RNA–Protein interactions for RNA: ENST00000492453.1

SNRPCP11-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 11, humanhuman

BASIC

Gene SNRPCP11, Length 205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP11-201ENST00000492453 NISCHQ9Y2I1 1504 aa17.5■□□□□ 0.39
SNRPCP11-201ENST00000492453 ABCC9O60706 1549 aa16.22■□□□□ 0.19
SNRPCP11-201ENST00000492453 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
SNRPCP11-201ENST00000492453 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
SNRPCP11-201ENST00000492453 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
SNRPCP11-201ENST00000492453 NACADO15069 1562 aa15.11■□□□□ 0.01
SNRPCP11-201ENST00000492453 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
SNRPCP11-201ENST00000492453 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
SNRPCP11-201ENST00000492453 DCAF8L2P0C7V8 631 aa14.89□□□□□ -0.03
SNRPCP11-201ENST00000492453 BICRAQ9NZM4 1560 aa14.87□□□□□ -0.03
SNRPCP11-201ENST00000492453 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
SNRPCP11-201ENST00000492453 SHROOM4Q9ULL8 1493 aa14.69□□□□□ -0.06
SNRPCP11-201ENST00000492453 CECR2Q9BXF3 1484 aa14.68□□□□□ -0.06
SNRPCP11-201ENST00000492453 DNAJC5Q9H3Z4 198 aa14.66□□□□□ -0.06
SNRPCP11-201ENST00000492453 CC2D2AQ9P2K1 1620 aa14.64□□□□□ -0.07
SNRPCP11-201ENST00000492453 EIF4G1Q04637 1599 aaKnown RBP14.52□□□□□ -0.08
SNRPCP11-201ENST00000492453 DCAF1Q9Y4B6 1507 aa14.47□□□□□ -0.09
SNRPCP11-201ENST00000492453 ZCCHC6Q5VYS8 1495 aaKnown RBP14.41□□□□□ -0.1
SNRPCP11-201ENST00000492453 SCRIBQ14160 1630 aa14.38□□□□□ -0.11
SNRPCP11-201ENST00000492453 CUX2O14529 1486 aa14.2□□□□□ -0.14
SNRPCP11-201ENST00000492453 ERCC6Q03468 1493 aa14.05□□□□□ -0.16
SNRPCP11-201ENST00000492453 NCAPD3P42695 1498 aa13.98□□□□□ -0.17
SNRPCP11-201ENST00000492453 ATAD2BQ9ULI0 1458 aa13.85□□□□□ -0.19
SNRPCP11-201ENST00000492453 NESP48681 1621 aa13.82□□□□□ -0.2
SNRPCP11-201ENST00000492453 HMGXB3Q12766 1538 aa13.82□□□□□ -0.2
SNRPCP11-201ENST00000492453 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
SNRPCP11-201ENST00000492453 THOC2Q8NI27 1593 aaKnown RBP13.78□□□□□ -0.2
SNRPCP11-201ENST00000492453 TRIM41Q8WV44 630 aa13.77□□□□□ -0.21
SNRPCP11-201ENST00000492453 SMARCA4P51532 1647 aa13.72□□□□□ -0.21
SNRPCP11-201ENST00000492453 LAMC3Q9Y6N6 1575 aa13.71□□□□□ -0.22
SNRPCP11-201ENST00000492453 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
SNRPCP11-201ENST00000492453 PDS5BQ9NTI5 1447 aa13.64□□□□□ -0.23
SNRPCP11-201ENST00000492453 PEG3Q9GZU2 1588 aa13.62□□□□□ -0.23
SNRPCP11-201ENST00000492453 KIF21AQ7Z4S6 1674 aa13.62□□□□□ -0.23
SNRPCP11-201ENST00000492453 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
SNRPCP11-201ENST00000492453 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
SNRPCP11-201ENST00000492453 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
SNRPCP11-201ENST00000492453 WDR62O43379 1518 aa13.51□□□□□ -0.25
SNRPCP11-201ENST00000492453 OSCARQ8IYS5 282 aa13.49□□□□□ -0.25
SNRPCP11-201ENST00000492453 MROH2BQ7Z745 1585 aa13.46□□□□□ -0.25
SNRPCP11-201ENST00000492453 CEP164Q9UPV0 1460 aa13.4□□□□□ -0.26
SNRPCP11-201ENST00000492453 FANCD2Q9BXW9 1451 aa13.35□□□□□ -0.27
SNRPCP11-201ENST00000492453 RIMBP3CA6NJZ7 1639 aa13.31□□□□□ -0.28
SNRPCP11-201ENST00000492453 RIMBP3BA6NNM3 1639 aa13.31□□□□□ -0.28
SNRPCP11-201ENST00000492453 RIMBP3Q9UFD9 1639 aa13.31□□□□□ -0.28
SNRPCP11-201ENST00000492453 CFTRP13569 1480 aa13.28□□□□□ -0.28
SNRPCP11-201ENST00000492453 WIZO95785 1651 aa13.25□□□□□ -0.29
SNRPCP11-201ENST00000492453 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
SNRPCP11-201ENST00000492453 ARHGEF11O15085 1522 aa13.24□□□□□ -0.29
SNRPCP11-201ENST00000492453 CYB5RLQ6IPT4 315 aa13.16□□□□□ -0.3
SNRPCP11-201ENST00000492453 IFT140Q96RY7 1462 aa13.16□□□□□ -0.3
SNRPCP11-201ENST00000492453 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
SNRPCP11-201ENST00000492453 TRHP20396 242 aaPredicted RBP13.14□□□□□ -0.31
SNRPCP11-201ENST00000492453 TOP2AP11388 1531 aaKnown RBP13.09□□□□□ -0.31
SNRPCP11-201ENST00000492453 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
SNRPCP11-201ENST00000492453 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
SNRPCP11-201ENST00000492453 PRDM2Q13029 1718 aa13.06□□□□□ -0.32
SNRPCP11-201ENST00000492453 AEBP2Q6ZN18 517 aaPredicted RBP13.06□□□□□ -0.32
SNRPCP11-201ENST00000492453 EIF4G3O43432 1585 aaKnown RBP13.05□□□□□ -0.32
SNRPCP11-201ENST00000492453 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
SNRPCP11-201ENST00000492453 ABCC8Q09428 1581 aa13.03□□□□□ -0.32
SNRPCP11-201ENST00000492453 CHD1O14646 1710 aa13.01□□□□□ -0.33
SNRPCP11-201ENST00000492453 AQRO60306 1485 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNRPCP11-201ENST00000492453 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
SNRPCP11-201ENST00000492453 DNMBPQ6XZF7 1577 aa12.96□□□□□ -0.33
SNRPCP11-201ENST00000492453 FBLN2P98095 1184 aa12.96□□□□□ -0.33
SNRPCP11-201ENST00000492453 CCDC88BA6NC98 1476 aa12.94□□□□□ -0.34
SNRPCP11-201ENST00000492453 CLASP1Q7Z460 1538 aa12.89□□□□□ -0.35
SNRPCP11-201ENST00000492453 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
SNRPCP11-201ENST00000492453 SYNJ1O43426 1573 aa12.85□□□□□ -0.35
SNRPCP11-201ENST00000492453 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
SNRPCP11-201ENST00000492453 SNAPC4Q5SXM2 1469 aa12.84□□□□□ -0.35
SNRPCP11-201ENST00000492453 WDR97A6NE52 1622 aa12.84□□□□□ -0.35
SNRPCP11-201ENST00000492453 SOGA1O94964 1423 aa12.83□□□□□ -0.36
SNRPCP11-201ENST00000492453 CHMP7Q8WUX9 453 aaPredicted RBP12.83□□□□□ -0.36
SNRPCP11-201ENST00000492453 RAD54L2Q9Y4B4 1467 aa12.83□□□□□ -0.36
SNRPCP11-201ENST00000492453 MAGI1Q96QZ7 1491 aaPredicted RBP12.82□□□□□ -0.36
SNRPCP11-201ENST00000492453 GAPVD1Q14C86 1478 aa12.78□□□□□ -0.36
SNRPCP11-201ENST00000492453 SYNJ2O15056 1496 aa12.78□□□□□ -0.36
SNRPCP11-201ENST00000492453 GRIN2BQ13224 1484 aa12.77□□□□□ -0.37
SNRPCP11-201ENST00000492453 FGD5Q6ZNL6 1462 aa12.74□□□□□ -0.37
SNRPCP11-201ENST00000492453 CUX1P39880 1505 aa12.67□□□□□ -0.38
SNRPCP11-201ENST00000492453 PBRM1Q86U86 1689 aa12.64□□□□□ -0.39
SNRPCP11-201ENST00000492453 ERCC6L2Q5T890 1561 aa12.63□□□□□ -0.39
SNRPCP11-201ENST00000492453 ABCA10Q8WWZ4 1543 aa12.6□□□□□ -0.39
SNRPCP11-201ENST00000492453 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
SNRPCP11-201ENST00000492453 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
SNRPCP11-201ENST00000492453 ABCA5Q8WWZ7 1642 aa12.59□□□□□ -0.39
SNRPCP11-201ENST00000492453 KIF13AQ9H1H9 1805 aa12.58□□□□□ -0.4
SNRPCP11-201ENST00000492453 NUP160Q12769 1436 aa12.58□□□□□ -0.4
SNRPCP11-201ENST00000492453 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
SNRPCP11-201ENST00000492453 ILDR1Q86SU0 546 aaPredicted RBP12.53□□□□□ -0.4
SNRPCP11-201ENST00000492453 ADAMTS12P58397 1594 aa12.52□□□□□ -0.4
SNRPCP11-201ENST00000492453 KDM4FA0A1W2PPD8 638 aa12.52□□□□□ -0.41
SNRPCP11-201ENST00000492453 ABCC10Q5T3U5 1492 aa12.51□□□□□ -0.41
SNRPCP11-201ENST00000492453 FAM69CQ0P6D2 419 aa12.5□□□□□ -0.41
SNRPCP11-201ENST00000492453 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
SNRPCP11-201ENST00000492453 PRG4Q92954 1404 aaPredicted RBP12.48□□□□□ -0.41
SNRPCP11-201ENST00000492453 WRNQ14191 1432 aaPredicted RBP eCLIP12.47□□□□□ -0.41
SNRPCP11-201ENST00000492453 MAPKBP1O60336 1514 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms