RNA–Protein interactions for RNA: ENST00000492034.1

POLR1A-209, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-209ENST00000492034 NISCHQ9Y2I1 1504 aa31.87■■■□□ 2.69
POLR1A-209ENST00000492034 CCDC180Q9P1Z9 1646 aa27.91■■■□□ 2.06
POLR1A-209ENST00000492034 ZCCHC6Q5VYS8 1495 aaKnown RBP26.7■■□□□ 1.87
POLR1A-209ENST00000492034 ABCC9O60706 1549 aa26.5■■□□□ 1.83
POLR1A-209ENST00000492034 DCAF1Q9Y4B6 1507 aa26.43■■□□□ 1.82
POLR1A-209ENST00000492034 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
POLR1A-209ENST00000492034 MYO15BQ96JP2 1530 aa26.23■■□□□ 1.79
POLR1A-209ENST00000492034 NACADO15069 1562 aa26.1■■□□□ 1.77
POLR1A-209ENST00000492034 RB1CC1Q8TDY2 1594 aa25.9■■□□□ 1.74
POLR1A-209ENST00000492034 SHROOM4Q9ULL8 1493 aa25.73■■□□□ 1.71
POLR1A-209ENST00000492034 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
POLR1A-209ENST00000492034 UNC13AQ9UPW8 1703 aa25.17■■□□□ 1.62
POLR1A-209ENST00000492034 BICRAQ9NZM4 1560 aa24.99■■□□□ 1.59
POLR1A-209ENST00000492034 PABPN1Q86U42 306 aaKnown RBP eCLIP24.96■■□□□ 1.59
POLR1A-209ENST00000492034 SUPT5HO00267 1087 aaKnown RBP24.74■■□□□ 1.55
POLR1A-209ENST00000492034 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
POLR1A-209ENST00000492034 BAZ1AQ9NRL2 1556 aaPredicted RBP24.66■■□□□ 1.54
POLR1A-209ENST00000492034 RSF1Q96T23 1441 aaPredicted RBP24.62■■□□□ 1.53
POLR1A-209ENST00000492034 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
POLR1A-209ENST00000492034 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
POLR1A-209ENST00000492034 EIF4G1Q04637 1599 aaKnown RBP24.31■■□□□ 1.48
POLR1A-209ENST00000492034 WIZO95785 1651 aa24.3■■□□□ 1.48
POLR1A-209ENST00000492034 PEG3Q9GZU2 1588 aa24.26■■□□□ 1.47
POLR1A-209ENST00000492034 SMARCA2P51531 1590 aa24.24■■□□□ 1.47
POLR1A-209ENST00000492034 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
POLR1A-209ENST00000492034 TOP2AP11388 1531 aaKnown RBP24.14■■□□□ 1.45
POLR1A-209ENST00000492034 NCAPD3P42695 1498 aa24.08■■□□□ 1.45
POLR1A-209ENST00000492034 BAZ1BQ9UIG0 1483 aaKnown RBP24.07■■□□□ 1.44
POLR1A-209ENST00000492034 HMGXB3Q12766 1538 aa24■■□□□ 1.43
POLR1A-209ENST00000492034 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
POLR1A-209ENST00000492034 CCDC88BA6NC98 1476 aa23.87■■□□□ 1.41
POLR1A-209ENST00000492034 CHIC1Q5VXU3 224 aa23.59■■□□□ 1.37
POLR1A-209ENST00000492034 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
POLR1A-209ENST00000492034 CFTRP13569 1480 aa23.46■■□□□ 1.35
POLR1A-209ENST00000492034 CADPSQ9ULU8 1353 aa23.45■■□□□ 1.34
POLR1A-209ENST00000492034 TRIM41Q8WV44 630 aa23.38■■□□□ 1.33
POLR1A-209ENST00000492034 LAMC3Q9Y6N6 1575 aa23.28■■□□□ 1.32
POLR1A-209ENST00000492034 PRDM2Q13029 1718 aa23.25■■□□□ 1.31
POLR1A-209ENST00000492034 WRNQ14191 1432 aaPredicted RBP eCLIP23.23■■□□□ 1.31
POLR1A-209ENST00000492034 ABCC8Q09428 1581 aa23.21■■□□□ 1.31
POLR1A-209ENST00000492034 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
POLR1A-209ENST00000492034 NESP48681 1621 aa23.15■■□□□ 1.3
POLR1A-209ENST00000492034 FANCD2Q9BXW9 1451 aa23.14■■□□□ 1.29
POLR1A-209ENST00000492034 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
POLR1A-209ENST00000492034 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
POLR1A-209ENST00000492034 SYNJ1O43426 1573 aa23.02■■□□□ 1.28
POLR1A-209ENST00000492034 BIVM-ERCC5R4GMW8 1640 aa22.98■■□□□ 1.27
POLR1A-209ENST00000492034 CUX1P39880 1505 aa22.98■■□□□ 1.27
POLR1A-209ENST00000492034 DNMBPQ6XZF7 1577 aa22.9■■□□□ 1.26
POLR1A-209ENST00000492034 EEA1Q15075 1411 aa22.89■■□□□ 1.25
POLR1A-209ENST00000492034 KIF21AQ7Z4S6 1674 aa22.86■■□□□ 1.25
POLR1A-209ENST00000492034 TOPBP1Q92547 1522 aa22.85■■□□□ 1.25
POLR1A-209ENST00000492034 ERCC6Q03468 1493 aa22.84■■□□□ 1.25
POLR1A-209ENST00000492034 MRC2Q9UBG0 1479 aa22.82■■□□□ 1.24
POLR1A-209ENST00000492034 FAM9AQ8IZU1 332 aaPredicted RBP22.81■■□□□ 1.24
POLR1A-209ENST00000492034 URB2Q14146 1524 aaKnown RBP22.8■■□□□ 1.24
POLR1A-209ENST00000492034 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
POLR1A-209ENST00000492034 SOGA1O94964 1423 aa22.78■■□□□ 1.24
POLR1A-209ENST00000492034 CSRNP3Q8WYN3 585 aa22.73■■□□□ 1.23
POLR1A-209ENST00000492034 KIF27Q86VH2 1401 aa22.71■■□□□ 1.23
POLR1A-209ENST00000492034 POLA1P09884 1462 aaPredicted RBP22.71■■□□□ 1.23
POLR1A-209ENST00000492034 WDR62O43379 1518 aa22.67■■□□□ 1.22
POLR1A-209ENST00000492034 RUSC2Q8N2Y8 1516 aa22.66■■□□□ 1.22
POLR1A-209ENST00000492034 ABCA10Q8WWZ4 1543 aa22.62■■□□□ 1.21
POLR1A-209ENST00000492034 CUX2O14529 1486 aa22.62■■□□□ 1.21
POLR1A-209ENST00000492034 LOC105371045A0A1W2PR82 267 aa22.61■■□□□ 1.21
POLR1A-209ENST00000492034 RAD54L2Q9Y4B4 1467 aa22.6■■□□□ 1.21
POLR1A-209ENST00000492034 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
POLR1A-209ENST00000492034 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
POLR1A-209ENST00000492034 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
POLR1A-209ENST00000492034 IGF1RP08069 1367 aa22.48■■□□□ 1.19
POLR1A-209ENST00000492034 GOLGA3Q08378 1498 aa22.47■■□□□ 1.19
POLR1A-209ENST00000492034 KIF21BO75037 1637 aa22.47■■□□□ 1.19
POLR1A-209ENST00000492034 WDR97A6NE52 1622 aa22.46■■□□□ 1.19
POLR1A-209ENST00000492034 TDRD9Q8NDG6 1382 aaKnown RBP22.44■■□□□ 1.18
POLR1A-209ENST00000492034 PRXQ9BXM0 1461 aa22.44■■□□□ 1.18
POLR1A-209ENST00000492034 GAPVD1Q14C86 1478 aa22.43■■□□□ 1.18
POLR1A-209ENST00000492034 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
POLR1A-209ENST00000492034 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
POLR1A-209ENST00000492034 ERICH3Q5RHP9 1530 aa22.4■■□□□ 1.18
POLR1A-209ENST00000492034 CARMIL1Q5VZK9 1371 aa22.39■■□□□ 1.18
POLR1A-209ENST00000492034 ABCA5Q8WWZ7 1642 aa22.39■■□□□ 1.18
POLR1A-209ENST00000492034 TNIKQ9UKE5 1360 aa22.38■■□□□ 1.17
POLR1A-209ENST00000492034 RAPGEF2Q9Y4G8 1499 aa22.34■■□□□ 1.17
POLR1A-209ENST00000492034 CUL7Q14999 1698 aa22.33■■□□□ 1.16
POLR1A-209ENST00000492034 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
POLR1A-209ENST00000492034 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.161e-6■□□□□ 8.9
POLR1A-209ENST00000492034 ZNF608Q9ULD9 1512 aaPredicted RBP22.28■■□□□ 1.16
POLR1A-209ENST00000492034 PBRM1Q86U86 1689 aa22.23■■□□□ 1.15
POLR1A-209ENST00000492034 FHAD1B1AJZ9 1412 aa22.22■■□□□ 1.15
POLR1A-209ENST00000492034 EIF4G3O43432 1585 aaKnown RBP22.21■■□□□ 1.15
POLR1A-209ENST00000492034 CEP162Q5TB80 1403 aa22.17■■□□□ 1.14
POLR1A-209ENST00000492034 MAGI1Q96QZ7 1491 aaPredicted RBP22.15■■□□□ 1.14
POLR1A-209ENST00000492034 ADAMTS12P58397 1594 aa22.12■■□□□ 1.13
POLR1A-209ENST00000492034 SNAPC4Q5SXM2 1469 aa22.12■■□□□ 1.13
POLR1A-209ENST00000492034 CLIP1P30622 1438 aa22.09■■□□□ 1.13
POLR1A-209ENST00000492034 CHMP7Q8WUX9 453 aaPredicted RBP22.06■■□□□ 1.12
POLR1A-209ENST00000492034 SYNJ2O15056 1496 aa22.06■■□□□ 1.12
POLR1A-209ENST00000492034 GRIN2AQ12879 1464 aa21.99■■□□□ 1.11
POLR1A-209ENST00000492034 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms