RNA–Protein interactions for RNA: ENST00000492448.1

EMD-208, Transcript of emerin, humanhuman

TSL 2

Gene EMD, Length 832 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-208ENST00000492448 NISCHQ9Y2I1 1504 aa39.84■■■■□ 3.97
EMD-208ENST00000492448 CCDC180Q9P1Z9 1646 aa34.84■■■■□ 3.17
EMD-208ENST00000492448 ZCCHC6Q5VYS8 1495 aaKnown RBP33.44■■■□□ 2.94
EMD-208ENST00000492448 ABCC9O60706 1549 aa33.03■■■□□ 2.88
EMD-208ENST00000492448 DCAF1Q9Y4B6 1507 aa32.94■■■□□ 2.86
EMD-208ENST00000492448 DCAF8L2P0C7V8 631 aa32.91■■■□□ 2.86
EMD-208ENST00000492448 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
EMD-208ENST00000492448 NACADO15069 1562 aa32.45■■■□□ 2.79
EMD-208ENST00000492448 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
EMD-208ENST00000492448 RB1CC1Q8TDY2 1594 aa32.21■■■□□ 2.75
EMD-208ENST00000492448 SCRIBQ14160 1630 aa32.01■■■□□ 2.72
EMD-208ENST00000492448 UNC13AQ9UPW8 1703 aa31.59■■■□□ 2.65
EMD-208ENST00000492448 BICRAQ9NZM4 1560 aa31.24■■■□□ 2.59
EMD-208ENST00000492448 PABPN1Q86U42 306 aaKnown RBP eCLIP31.11■■■□□ 2.571e-18■■■■■ 37.4
EMD-208ENST00000492448 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
EMD-208ENST00000492448 CECR2Q9BXF3 1484 aa30.96■■■□□ 2.55
EMD-208ENST00000492448 RSF1Q96T23 1441 aaPredicted RBP30.85■■■□□ 2.53
EMD-208ENST00000492448 MROH2BQ7Z745 1585 aa30.78■■■□□ 2.52
EMD-208ENST00000492448 BAZ1AQ9NRL2 1556 aaPredicted RBP30.78■■■□□ 2.52
EMD-208ENST00000492448 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
EMD-208ENST00000492448 DNAJC5BQ9UF47 199 aa30.54■■■□□ 2.48
EMD-208ENST00000492448 WIZO95785 1651 aa30.54■■■□□ 2.48
EMD-208ENST00000492448 EIF4G1Q04637 1599 aaKnown RBP30.3■■■□□ 2.44
EMD-208ENST00000492448 PEG3Q9GZU2 1588 aa30.28■■■□□ 2.44
EMD-208ENST00000492448 TOP2AP11388 1531 aaKnown RBP30.22■■■□□ 2.43
EMD-208ENST00000492448 ATAD2BQ9ULI0 1458 aa30.18■■■□□ 2.42
EMD-208ENST00000492448 SMARCA2P51531 1590 aa30.17■■■□□ 2.42
EMD-208ENST00000492448 BAZ1BQ9UIG0 1483 aaKnown RBP30.01■■■□□ 2.4
EMD-208ENST00000492448 NCAPD3P42695 1498 aa29.93■■■□□ 2.38
EMD-208ENST00000492448 HMGXB3Q12766 1538 aa29.9■■■□□ 2.38
EMD-208ENST00000492448 CC2D2AQ9P2K1 1620 aa29.89■■■□□ 2.38
EMD-208ENST00000492448 CCDC88BA6NC98 1476 aa29.89■■■□□ 2.38
EMD-208ENST00000492448 CHIC1Q5VXU3 224 aa29.71■■■□□ 2.35
EMD-208ENST00000492448 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
EMD-208ENST00000492448 CFTRP13569 1480 aa29.23■■■□□ 2.27
EMD-208ENST00000492448 ABCC8Q09428 1581 aa29.23■■■□□ 2.27
EMD-208ENST00000492448 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
EMD-208ENST00000492448 PRDM2Q13029 1718 aa29.14■■■□□ 2.26
EMD-208ENST00000492448 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
EMD-208ENST00000492448 NESP48681 1621 aa28.96■■■□□ 2.23
EMD-208ENST00000492448 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
EMD-208ENST00000492448 LAMC3Q9Y6N6 1575 aa28.95■■■□□ 2.22
EMD-208ENST00000492448 FANCD2Q9BXW9 1451 aa28.85■■■□□ 2.21
EMD-208ENST00000492448 TOP2BQ02880 1626 aa28.84■■■□□ 2.21
EMD-208ENST00000492448 BIVM-ERCC5R4GMW8 1640 aa28.83■■■□□ 2.21
EMD-208ENST00000492448 CUX1P39880 1505 aa28.8■■■□□ 2.2
EMD-208ENST00000492448 PDS5BQ9NTI5 1447 aa28.72■■■□□ 2.19
EMD-208ENST00000492448 FAM9AQ8IZU1 332 aaPredicted RBP28.72■■■□□ 2.19
EMD-208ENST00000492448 CEP164Q9UPV0 1460 aa28.68■■■□□ 2.18
