RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 AEBP2Q6ZN18 517 aaPredicted RBP22.69■■□□□ 1.22
RP9-204ENST00000492391 CHIC1Q5VXU3 224 aa21.44■■□□□ 1.02
RP9-204ENST00000492391 NISCHQ9Y2I1 1504 aa20.96■□□□□ 0.95
RP9-204ENST00000492391 SENP3Q9H4L4 574 aaPredicted RBP19.5■□□□□ 0.71
RP9-204ENST00000492391 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
RP9-204ENST00000492391 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
RP9-204ENST00000492391 ABCC9O60706 1549 aa18.15■□□□□ 0.5
RP9-204ENST00000492391 FOXD1Q16676 465 aa18.13■□□□□ 0.49
RP9-204ENST00000492391 ZCCHC6Q5VYS8 1495 aaKnown RBP17.46■□□□□ 0.39
RP9-204ENST00000492391 NACADO15069 1562 aa17.43■□□□□ 0.38
RP9-204ENST00000492391 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
RP9-204ENST00000492391 DCAF8L2P0C7V8 631 aa17.37■□□□□ 0.37
RP9-204ENST00000492391 MYO15BQ96JP2 1530 aa17.35■□□□□ 0.37
RP9-204ENST00000492391 DCAF1Q9Y4B6 1507 aa17.31■□□□□ 0.36
RP9-204ENST00000492391 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
RP9-204ENST00000492391 MSH5O43196 834 aa17.12■□□□□ 0.33
RP9-204ENST00000492391 PLPPR3Q6T4P5 718 aa17.11■□□□□ 0.33
RP9-204ENST00000492391 BICRAQ9NZM4 1560 aa17.07■□□□□ 0.32
RP9-204ENST00000492391 PABPN1Q86U42 306 aaKnown RBP eCLIP16.98■□□□□ 0.31
RP9-204ENST00000492391 SCRIBQ14160 1630 aa16.97■□□□□ 0.31
RP9-204ENST00000492391 PIAS4Q8N2W9 510 aaPredicted RBP16.97■□□□□ 0.31
RP9-204ENST00000492391 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
RP9-204ENST00000492391 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
RP9-204ENST00000492391 PPP6R1Q9UPN7 881 aa16.76■□□□□ 0.27
RP9-204ENST00000492391 ADRA2BP18089 450 aa16.74■□□□□ 0.27
RP9-204ENST00000492391 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
RP9-204ENST00000492391 EIF4G1Q04637 1599 aaKnown RBP16.51■□□□□ 0.23
RP9-204ENST00000492391 CC2D2AQ9P2K1 1620 aa16.45■□□□□ 0.22
RP9-204ENST00000492391 CECR2Q9BXF3 1484 aa16.4■□□□□ 0.22
RP9-204ENST00000492391 SMARCA4P51532 1647 aa16.26■□□□□ 0.19
RP9-204ENST00000492391 MROH2BQ7Z745 1585 aa16.21■□□□□ 0.18
RP9-204ENST00000492391 BAZ1AQ9NRL2 1556 aaPredicted RBP16.17■□□□□ 0.18
RP9-204ENST00000492391 ATAD2BQ9ULI0 1458 aa16.15■□□□□ 0.18
RP9-204ENST00000492391 NCAPD3P42695 1498 aa16.12■□□□□ 0.17
RP9-204ENST00000492391 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
RP9-204ENST00000492391 WIZO95785 1651 aa16.05■□□□□ 0.16
RP9-204ENST00000492391 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
RP9-204ENST00000492391 HMGXB3Q12766 1538 aa16.01■□□□□ 0.15
RP9-204ENST00000492391 RSF1Q96T23 1441 aaPredicted RBP16.01■□□□□ 0.15
RP9-204ENST00000492391 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
RP9-204ENST00000492391 NESP48681 1621 aa15.79■□□□□ 0.12
RP9-204ENST00000492391 TOP2AP11388 1531 aaKnown RBP15.78■□□□□ 0.12
RP9-204ENST00000492391 CCDC88BA6NC98 1476 aa15.65■□□□□ 0.1
RP9-204ENST00000492391 LAMC3Q9Y6N6 1575 aa15.64■□□□□ 0.09
RP9-204ENST00000492391 CADPSQ9ULU8 1353 aa15.62■□□□□ 0.09
RP9-204ENST00000492391 KIF21AQ7Z4S6 1674 aa15.61■□□□□ 0.09
RP9-204ENST00000492391 CFTRP13569 1480 aa15.57■□□□□ 0.08
RP9-204ENST00000492391 SUPT5HO00267 1087 aaKnown RBP15.54■□□□□ 0.08
RP9-204ENST00000492391 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
RP9-204ENST00000492391 ERCC6Q03468 1493 aa15.51■□□□□ 0.07
RP9-204ENST00000492391 PRDM2Q13029 1718 aa15.51■□□□□ 0.07
RP9-204ENST00000492391 PDS5BQ9NTI5 1447 aa15.47■□□□□ 0.07
RP9-204ENST00000492391 FANCD2Q9BXW9 1451 aa15.44■□□□□ 0.06
RP9-204ENST00000492391 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
RP9-204ENST00000492391 MAPK8IP2Q13387 824 aaPredicted RBP15.4■□□□□ 0.06
RP9-204ENST00000492391 DMRT2Q9Y5R5 561 aa15.4■□□□□ 0.06
RP9-204ENST00000492391 CUX2O14529 1486 aa15.37■□□□□ 0.05
RP9-204ENST00000492391 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
RP9-204ENST00000492391 MRC2Q9UBG0 1479 aa15.36■□□□□ 0.05
RP9-204ENST00000492391 WDR62O43379 1518 aa15.36■□□□□ 0.05
RP9-204ENST00000492391 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
RP9-204ENST00000492391 KCNA4P22459 653 aa15.28■□□□□ 0.04
RP9-204ENST00000492391 TOPBP1Q92547 1522 aa15.23■□□□□ 0.03
RP9-204ENST00000492391 DNMBPQ6XZF7 1577 aa15.19■□□□□ 0.02
RP9-204ENST00000492391 CUX1P39880 1505 aa15.18■□□□□ 0.02
RP9-204ENST00000492391 EHMT2Q96KQ7 1210 aa15.15■□□□□ 0.02
RP9-204ENST00000492391 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
RP9-204ENST00000492391 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
RP9-204ENST00000492391 POLA1P09884 1462 aaPredicted RBP15.11■□□□□ 0.01
RP9-204ENST00000492391 ZNF608Q9ULD9 1512 aaPredicted RBP15.11■□□□□ 0.01
RP9-204ENST00000492391 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
RP9-204ENST00000492391 SYNJ1O43426 1573 aa15.07■□□□□ 0
RP9-204ENST00000492391 FGD5Q6ZNL6 1462 aa15.07■□□□□ 0
RP9-204ENST00000492391 IFT140Q96RY7 1462 aa15.05■□□□□ -0
RP9-204ENST00000492391 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
RP9-204ENST00000492391 TOP2BQ02880 1626 aa15.03■□□□□ -0
RP9-204ENST00000492391 WDR97A6NE52 1622 aa15.02□□□□□ -0.01
RP9-204ENST00000492391 SOGA1O94964 1423 aa15□□□□□ -0.01
RP9-204ENST00000492391 EIF4G3O43432 1585 aaKnown RBP15□□□□□ -0.01
RP9-204ENST00000492391 AQRO60306 1485 aaKnown RBP eCLIP15□□□□□ -0.012e-6■■■■□ 21
RP9-204ENST00000492391 WRNQ14191 1432 aaPredicted RBP eCLIP15□□□□□ -0.01
RP9-204ENST00000492391 TDRD9Q8NDG6 1382 aaKnown RBP14.96□□□□□ -0.02
RP9-204ENST00000492391 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
RP9-204ENST00000492391 PPP4R3CPQ6ZMV5 832 aa14.93□□□□□ -0.02
RP9-204ENST00000492391 ABCA10Q8WWZ4 1543 aa14.92□□□□□ -0.02
RP9-204ENST00000492391 ABCA5Q8WWZ7 1642 aa14.9□□□□□ -0.02
RP9-204ENST00000492391 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
RP9-204ENST00000492391 PBRM1Q86U86 1689 aa14.86□□□□□ -0.03
RP9-204ENST00000492391 CHD1O14646 1710 aa14.86□□□□□ -0.03
RP9-204ENST00000492391 GAPVD1Q14C86 1478 aa14.82□□□□□ -0.04
RP9-204ENST00000492391 GRIN2BQ13224 1484 aa14.8□□□□□ -0.04
RP9-204ENST00000492391 SNAPC4Q5SXM2 1469 aa14.8□□□□□ -0.04
RP9-204ENST00000492391 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
RP9-204ENST00000492391 MAGI1Q96QZ7 1491 aaPredicted RBP14.75□□□□□ -0.05
RP9-204ENST00000492391 HOXD11P31277 338 aaPredicted RBP14.74□□□□□ -0.05
RP9-204ENST00000492391 OSCARQ8IYS5 282 aa14.74□□□□□ -0.05
RP9-204ENST00000492391 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
RP9-204ENST00000492391 SLC4A1APQ9BWU0 796 aaKnown RBP14.73□□□□□ -0.05
RP9-204ENST00000492391 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
RP9-204ENST00000492391 SYNJ2O15056 1496 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms