RNA–Protein interactions for RNA: ENST00000491887.3

RN7SL518P-201, Transcript of RNA, 7SL, cytoplasmic 518, pseudogene, humanhuman

BASIC

Gene RN7SL518P, Length 280 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL518P-201ENST00000491887 NISCHQ9Y2I1 1504 aa17.22■□□□□ 0.35
RN7SL518P-201ENST00000491887 ABCC9O60706 1549 aa15.33■□□□□ 0.05
RN7SL518P-201ENST00000491887 CCDC180Q9P1Z9 1646 aa15.21■□□□□ 0.03
RN7SL518P-201ENST00000491887 DCAF8L2P0C7V8 631 aa14.77□□□□□ -0.05
RN7SL518P-201ENST00000491887 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.08
RN7SL518P-201ENST00000491887 NACADO15069 1562 aa14.46□□□□□ -0.09
RN7SL518P-201ENST00000491887 PABPN1Q86U42 306 aaKnown RBP eCLIP14.43□□□□□ -0.1
RN7SL518P-201ENST00000491887 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
RN7SL518P-201ENST00000491887 MYO15BQ96JP2 1530 aa14.27□□□□□ -0.12
RN7SL518P-201ENST00000491887 ZCCHC6Q5VYS8 1495 aaKnown RBP14.27□□□□□ -0.12
RN7SL518P-201ENST00000491887 DCAF1Q9Y4B6 1507 aa14.15□□□□□ -0.14
RN7SL518P-201ENST00000491887 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
RN7SL518P-201ENST00000491887 UNC13AQ9UPW8 1703 aa14.07□□□□□ -0.16
RN7SL518P-201ENST00000491887 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
RN7SL518P-201ENST00000491887 SHROOM4Q9ULL8 1493 aa13.84□□□□□ -0.19
RN7SL518P-201ENST00000491887 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
RN7SL518P-201ENST00000491887 CC2D2AQ9P2K1 1620 aa13.75□□□□□ -0.21
RN7SL518P-201ENST00000491887 EIF4G1Q04637 1599 aaKnown RBP13.75□□□□□ -0.21
RN7SL518P-201ENST00000491887 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
RN7SL518P-201ENST00000491887 ATAD2BQ9ULI0 1458 aa13.41□□□□□ -0.26
RN7SL518P-201ENST00000491887 SMARCA4P51532 1647 aa13.35□□□□□ -0.27
RN7SL518P-201ENST00000491887 BAZ1AQ9NRL2 1556 aaPredicted RBP13.32□□□□□ -0.28
RN7SL518P-201ENST00000491887 SMARCA2P51531 1590 aa13.31□□□□□ -0.28
RN7SL518P-201ENST00000491887 MROH2BQ7Z745 1585 aa13.31□□□□□ -0.28
RN7SL518P-201ENST00000491887 BAZ1BQ9UIG0 1483 aaKnown RBP13.29□□□□□ -0.28
RN7SL518P-201ENST00000491887 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
RN7SL518P-201ENST00000491887 ERCC6Q03468 1493 aa13.22□□□□□ -0.29
RN7SL518P-201ENST00000491887 NESP48681 1621 aa13.21□□□□□ -0.3
RN7SL518P-201ENST00000491887 PEG3Q9GZU2 1588 aa13.18□□□□□ -0.3
RN7SL518P-201ENST00000491887 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
RN7SL518P-201ENST00000491887 WIZO95785 1651 aa13.11□□□□□ -0.31
RN7SL518P-201ENST00000491887 CADPSQ9ULU8 1353 aa13.07□□□□□ -0.32
RN7SL518P-201ENST00000491887 CUX2O14529 1486 aa13.04□□□□□ -0.32
RN7SL518P-201ENST00000491887 PDS5BQ9NTI5 1447 aa13.04□□□□□ -0.32
RN7SL518P-201ENST00000491887 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
RN7SL518P-201ENST00000491887 LAMC3Q9Y6N6 1575 aa13□□□□□ -0.33
RN7SL518P-201ENST00000491887 TOP2AP11388 1531 aaKnown RBP12.93□□□□□ -0.34
RN7SL518P-201ENST00000491887 CFTRP13569 1480 aa12.9□□□□□ -0.34
RN7SL518P-201ENST00000491887 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
RN7SL518P-201ENST00000491887 FANCD2Q9BXW9 1451 aa12.89□□□□□ -0.35
RN7SL518P-201ENST00000491887 THOC2Q8NI27 1593 aaKnown RBP12.89□□□□□ -0.35
RN7SL518P-201ENST00000491887 MRC2Q9UBG0 1479 aa12.88□□□□□ -0.35
RN7SL518P-201ENST00000491887 KIF21AQ7Z4S6 1674 aa12.88□□□□□ -0.35
RN7SL518P-201ENST00000491887 CEP164Q9UPV0 1460 aa12.85□□□□□ -0.35
RN7SL518P-201ENST00000491887 SUPT5HO00267 1087 aaKnown RBP12.84□□□□□ -0.35
RN7SL518P-201ENST00000491887 WDR62O43379 1518 aa12.78□□□□□ -0.36
RN7SL518P-201ENST00000491887 URB2Q14146 1524 aaKnown RBP12.76□□□□□ -0.37
RN7SL518P-201ENST00000491887 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
RN7SL518P-201ENST00000491887 TOPBP1Q92547 1522 aa12.63□□□□□ -0.39
RN7SL518P-201ENST00000491887 ZNF608Q9ULD9 1512 aaPredicted RBP12.62□□□□□ -0.39
RN7SL518P-201ENST00000491887 TRIM41Q8WV44 630 aa12.6□□□□□ -0.39
RN7SL518P-201ENST00000491887 IFT140Q96RY7 1462 aa12.59□□□□□ -0.39
RN7SL518P-201ENST00000491887 ABCC8Q09428 1581 aa12.59□□□□□ -0.39
RN7SL518P-201ENST00000491887 AQRO60306 1485 aaKnown RBP eCLIP12.57□□□□□ -0.4
RN7SL518P-201ENST00000491887 FBLN2P98095 1184 aa12.56□□□□□ -0.4
RN7SL518P-201ENST00000491887 DNMBPQ6XZF7 1577 aa12.55□□□□□ -0.4
RN7SL518P-201ENST00000491887 TDRD9Q8NDG6 1382 aaKnown RBP12.55□□□□□ -0.4
RN7SL518P-201ENST00000491887 SOGA1O94964 1423 aa12.54□□□□□ -0.4
RN7SL518P-201ENST00000491887 RAD54L2Q9Y4B4 1467 aa12.54□□□□□ -0.4
RN7SL518P-201ENST00000491887 PRDM2Q13029 1718 aa12.53□□□□□ -0.4
RN7SL518P-201ENST00000491887 POLA1P09884 1462 aaPredicted RBP12.53□□□□□ -0.4
RN7SL518P-201ENST00000491887 CUX1P39880 1505 aa12.48□□□□□ -0.41
RN7SL518P-201ENST00000491887 FGD5Q6ZNL6 1462 aa12.48□□□□□ -0.41
RN7SL518P-201ENST00000491887 TARBP1Q13395 1621 aaKnown RBP12.44□□□□□ -0.42
RN7SL518P-201ENST00000491887 CHMP7Q8WUX9 453 aaPredicted RBP12.44□□□□□ -0.42
RN7SL518P-201ENST00000491887 EIF4G3O43432 1585 aaKnown RBP12.43□□□□□ -0.42
RN7SL518P-201ENST00000491887 CYB5RLQ6IPT4 315 aa12.39□□□□□ -0.43
RN7SL518P-201ENST00000491887 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
RN7SL518P-201ENST00000491887 WRNQ14191 1432 aaPredicted RBP eCLIP12.37□□□□□ -0.43
RN7SL518P-201ENST00000491887 GRIN2BQ13224 1484 aa12.35□□□□□ -0.43
RN7SL518P-201ENST00000491887 GAPVD1Q14C86 1478 aa12.34□□□□□ -0.43
RN7SL518P-201ENST00000491887 ABCA10Q8WWZ4 1543 aa12.31□□□□□ -0.44
RN7SL518P-201ENST00000491887 ARHGEF11O15085 1522 aa12.3□□□□□ -0.44
RN7SL518P-201ENST00000491887 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
RN7SL518P-201ENST00000491887 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
RN7SL518P-201ENST00000491887 RIMBP3CA6NJZ7 1639 aa12.29□□□□□ -0.44
RN7SL518P-201ENST00000491887 RIMBP3BA6NNM3 1639 aa12.29□□□□□ -0.44
RN7SL518P-201ENST00000491887 RIMBP3Q9UFD9 1639 aa12.29□□□□□ -0.44
RN7SL518P-201ENST00000491887 SYNJ2O15056 1496 aa12.28□□□□□ -0.44
RN7SL518P-201ENST00000491887 CHD1O14646 1710 aa12.27□□□□□ -0.45
RN7SL518P-201ENST00000491887 TOP2BQ02880 1626 aa12.26□□□□□ -0.45
RN7SL518P-201ENST00000491887 WDR97A6NE52 1622 aa12.24□□□□□ -0.45
RN7SL518P-201ENST00000491887 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
RN7SL518P-201ENST00000491887 ARAP1Q96P48 1450 aa12.21□□□□□ -0.46
RN7SL518P-201ENST00000491887 ABCA5Q8WWZ7 1642 aa12.2□□□□□ -0.46
RN7SL518P-201ENST00000491887 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
RN7SL518P-201ENST00000491887 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
RN7SL518P-201ENST00000491887 CLASP1Q7Z460 1538 aa12.18□□□□□ -0.46
RN7SL518P-201ENST00000491887 GRIN2AQ12879 1464 aa12.18□□□□□ -0.46
RN7SL518P-201ENST00000491887 PBRM1Q86U86 1689 aa12.16□□□□□ -0.46
RN7SL518P-201ENST00000491887 IGF1RP08069 1367 aa12.16□□□□□ -0.46
RN7SL518P-201ENST00000491887 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
RN7SL518P-201ENST00000491887 NUP160Q12769 1436 aa12.13□□□□□ -0.47
RN7SL518P-201ENST00000491887 KIF27Q86VH2 1401 aa12.13□□□□□ -0.47
RN7SL518P-201ENST00000491887 ERICH3Q5RHP9 1530 aa12.13□□□□□ -0.47
RN7SL518P-201ENST00000491887 ADAMTS12P58397 1594 aa12.12□□□□□ -0.47
RN7SL518P-201ENST00000491887 CEP170Q5SW79 1584 aa12.09□□□□□ -0.47
RN7SL518P-201ENST00000491887 ERCC6L2Q5T890 1561 aa12.09□□□□□ -0.47
RN7SL518P-201ENST00000491887 CARMIL1Q5VZK9 1371 aa12.08□□□□□ -0.48
RN7SL518P-201ENST00000491887 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 284.4 ms