EMD-208ENST00000492448 SOGA1O94964 1423 aa28.64■■■□□ 2.18
EMD-208ENST00000492448 KIF21AQ7Z4S6 1674 aa28.64■■■□□ 2.17
EMD-208ENST00000492448 DNMBPQ6XZF7 1577 aa28.58■■■□□ 2.17
EMD-208ENST00000492448 LOC105371045A0A1W2PR82 267 aa28.57■■■□□ 2.16
EMD-208ENST00000492448 EEA1Q15075 1411 aa28.56■■■□□ 2.16
EMD-208ENST00000492448 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
EMD-208ENST00000492448 TOPBP1Q92547 1522 aa28.53■■■□□ 2.16
EMD-208ENST00000492448 URB2Q14146 1524 aaKnown RBP28.51■■■□□ 2.15
EMD-208ENST00000492448 FGD5Q6ZNL6 1462 aa28.5■■■□□ 2.15
EMD-208ENST00000492448 DNAJC5Q9H3Z4 198 aa28.42■■■□□ 2.14
EMD-208ENST00000492448 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
EMD-208ENST00000492448 MRC2Q9UBG0 1479 aa28.39■■■□□ 2.13
EMD-208ENST00000492448 POLA1P09884 1462 aaPredicted RBP28.37■■■□□ 2.13
EMD-208ENST00000492448 ERCC6Q03468 1493 aa28.34■■■□□ 2.13
EMD-208ENST00000492448 EHMT2Q96KQ7 1210 aa28.32■■■□□ 2.12
EMD-208ENST00000492448 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
EMD-208ENST00000492448 CUX2O14529 1486 aa28.29■■■□□ 2.12
EMD-208ENST00000492448 RAD54L2Q9Y4B4 1467 aa28.29■■■□□ 2.12
EMD-208ENST00000492448 WDR62O43379 1518 aa28.23■■■□□ 2.11
EMD-208ENST00000492448 ABCA10Q8WWZ4 1543 aa28.23■■■□□ 2.11
EMD-208ENST00000492448 KIF21BO75037 1637 aa28.22■■■□□ 2.11
EMD-208ENST00000492448 WDR97A6NE52 1622 aa28.19■■■□□ 2.1
EMD-208ENST00000492448 THOC2Q8NI27 1593 aaKnown RBP28.19■■■□□ 2.1
EMD-208ENST00000492448 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
EMD-208ENST00000492448 TARBP1Q13395 1621 aaKnown RBP28.12■■■□□ 2.09
EMD-208ENST00000492448 PRXQ9BXM0 1461 aa28.1■■■□□ 2.09
EMD-208ENST00000492448 IGF1RP08069 1367 aa28.08■■■□□ 2.09
EMD-208ENST00000492448 RAPGEF2Q9Y4G8 1499 aa28.07■■■□□ 2.08
EMD-208ENST00000492448 ERICH3Q5RHP9 1530 aa28.05■■■□□ 2.08
EMD-208ENST00000492448 TNIKQ9UKE5 1360 aa28.05■■■□□ 2.08
EMD-208ENST00000492448 ABCA5Q8WWZ7 1642 aa28.04■■■□□ 2.08
EMD-208ENST00000492448 UBTFP17480 764 aaKnown RBP28.04■■■□□ 2.08
EMD-208ENST00000492448 TDRD9Q8NDG6 1382 aaKnown RBP28.01■■■□□ 2.07
EMD-208ENST00000492448 IFT140Q96RY7 1462 aa28.01■■■□□ 2.07
EMD-208ENST00000492448 GAPVD1Q14C86 1478 aa27.96■■■□□ 2.07
EMD-208ENST00000492448 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
EMD-208ENST00000492448 CUL7Q14999 1698 aa27.91■■■□□ 2.06
EMD-208ENST00000492448 CEP162Q5TB80 1403 aa27.9■■■□□ 2.06
EMD-208ENST00000492448 PBRM1Q86U86 1689 aa27.86■■■□□ 2.05
EMD-208ENST00000492448 ZNF608Q9ULD9 1512 aaPredicted RBP27.86■■■□□ 2.05
EMD-208ENST00000492448 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.051e-22■■■■■ 43.7
EMD-208ENST00000492448 EIF4G3O43432 1585 aaKnown RBP27.77■■■□□ 2.04
EMD-208ENST00000492448 GRIN2BQ13224 1484 aa27.77■■■□□ 2.04
EMD-208ENST00000492448 CLIP1P30622 1438 aa27.71■■■□□ 2.03
EMD-208ENST00000492448 ADAMTS12P58397 1594 aa27.69■■■□□ 2.02
EMD-208ENST00000492448 FHAD1B1AJZ9 1412 aa27.67■■■□□ 2.02
EMD-208ENST00000492448 RANGAP1P46060 587 aaPredicted RBP27.62■■■□□ 2.01
EMD-208ENST00000492448 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
EMD-208ENST00000492448 CTTNBP2Q8WZ74 1663 aa27.59■■■□□ 2.01
EMD-208ENST00000492448 MAGI1Q96QZ7 1491 aaPredicted RBP27.55■■■□□ 2
EMD-208ENST00000492448 ARAP1Q96P48 1450 aa27.47■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms