RNA–Protein interactions for RNA: ENST00000492515.1

LMNTD2-205, Transcript of lamin tail domain containing 2, humanhuman

TSL 4

Gene LMNTD2, Length 608 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD2-205ENST00000492515 NISCHQ9Y2I1 1504 aa25.82■■□□□ 1.72
LMNTD2-205ENST00000492515 ABCC9O60706 1549 aa22.98■■□□□ 1.27
LMNTD2-205ENST00000492515 CCDC180Q9P1Z9 1646 aa22.93■■□□□ 1.26
LMNTD2-205ENST00000492515 DCAF8L2P0C7V8 631 aa21.98■■□□□ 1.11
LMNTD2-205ENST00000492515 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
LMNTD2-205ENST00000492515 NACADO15069 1562 aa21.79■■□□□ 1.08
LMNTD2-205ENST00000492515 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
LMNTD2-205ENST00000492515 DNAJC5BQ9UF47 199 aa21.56■■□□□ 1.04
LMNTD2-205ENST00000492515 PABPN1Q86U42 306 aaKnown RBP eCLIP21.55■■□□□ 1.04
LMNTD2-205ENST00000492515 ZCCHC6Q5VYS8 1495 aaKnown RBP21.37■■□□□ 1.01
LMNTD2-205ENST00000492515 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
LMNTD2-205ENST00000492515 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
LMNTD2-205ENST00000492515 BICRAQ9NZM4 1560 aa21.19■□□□□ 0.98
LMNTD2-205ENST00000492515 SHROOM4Q9ULL8 1493 aa20.97■□□□□ 0.95
LMNTD2-205ENST00000492515 SCRIBQ14160 1630 aa20.94■□□□□ 0.94
LMNTD2-205ENST00000492515 CECR2Q9BXF3 1484 aa20.7■□□□□ 0.9
LMNTD2-205ENST00000492515 EIF4G1Q04637 1599 aaKnown RBP20.68■□□□□ 0.9
LMNTD2-205ENST00000492515 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
LMNTD2-205ENST00000492515 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
LMNTD2-205ENST00000492515 ATAD2BQ9ULI0 1458 aa20.12■□□□□ 0.81
LMNTD2-205ENST00000492515 SMARCA2P51531 1590 aa20.03■□□□□ 0.8
LMNTD2-205ENST00000492515 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
LMNTD2-205ENST00000492515 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
LMNTD2-205ENST00000492515 HMGXB3Q12766 1538 aa19.92■□□□□ 0.78
LMNTD2-205ENST00000492515 BAZ1BQ9UIG0 1483 aaKnown RBP19.91■□□□□ 0.78
LMNTD2-205ENST00000492515 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
LMNTD2-205ENST00000492515 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
LMNTD2-205ENST00000492515 PEG3Q9GZU2 1588 aa19.84■□□□□ 0.77
LMNTD2-205ENST00000492515 DNAJC5Q9H3Z4 198 aa19.75■□□□□ 0.75
LMNTD2-205ENST00000492515 NESP48681 1621 aa19.75■□□□□ 0.75
LMNTD2-205ENST00000492515 CUX2O14529 1486 aa19.74■□□□□ 0.75
LMNTD2-205ENST00000492515 CADPSQ9ULU8 1353 aa19.64■□□□□ 0.73
LMNTD2-205ENST00000492515 PDS5BQ9NTI5 1447 aa19.63■□□□□ 0.73
LMNTD2-205ENST00000492515 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
LMNTD2-205ENST00000492515 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
LMNTD2-205ENST00000492515 WIZO95785 1651 aa19.56■□□□□ 0.72
LMNTD2-205ENST00000492515 THOC2Q8NI27 1593 aaKnown RBP19.39■□□□□ 0.69
LMNTD2-205ENST00000492515 CFTRP13569 1480 aa19.37■□□□□ 0.69
LMNTD2-205ENST00000492515 KIF21AQ7Z4S6 1674 aa19.36■□□□□ 0.69
LMNTD2-205ENST00000492515 TOP2AP11388 1531 aaKnown RBP19.36■□□□□ 0.69
LMNTD2-205ENST00000492515 MRC2Q9UBG0 1479 aa19.35■□□□□ 0.69
LMNTD2-205ENST00000492515 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
LMNTD2-205ENST00000492515 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
LMNTD2-205ENST00000492515 CCDC88BA6NC98 1476 aa19.24■□□□□ 0.67
LMNTD2-205ENST00000492515 WDR62O43379 1518 aa19.24■□□□□ 0.67
LMNTD2-205ENST00000492515 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
LMNTD2-205ENST00000492515 OSCARQ8IYS5 282 aa19.07■□□□□ 0.64
LMNTD2-205ENST00000492515 ABCC8Q09428 1581 aa19■□□□□ 0.63
LMNTD2-205ENST00000492515 PRDM2Q13029 1718 aa18.97■□□□□ 0.63
LMNTD2-205ENST00000492515 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
LMNTD2-205ENST00000492515 IFT140Q96RY7 1462 aa18.96■□□□□ 0.63
LMNTD2-205ENST00000492515 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
LMNTD2-205ENST00000492515 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
LMNTD2-205ENST00000492515 ZNF608Q9ULD9 1512 aaPredicted RBP18.87■□□□□ 0.61
LMNTD2-205ENST00000492515 DNMBPQ6XZF7 1577 aa18.84■□□□□ 0.61
LMNTD2-205ENST00000492515 SOGA1O94964 1423 aa18.8■□□□□ 0.6
LMNTD2-205ENST00000492515 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.6
LMNTD2-205ENST00000492515 POLA1P09884 1462 aaPredicted RBP18.76■□□□□ 0.59
LMNTD2-205ENST00000492515 FBLN2P98095 1184 aa18.75■□□□□ 0.59
LMNTD2-205ENST00000492515 TDRD9Q8NDG6 1382 aaKnown RBP18.74■□□□□ 0.59
LMNTD2-205ENST00000492515 RAD54L2Q9Y4B4 1467 aa18.72■□□□□ 0.59
LMNTD2-205ENST00000492515 TARBP1Q13395 1621 aaKnown RBP18.68■□□□□ 0.58
LMNTD2-205ENST00000492515 FGD5Q6ZNL6 1462 aa18.66■□□□□ 0.58
LMNTD2-205ENST00000492515 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
LMNTD2-205ENST00000492515 CUX1P39880 1505 aa18.64■□□□□ 0.57
LMNTD2-205ENST00000492515 EIF4G3O43432 1585 aaKnown RBP18.64■□□□□ 0.57
LMNTD2-205ENST00000492515 CYB5RLQ6IPT4 315 aa18.59■□□□□ 0.57
LMNTD2-205ENST00000492515 GRIN2BQ13224 1484 aa18.55■□□□□ 0.56
LMNTD2-205ENST00000492515 SNAPC4Q5SXM2 1469 aa18.52■□□□□ 0.56
LMNTD2-205ENST00000492515 ARHGEF11O15085 1522 aa18.52■□□□□ 0.56
LMNTD2-205ENST00000492515 WDR97A6NE52 1622 aa18.52■□□□□ 0.55
LMNTD2-205ENST00000492515 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.55
LMNTD2-205ENST00000492515 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.55
LMNTD2-205ENST00000492515 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.55
LMNTD2-205ENST00000492515 WRNQ14191 1432 aaPredicted RBP eCLIP18.51■□□□□ 0.55
LMNTD2-205ENST00000492515 GAPVD1Q14C86 1478 aa18.51■□□□□ 0.55
LMNTD2-205ENST00000492515 MAGI1Q96QZ7 1491 aaPredicted RBP18.5■□□□□ 0.55
LMNTD2-205ENST00000492515 CHD1O14646 1710 aa18.49■□□□□ 0.55
LMNTD2-205ENST00000492515 ABCA10Q8WWZ4 1543 aa18.48■□□□□ 0.55
LMNTD2-205ENST00000492515 SYNJ2O15056 1496 aa18.46■□□□□ 0.54
LMNTD2-205ENST00000492515 SYNJ1O43426 1573 aa18.37■□□□□ 0.53
LMNTD2-205ENST00000492515 TOP2BQ02880 1626 aa18.35■□□□□ 0.53
LMNTD2-205ENST00000492515 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
LMNTD2-205ENST00000492515 TRHP20396 242 aaPredicted RBP18.34■□□□□ 0.53
LMNTD2-205ENST00000492515 CLASP1Q7Z460 1538 aa18.33■□□□□ 0.52
LMNTD2-205ENST00000492515 FHAD1B1AJZ9 1412 aa18.31■□□□□ 0.52
LMNTD2-205ENST00000492515 ABCA5Q8WWZ7 1642 aa18.31■□□□□ 0.52
LMNTD2-205ENST00000492515 BIVM-ERCC5R4GMW8 1640 aa18.29■□□□□ 0.52
LMNTD2-205ENST00000492515 PBRM1Q86U86 1689 aa18.28■□□□□ 0.52
LMNTD2-205ENST00000492515 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
LMNTD2-205ENST00000492515 ERICH3Q5RHP9 1530 aa18.23■□□□□ 0.51
LMNTD2-205ENST00000492515 NUP160Q12769 1436 aa18.23■□□□□ 0.51
LMNTD2-205ENST00000492515 JPH4Q96JJ6 628 aa18.22■□□□□ 0.51
LMNTD2-205ENST00000492515 IGF1RP08069 1367 aa18.18■□□□□ 0.5
LMNTD2-205ENST00000492515 ADAMTS12P58397 1594 aa18.16■□□□□ 0.5
LMNTD2-205ENST00000492515 KIF27Q86VH2 1401 aa18.15■□□□□ 0.5
LMNTD2-205ENST00000492515 CEP170Q5SW79 1584 aa18.13■□□□□ 0.49
LMNTD2-205ENST00000492515 PRG4Q92954 1404 aaPredicted RBP18.09■□□□□ 0.49
LMNTD2-205ENST00000492515 CARMIL1Q5VZK9 1371 aa18.05■□□□□ 0.48
LMNTD2-205ENST00000492515 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms