RNA–Protein interactions for RNA: ENST00000492331.1

MCF2L2-213, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 661 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-213ENST00000492331 NISCHQ9Y2I1 1504 aa23.75■■□□□ 1.39
MCF2L2-213ENST00000492331 CCDC180Q9P1Z9 1646 aa21.18■□□□□ 0.98
MCF2L2-213ENST00000492331 ABCC9O60706 1549 aa21.01■□□□□ 0.95
MCF2L2-213ENST00000492331 DCAF8L2P0C7V8 631 aa20.12■□□□□ 0.81
MCF2L2-213ENST00000492331 RB1CC1Q8TDY2 1594 aa20.08■□□□□ 0.8
MCF2L2-213ENST00000492331 NACADO15069 1562 aa19.98■□□□□ 0.79
MCF2L2-213ENST00000492331 MYO15BQ96JP2 1530 aa19.72■□□□□ 0.75
MCF2L2-213ENST00000492331 ZCCHC6Q5VYS8 1495 aaKnown RBP19.72■□□□□ 0.75
MCF2L2-213ENST00000492331 PABPN1Q86U42 306 aaKnown RBP eCLIP19.63■□□□□ 0.73
MCF2L2-213ENST00000492331 UNC13AQ9UPW8 1703 aa19.6■□□□□ 0.73
MCF2L2-213ENST00000492331 DCAF1Q9Y4B6 1507 aa19.59■□□□□ 0.73
MCF2L2-213ENST00000492331 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
MCF2L2-213ENST00000492331 BICRAQ9NZM4 1560 aa19.44■□□□□ 0.7
MCF2L2-213ENST00000492331 SCRIBQ14160 1630 aa19.38■□□□□ 0.69
MCF2L2-213ENST00000492331 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
MCF2L2-213ENST00000492331 EIF4G1Q04637 1599 aaKnown RBP18.97■□□□□ 0.63
MCF2L2-213ENST00000492331 CC2D2AQ9P2K1 1620 aa18.96■□□□□ 0.63
MCF2L2-213ENST00000492331 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
MCF2L2-213ENST00000492331 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
MCF2L2-213ENST00000492331 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
MCF2L2-213ENST00000492331 NCAPD3P42695 1498 aa18.43■□□□□ 0.54
MCF2L2-213ENST00000492331 ATAD2BQ9ULI0 1458 aa18.43■□□□□ 0.54
MCF2L2-213ENST00000492331 SMARCA2P51531 1590 aa18.4■□□□□ 0.54
MCF2L2-213ENST00000492331 MROH2BQ7Z745 1585 aa18.32■□□□□ 0.52
MCF2L2-213ENST00000492331 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
MCF2L2-213ENST00000492331 BAZ1BQ9UIG0 1483 aaKnown RBP18.3■□□□□ 0.52
MCF2L2-213ENST00000492331 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
MCF2L2-213ENST00000492331 ERCC6Q03468 1493 aa18.14■□□□□ 0.49
MCF2L2-213ENST00000492331 WIZO95785 1651 aa18.13■□□□□ 0.49
MCF2L2-213ENST00000492331 NESP48681 1621 aa18.1■□□□□ 0.49
MCF2L2-213ENST00000492331 RSF1Q96T23 1441 aaPredicted RBP18.03■□□□□ 0.48
MCF2L2-213ENST00000492331 LAMC3Q9Y6N6 1575 aa17.99■□□□□ 0.47
MCF2L2-213ENST00000492331 CUX2O14529 1486 aa17.95■□□□□ 0.46
MCF2L2-213ENST00000492331 CADPSQ9ULU8 1353 aa17.91■□□□□ 0.46
MCF2L2-213ENST00000492331 PDS5BQ9NTI5 1447 aa17.91■□□□□ 0.46
MCF2L2-213ENST00000492331 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
MCF2L2-213ENST00000492331 KIF21AQ7Z4S6 1674 aa17.87■□□□□ 0.45
MCF2L2-213ENST00000492331 THOC2Q8NI27 1593 aaKnown RBP17.82■□□□□ 0.44
MCF2L2-213ENST00000492331 CFTRP13569 1480 aa17.74■□□□□ 0.43
MCF2L2-213ENST00000492331 FANCD2Q9BXW9 1451 aa17.72■□□□□ 0.43
MCF2L2-213ENST00000492331 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
MCF2L2-213ENST00000492331 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
MCF2L2-213ENST00000492331 CCDC88BA6NC98 1476 aa17.71■□□□□ 0.43
MCF2L2-213ENST00000492331 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
MCF2L2-213ENST00000492331 WDR62O43379 1518 aa17.63■□□□□ 0.41
MCF2L2-213ENST00000492331 PRDM2Q13029 1718 aa17.59■□□□□ 0.41
MCF2L2-213ENST00000492331 SUPT5HO00267 1087 aaKnown RBP17.57■□□□□ 0.4
MCF2L2-213ENST00000492331 URB2Q14146 1524 aaKnown RBP17.53■□□□□ 0.4
MCF2L2-213ENST00000492331 TOPBP1Q92547 1522 aa17.4■□□□□ 0.38
MCF2L2-213ENST00000492331 ABCC8Q09428 1581 aa17.39■□□□□ 0.37
MCF2L2-213ENST00000492331 DNMBPQ6XZF7 1577 aa17.36■□□□□ 0.37
MCF2L2-213ENST00000492331 IFT140Q96RY7 1462 aa17.34■□□□□ 0.37
MCF2L2-213ENST00000492331 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
MCF2L2-213ENST00000492331 OSCARQ8IYS5 282 aa17.25■□□□□ 0.35
MCF2L2-213ENST00000492331 POLA1P09884 1462 aaPredicted RBP17.24■□□□□ 0.35
MCF2L2-213ENST00000492331 TARBP1Q13395 1621 aaKnown RBP17.21■□□□□ 0.35
MCF2L2-213ENST00000492331 SOGA1O94964 1423 aa17.21■□□□□ 0.34
MCF2L2-213ENST00000492331 EIF4G3O43432 1585 aaKnown RBP17.2■□□□□ 0.34
MCF2L2-213ENST00000492331 RAD54L2Q9Y4B4 1467 aa17.2■□□□□ 0.34
MCF2L2-213ENST00000492331 AQRO60306 1485 aaKnown RBP eCLIP17.19■□□□□ 0.34
MCF2L2-213ENST00000492331 CUX1P39880 1505 aa17.19■□□□□ 0.34
MCF2L2-213ENST00000492331 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
MCF2L2-213ENST00000492331 TDRD9Q8NDG6 1382 aaKnown RBP17.15■□□□□ 0.34
MCF2L2-213ENST00000492331 FBLN2P98095 1184 aa17.12■□□□□ 0.33
MCF2L2-213ENST00000492331 TRIM41Q8WV44 630 aa17.11■□□□□ 0.33
MCF2L2-213ENST00000492331 CHD1O14646 1710 aa17.04■□□□□ 0.32
MCF2L2-213ENST00000492331 WRNQ14191 1432 aaPredicted RBP eCLIP17.03■□□□□ 0.32
MCF2L2-213ENST00000492331 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
MCF2L2-213ENST00000492331 SNAPC4Q5SXM2 1469 aa17■□□□□ 0.31
MCF2L2-213ENST00000492331 CHMP7Q8WUX9 453 aaPredicted RBP17■□□□□ 0.31
MCF2L2-213ENST00000492331 GRIN2BQ13224 1484 aa16.99■□□□□ 0.31
MCF2L2-213ENST00000492331 GAPVD1Q14C86 1478 aa16.99■□□□□ 0.31
MCF2L2-213ENST00000492331 SYNJ1O43426 1573 aa16.98■□□□□ 0.31
MCF2L2-213ENST00000492331 TOP2BQ02880 1626 aa16.98■□□□□ 0.31
MCF2L2-213ENST00000492331 BIVM-ERCC5R4GMW8 1640 aa16.98■□□□□ 0.31
MCF2L2-213ENST00000492331 ABCA10Q8WWZ4 1543 aa16.97■□□□□ 0.31
MCF2L2-213ENST00000492331 PBRM1Q86U86 1689 aa16.95■□□□□ 0.3
MCF2L2-213ENST00000492331 MAGI1Q96QZ7 1491 aaPredicted RBP16.95■□□□□ 0.3
MCF2L2-213ENST00000492331 RIMBP3CA6NJZ7 1639 aa16.94■□□□□ 0.3
MCF2L2-213ENST00000492331 RIMBP3BA6NNM3 1639 aa16.94■□□□□ 0.3
MCF2L2-213ENST00000492331 RIMBP3Q9UFD9 1639 aa16.94■□□□□ 0.3
MCF2L2-213ENST00000492331 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
MCF2L2-213ENST00000492331 ARHGEF11O15085 1522 aa16.91■□□□□ 0.3
MCF2L2-213ENST00000492331 SYNJ2O15056 1496 aa16.9■□□□□ 0.3
MCF2L2-213ENST00000492331 CYB5RLQ6IPT4 315 aa16.85■□□□□ 0.29
MCF2L2-213ENST00000492331 CLASP1Q7Z460 1538 aa16.8■□□□□ 0.28
MCF2L2-213ENST00000492331 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
MCF2L2-213ENST00000492331 ERICH3Q5RHP9 1530 aa16.77■□□□□ 0.28
MCF2L2-213ENST00000492331 GRIN2AQ12879 1464 aa16.77■□□□□ 0.28
MCF2L2-213ENST00000492331 FHAD1B1AJZ9 1412 aa16.77■□□□□ 0.27
MCF2L2-213ENST00000492331 ARAP1Q96P48 1450 aa16.75■□□□□ 0.27
MCF2L2-213ENST00000492331 KIF27Q86VH2 1401 aa16.7■□□□□ 0.26
MCF2L2-213ENST00000492331 CEP170Q5SW79 1584 aa16.69■□□□□ 0.26
MCF2L2-213ENST00000492331 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
MCF2L2-213ENST00000492331 NUP160Q12769 1436 aa16.68■□□□□ 0.26
MCF2L2-213ENST00000492331 IGF1RP08069 1367 aa16.64■□□□□ 0.26
MCF2L2-213ENST00000492331 TRHP20396 242 aaPredicted RBP16.63■□□□□ 0.25
MCF2L2-213ENST00000492331 ERCC6L2Q5T890 1561 aa16.6■□□□□ 0.25
MCF2L2-213ENST00000492331 CUL7Q14999 1698 aa16.59■□□□□ 0.25
MCF2L2-213ENST00000492331 JPH4Q96JJ6 628 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms