RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 NISCHQ9Y2I1 1504 aa33.72■■■□□ 2.99
MMP11-212ENST00000492464 CCDC180Q9P1Z9 1646 aa29.98■■■□□ 2.39
MMP11-212ENST00000492464 ABCC9O60706 1549 aa28.87■■■□□ 2.21
MMP11-212ENST00000492464 ZCCHC6Q5VYS8 1495 aaKnown RBP28.17■■■□□ 2.1
MMP11-212ENST00000492464 NACADO15069 1562 aa28.02■■■□□ 2.08
MMP11-212ENST00000492464 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
MMP11-212ENST00000492464 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
MMP11-212ENST00000492464 DCAF1Q9Y4B6 1507 aa27.93■■■□□ 2.06
MMP11-212ENST00000492464 MYO15BQ96JP2 1530 aa27.92■■■□□ 2.06
MMP11-212ENST00000492464 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
MMP11-212ENST00000492464 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
MMP11-212ENST00000492464 BICRAQ9NZM4 1560 aa27.09■■□□□ 1.93
MMP11-212ENST00000492464 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
MMP11-212ENST00000492464 SHROOM4Q9ULL8 1493 aa26.85■■□□□ 1.89
MMP11-212ENST00000492464 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
MMP11-212ENST00000492464 CECR2Q9BXF3 1484 aa26.19■■□□□ 1.78
MMP11-212ENST00000492464 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
MMP11-212ENST00000492464 SMARCA4P51532 1647 aa26.17■■□□□ 1.78
MMP11-212ENST00000492464 BAZ1AQ9NRL2 1556 aaPredicted RBP26.16■■□□□ 1.78
MMP11-212ENST00000492464 DNAJC5BQ9UF47 199 aa26.06■■□□□ 1.76
MMP11-212ENST00000492464 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
MMP11-212ENST00000492464 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
MMP11-212ENST00000492464 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
MMP11-212ENST00000492464 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
MMP11-212ENST00000492464 WIZO95785 1651 aa25.8■■□□□ 1.72
MMP11-212ENST00000492464 RSF1Q96T23 1441 aaPredicted RBP25.77■■□□□ 1.72
MMP11-212ENST00000492464 NCAPD3P42695 1498 aa25.76■■□□□ 1.71
MMP11-212ENST00000492464 HMGXB3Q12766 1538 aa25.75■■□□□ 1.71
MMP11-212ENST00000492464 BAZ1BQ9UIG0 1483 aaKnown RBP25.71■■□□□ 1.71
MMP11-212ENST00000492464 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
MMP11-212ENST00000492464 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
MMP11-212ENST00000492464 CCDC88BA6NC98 1476 aa25.16■■□□□ 1.62
MMP11-212ENST00000492464 LAMC3Q9Y6N6 1575 aa25.13■■□□□ 1.61
MMP11-212ENST00000492464 PRDM2Q13029 1718 aa25.09■■□□□ 1.61
MMP11-212ENST00000492464 NESP48681 1621 aa25.07■■□□□ 1.6
MMP11-212ENST00000492464 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
MMP11-212ENST00000492464 CFTRP13569 1480 aa24.96■■□□□ 1.59
MMP11-212ENST00000492464 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
MMP11-212ENST00000492464 ERCC6Q03468 1493 aa24.89■■□□□ 1.58
MMP11-212ENST00000492464 PDS5BQ9NTI5 1447 aa24.88■■□□□ 1.57
MMP11-212ENST00000492464 FANCD2Q9BXW9 1451 aa24.78■■□□□ 1.56
MMP11-212ENST00000492464 CEP164Q9UPV0 1460 aa24.76■■□□□ 1.55
MMP11-212ENST00000492464 THOC2Q8NI27 1593 aaKnown RBP24.71■■□□□ 1.55
MMP11-212ENST00000492464 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
MMP11-212ENST00000492464 WDR62O43379 1518 aa24.56■■□□□ 1.52
MMP11-212ENST00000492464 URB2Q14146 1524 aaKnown RBP24.51■■□□□ 1.51
MMP11-212ENST00000492464 CUX2O14529 1486 aa24.5■■□□□ 1.51
MMP11-212ENST00000492464 DNMBPQ6XZF7 1577 aa24.49■■□□□ 1.51
MMP11-212ENST00000492464 ABCC8Q09428 1581 aa24.47■■□□□ 1.51
MMP11-212ENST00000492464 TOPBP1Q92547 1522 aa24.45■■□□□ 1.5
MMP11-212ENST00000492464 CUX1P39880 1505 aa24.38■■□□□ 1.49
MMP11-212ENST00000492464 BIVM-ERCC5R4GMW8 1640 aa24.34■■□□□ 1.49
MMP11-212ENST00000492464 WRNQ14191 1432 aaPredicted RBP eCLIP24.32■■□□□ 1.48
MMP11-212ENST00000492464 TOP2BQ02880 1626 aa24.31■■□□□ 1.48
MMP11-212ENST00000492464 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
MMP11-212ENST00000492464 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
MMP11-212ENST00000492464 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
MMP11-212ENST00000492464 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
MMP11-212ENST00000492464 TARBP1Q13395 1621 aaKnown RBP24.18■■□□□ 1.46
MMP11-212ENST00000492464 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
MMP11-212ENST00000492464 SOGA1O94964 1423 aa24.12■■□□□ 1.45
MMP11-212ENST00000492464 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
MMP11-212ENST00000492464 EIF4G3O43432 1585 aaKnown RBP24.06■■□□□ 1.44
MMP11-212ENST00000492464 ZNF608Q9ULD9 1512 aaPredicted RBP24.03■■□□□ 1.44
MMP11-212ENST00000492464 ABCA10Q8WWZ4 1543 aa24.02■■□□□ 1.44
MMP11-212ENST00000492464 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
MMP11-212ENST00000492464 ABCA5Q8WWZ7 1642 aa23.96■■□□□ 1.43
MMP11-212ENST00000492464 TRIM41Q8WV44 630 aa23.95■■□□□ 1.42
MMP11-212ENST00000492464 AQRO60306 1485 aaKnown RBP eCLIP23.93■■□□□ 1.42
MMP11-212ENST00000492464 TDRD9Q8NDG6 1382 aaKnown RBP23.91■■□□□ 1.42
MMP11-212ENST00000492464 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
MMP11-212ENST00000492464 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
MMP11-212ENST00000492464 GRIN2BQ13224 1484 aa23.83■■□□□ 1.41
MMP11-212ENST00000492464 KIF27Q86VH2 1401 aa23.8■■□□□ 1.4
MMP11-212ENST00000492464 CHD1O14646 1710 aa23.77■■□□□ 1.4
MMP11-212ENST00000492464 ERICH3Q5RHP9 1530 aa23.77■■□□□ 1.4
MMP11-212ENST00000492464 SNAPC4Q5SXM2 1469 aa23.76■■□□□ 1.39
MMP11-212ENST00000492464 MAGI1Q96QZ7 1491 aaPredicted RBP23.75■■□□□ 1.39
MMP11-212ENST00000492464 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
MMP11-212ENST00000492464 CUL7Q14999 1698 aa23.7■■□□□ 1.39
MMP11-212ENST00000492464 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.38
MMP11-212ENST00000492464 SYNJ2O15056 1496 aa23.64■■□□□ 1.38
MMP11-212ENST00000492464 FHAD1B1AJZ9 1412 aa23.6■■□□□ 1.37
MMP11-212ENST00000492464 IGF1RP08069 1367 aa23.59■■□□□ 1.37
MMP11-212ENST00000492464 EEA1Q15075 1411 aa23.59■■□□□ 1.37
MMP11-212ENST00000492464 FBLN2P98095 1184 aa23.58■■□□□ 1.37
MMP11-212ENST00000492464 CHMP7Q8WUX9 453 aaPredicted RBP23.56■■□□□ 1.36
MMP11-212ENST00000492464 GRIN2AQ12879 1464 aa23.53■■□□□ 1.36
MMP11-212ENST00000492464 CARMIL1Q5VZK9 1371 aa23.5■■□□□ 1.35
MMP11-212ENST00000492464 OSCARQ8IYS5 282 aa23.46■■□□□ 1.35
MMP11-212ENST00000492464 FAM9AQ8IZU1 332 aaPredicted RBP23.44■■□□□ 1.34
MMP11-212ENST00000492464 CEP170Q5SW79 1584 aa23.43■■□□□ 1.34
MMP11-212ENST00000492464 RAPGEF2Q9Y4G8 1499 aa23.43■■□□□ 1.34
MMP11-212ENST00000492464 CSRNP3Q8WYN3 585 aa23.42■■□□□ 1.34
MMP11-212ENST00000492464 PRXQ9BXM0 1461 aa23.4■■□□□ 1.34
MMP11-212ENST00000492464 CLASP1Q7Z460 1538 aa23.39■■□□□ 1.34
MMP11-212ENST00000492464 CTTNBP2Q8WZ74 1663 aa23.38■■□□□ 1.33
MMP11-212ENST00000492464 KIF21BO75037 1637 aa23.38■■□□□ 1.33
MMP11-212ENST00000492464 DNAJC5Q9H3Z4 198 aa23.38■■□□□ 1.33
MMP11-212ENST00000492464 NUP160Q12769 1436 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms