RNA–Protein interactions for RNA: ENST00000492418.1

TMC1-205, Transcript of transmembrane channel like 1, humanhuman

TSL 3

Gene TMC1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-205ENST00000492418 NISCHQ9Y2I1 1504 aa26.7■■□□□ 1.86
TMC1-205ENST00000492418 CCDC180Q9P1Z9 1646 aa23.68■■□□□ 1.38
TMC1-205ENST00000492418 ABCC9O60706 1549 aa23.18■■□□□ 1.3
TMC1-205ENST00000492418 DCAF8L2P0C7V8 631 aa22.51■■□□□ 1.19
TMC1-205ENST00000492418 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
TMC1-205ENST00000492418 NACADO15069 1562 aa22.29■■□□□ 1.16
TMC1-205ENST00000492418 ZCCHC6Q5VYS8 1495 aaKnown RBP22.21■■□□□ 1.15
TMC1-205ENST00000492418 MYO15BQ96JP2 1530 aa22.14■■□□□ 1.13
TMC1-205ENST00000492418 DCAF1Q9Y4B6 1507 aa22.06■■□□□ 1.12
TMC1-205ENST00000492418 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
TMC1-205ENST00000492418 UNC13AQ9UPW8 1703 aa21.69■■□□□ 1.06
TMC1-205ENST00000492418 SCRIBQ14160 1630 aa21.64■■□□□ 1.05
TMC1-205ENST00000492418 BICRAQ9NZM4 1560 aa21.53■■□□□ 1.04
TMC1-205ENST00000492418 SHROOM4Q9ULL8 1493 aa21.39■■□□□ 1.01
TMC1-205ENST00000492418 DNAJC5BQ9UF47 199 aa21.17■□□□□ 0.98
TMC1-205ENST00000492418 EIF4G1Q04637 1599 aaKnown RBP21.02■□□□□ 0.96
TMC1-205ENST00000492418 CC2D2AQ9P2K1 1620 aa20.93■□□□□ 0.94
TMC1-205ENST00000492418 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
TMC1-205ENST00000492418 BAZ1AQ9NRL2 1556 aaPredicted RBP20.72■□□□□ 0.91
TMC1-205ENST00000492418 SMARCA4P51532 1647 aa20.68■□□□□ 0.9
TMC1-205ENST00000492418 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
TMC1-205ENST00000492418 ATAD2BQ9ULI0 1458 aa20.57■□□□□ 0.88
TMC1-205ENST00000492418 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
TMC1-205ENST00000492418 MROH2BQ7Z745 1585 aa20.55■□□□□ 0.88
TMC1-205ENST00000492418 BAZ1BQ9UIG0 1483 aaKnown RBP20.46■□□□□ 0.87
TMC1-205ENST00000492418 PEG3Q9GZU2 1588 aa20.45■□□□□ 0.86
TMC1-205ENST00000492418 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
TMC1-205ENST00000492418 RSF1Q96T23 1441 aaPredicted RBP20.36■□□□□ 0.85
TMC1-205ENST00000492418 WIZO95785 1651 aa20.34■□□□□ 0.85
TMC1-205ENST00000492418 TOP2AP11388 1531 aaKnown RBP20.14■□□□□ 0.81
TMC1-205ENST00000492418 SUPT5HO00267 1087 aaKnown RBP20.06■□□□□ 0.8
TMC1-205ENST00000492418 ERCC6Q03468 1493 aa20.05■□□□□ 0.8
TMC1-205ENST00000492418 NESP48681 1621 aa20.02■□□□□ 0.8
TMC1-205ENST00000492418 LAMC3Q9Y6N6 1575 aa20.02■□□□□ 0.8
TMC1-205ENST00000492418 CADPSQ9ULU8 1353 aa20.01■□□□□ 0.79
TMC1-205ENST00000492418 PDS5BQ9NTI5 1447 aa19.95■□□□□ 0.78
TMC1-205ENST00000492418 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
TMC1-205ENST00000492418 CFTRP13569 1480 aa19.86■□□□□ 0.77
TMC1-205ENST00000492418 KIF21AQ7Z4S6 1674 aa19.78■□□□□ 0.76
TMC1-205ENST00000492418 FANCD2Q9BXW9 1451 aa19.77■□□□□ 0.76
TMC1-205ENST00000492418 CEP164Q9UPV0 1460 aa19.75■□□□□ 0.75
TMC1-205ENST00000492418 CUX2O14529 1486 aa19.73■□□□□ 0.75
TMC1-205ENST00000492418 MRC2Q9UBG0 1479 aa19.69■□□□□ 0.74
TMC1-205ENST00000492418 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
TMC1-205ENST00000492418 THOC2Q8NI27 1593 aaKnown RBP19.66■□□□□ 0.74
TMC1-205ENST00000492418 WDR62O43379 1518 aa19.57■□□□□ 0.72
TMC1-205ENST00000492418 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
TMC1-205ENST00000492418 URB2Q14146 1524 aaKnown RBP19.51■□□□□ 0.71
TMC1-205ENST00000492418 TOPBP1Q92547 1522 aa19.43■□□□□ 0.7
TMC1-205ENST00000492418 DNMBPQ6XZF7 1577 aa19.41■□□□□ 0.7
TMC1-205ENST00000492418 IFT140Q96RY7 1462 aa19.33■□□□□ 0.68
TMC1-205ENST00000492418 CUX1P39880 1505 aa19.28■□□□□ 0.68
TMC1-205ENST00000492418 SOGA1O94964 1423 aa19.26■□□□□ 0.67
TMC1-205ENST00000492418 POLA1P09884 1462 aaPredicted RBP19.26■□□□□ 0.67
TMC1-205ENST00000492418 WRNQ14191 1432 aaPredicted RBP eCLIP19.25■□□□□ 0.67
TMC1-205ENST00000492418 FGD5Q6ZNL6 1462 aa19.24■□□□□ 0.67
TMC1-205ENST00000492418 RAD54L2Q9Y4B4 1467 aa19.19■□□□□ 0.66
TMC1-205ENST00000492418 ZNF608Q9ULD9 1512 aaPredicted RBP19.18■□□□□ 0.66
TMC1-205ENST00000492418 TARBP1Q13395 1621 aaKnown RBP19.17■□□□□ 0.66
TMC1-205ENST00000492418 TOP2BQ02880 1626 aa19.14■□□□□ 0.66
TMC1-205ENST00000492418 TDRD9Q8NDG6 1382 aaKnown RBP19.13■□□□□ 0.65
TMC1-205ENST00000492418 AQRO60306 1485 aaKnown RBP eCLIP19.13■□□□□ 0.65
TMC1-205ENST00000492418 SYNJ1O43426 1573 aa19.12■□□□□ 0.65
TMC1-205ENST00000492418 BIVM-ERCC5R4GMW8 1640 aa19.11■□□□□ 0.65
TMC1-205ENST00000492418 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
TMC1-205ENST00000492418 EIF4G3O43432 1585 aaKnown RBP19.1■□□□□ 0.65
TMC1-205ENST00000492418 WDR97A6NE52 1622 aa19.06■□□□□ 0.64
TMC1-205ENST00000492418 ABCA10Q8WWZ4 1543 aa19.05■□□□□ 0.64
TMC1-205ENST00000492418 OSCARQ8IYS5 282 aa19.04■□□□□ 0.64
TMC1-205ENST00000492418 FBLN2P98095 1184 aa19.03■□□□□ 0.64
TMC1-205ENST00000492418 GAPVD1Q14C86 1478 aa19.02■□□□□ 0.63
TMC1-205ENST00000492418 GRIN2BQ13224 1484 aa19■□□□□ 0.63
TMC1-205ENST00000492418 CHMP7Q8WUX9 453 aaPredicted RBP18.97■□□□□ 0.63
TMC1-205ENST00000492418 TRIM41Q8WV44 630 aa18.97■□□□□ 0.63
TMC1-205ENST00000492418 SNAPC4Q5SXM2 1469 aa18.93■□□□□ 0.62
TMC1-205ENST00000492418 MAGI1Q96QZ7 1491 aaPredicted RBP18.93■□□□□ 0.62
TMC1-205ENST00000492418 ABCA5Q8WWZ7 1642 aa18.92■□□□□ 0.62
TMC1-205ENST00000492418 PBRM1Q86U86 1689 aa18.9■□□□□ 0.62
TMC1-205ENST00000492418 KIF27Q86VH2 1401 aa18.89■□□□□ 0.61
TMC1-205ENST00000492418 SYNJ2O15056 1496 aa18.86■□□□□ 0.61
TMC1-205ENST00000492418 CHD1O14646 1710 aa18.85■□□□□ 0.61
TMC1-205ENST00000492418 ERICH3Q5RHP9 1530 aa18.84■□□□□ 0.61
TMC1-205ENST00000492418 FHAD1B1AJZ9 1412 aa18.8■□□□□ 0.6
TMC1-205ENST00000492418 IGF1RP08069 1367 aa18.75■□□□□ 0.59
TMC1-205ENST00000492418 ADAMTS12P58397 1594 aa18.75■□□□□ 0.59
TMC1-205ENST00000492418 GRIN2AQ12879 1464 aa18.73■□□□□ 0.59
TMC1-205ENST00000492418 CHIC1Q5VXU3 224 aa18.68■□□□□ 0.58
TMC1-205ENST00000492418 CUL7Q14999 1698 aa18.68■□□□□ 0.58
TMC1-205ENST00000492418 CARMIL1Q5VZK9 1371 aa18.68■□□□□ 0.58
TMC1-205ENST00000492418 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
TMC1-205ENST00000492418 CLASP1Q7Z460 1538 aa18.63■□□□□ 0.57
TMC1-205ENST00000492418 NUP160Q12769 1436 aa18.61■□□□□ 0.57
TMC1-205ENST00000492418 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
TMC1-205ENST00000492418 CEP170Q5SW79 1584 aa18.59■□□□□ 0.57
TMC1-205ENST00000492418 RIMBP3CA6NJZ7 1639 aa18.58■□□□□ 0.56
TMC1-205ENST00000492418 RIMBP3BA6NNM3 1639 aa18.58■□□□□ 0.56
TMC1-205ENST00000492418 RIMBP3Q9UFD9 1639 aa18.58■□□□□ 0.56
TMC1-205ENST00000492418 CSRNP3Q8WYN3 585 aa18.57■□□□□ 0.56
TMC1-205ENST00000492418 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
TMC1-205ENST00000492418 RAPGEF2Q9Y4G8 1499 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms