.14
CRAMP1-207ENST00000492778 ZNF608Q9ULD9 1512 aaPredicted RBP15.91■□□□□ 0.14
CRAMP1-207ENST00000492778 IFT140Q96RY7 1462 aa15.89■□□□□ 0.13
CRAMP1-207ENST00000492778 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
CRAMP1-207ENST00000492778 DNMBPQ6XZF7 1577 aa15.84■□□□□ 0.13
CRAMP1-207ENST00000492778 AEBP2Q6ZN18 517 aaPredicted RBP15.83■□□□□ 0.12
CRAMP1-207ENST00000492778 AQRO60306 1485 aaKnown RBP eCLIP15.82■□□□□ 0.126e-9■■■■□ 21.5
CRAMP1-207ENST00000492778 FBLN2P98095 1184 aa15.81■□□□□ 0.12
CRAMP1-207ENST00000492778 RAD54L2Q9Y4B4 1467 aa15.8■□□□□ 0.12
CRAMP1-207ENST00000492778 POLA1P09884 1462 aaPredicted RBP15.79■□□□□ 0.12
CRAMP1-207ENST00000492778 SOGA1O94964 1423 aa15.77■□□□□ 0.11
CRAMP1-207ENST00000492778 TDRD9Q8NDG6 1382 aaKnown RBP15.76■□□□□ 0.11
CRAMP1-207ENST00000492778 ARAP1Q96P48 1450 aa15.75■□□□□ 0.11
CRAMP1-207ENST00000492778 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
CRAMP1-207ENST00000492778 TRHP20396 242 aaPredicted RBP15.74■□□□□ 0.11
CRAMP1-207ENST00000492778 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
CRAMP1-207ENST00000492778 CYB5RLQ6IPT4 315 aa15.72■□□□□ 0.11
CRAMP1-207ENST00000492778 CUX1P39880 1505 aa15.72■□□□□ 0.11
CRAMP1-207ENST00000492778 TARBP1Q13395 1621 aaKnown RBP15.72■□□□□ 0.11
CRAMP1-207ENST00000492778 CHMP7Q8WUX9 453 aaPredicted RBP15.63■□□□□ 0.09
CRAMP1-207ENST00000492778 SNAPC4Q5SXM2 1469 aa15.62■□□□□ 0.09
CRAMP1-207ENST00000492778 CHD1O14646 1710 aa15.57■□□□□ 0.08
CRAMP1-207ENST00000492778 GRIN2BQ13224 1484 aa15.56■□□□□ 0.08
CRAMP1-207ENST00000492778 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
CRAMP1-207ENST00000492778 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
CRAMP1-207ENST00000492778 SYNJ1O43426 1573 aa15.5■□□□□ 0.07
CRAMP1-207ENST00000492778 ABCA10Q8WWZ4 1543 aa15.5■□□□□ 0.07
CRAMP1-207ENST00000492778 MAGI1Q96QZ7 1491 aaPredicted RBP15.5■□□□□ 0.07
CRAMP1-207ENST00000492778 SYNJ2O15056 1496 aa15.48■□□□□ 0.07
CRAMP1-207ENST00000492778 WDR97A6NE52 1622 aa15.47■□□□□ 0.07
CRAMP1-207ENST00000492778 TOP2BQ02880 1626 aa15.46■□□□□ 0.06
CRAMP1-207ENST00000492778 PBRM1Q86U86 1689 aa15.44■□□□□ 0.06
CRAMP1-207ENST00000492778 ABCA5Q8WWZ7 1642 aa15.43■□□□□ 0.06
CRAMP1-207ENST00000492778 BIVM-ERCC5R4GMW8 1640 aa15.42■□□□□ 0.06
CRAMP1-207ENST00000492778 CLASP1Q7Z460 1538 aa15.42■□□□□ 0.06
CRAMP1-207ENST00000492778 ILDR1Q86SU0 546 aaPredicted RBP15.39■□□□□ 0.05
CRAMP1-207ENST00000492778 GRIN2AQ12879 1464 aa15.36■□□□□ 0.05
CRAMP1-207ENST00000492778 FHAD1B1AJZ9 1412 aa15.34■□□□□ 0.05
CRAMP1-207ENST00000492778 ADAMTS12P58397 1594 aa15.33■□□□□ 0.05
CRAMP1-207ENST00000492778 CEP170Q5SW79 1584 aa15.29■□□□□ 0.04
CRAMP1-207ENST00000492778 ERICH3Q5RHP9 1530 aa15.28■□□□□ 0.04
CRAMP1-207ENST00000492778 NUP160Q12769 1436 aa15.27■□□□□ 0.04
CRAMP1-207ENST00000492778 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
CRAMP1-207ENST00000492778 KIF27Q86VH2 1401 aa15.25■□□□□ 0.03
CRAMP1-207ENST00000492778 JPH4Q96JJ6 628 aa15.23■□□□□ 0.03
CRAMP1-207ENST00000492778 IGF1RP08069 1367 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms