RNA–Protein interactions for RNA: ENST00000491831.5

AFF4-209, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 1 (best)

Gene AFF4, Length 1,667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-209ENST00000491831 NISCHQ9Y2I1 1504 aa40.42■■■■■ 4.06
AFF4-209ENST00000491831 CCDC180Q9P1Z9 1646 aa35.66■■■■□ 3.3
AFF4-209ENST00000491831 ABCC9O60706 1549 aa34.57■■■■□ 3.12
AFF4-209ENST00000491831 ZCCHC6Q5VYS8 1495 aaKnown RBP33.79■■■■□ 3
AFF4-209ENST00000491831 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
AFF4-209ENST00000491831 NACADO15069 1562 aa33.37■■■□□ 2.93
AFF4-209ENST00000491831 DCAF1Q9Y4B6 1507 aa33.34■■■□□ 2.93
AFF4-209ENST00000491831 RB1CC1Q8TDY2 1594 aa33.31■■■□□ 2.92
AFF4-209ENST00000491831 MYO15BQ96JP2 1530 aa33.25■■■□□ 2.91
AFF4-209ENST00000491831 UNC13AQ9UPW8 1703 aa32.77■■■□□ 2.84
AFF4-209ENST00000491831 SCRIBQ14160 1630 aa32.76■■■□□ 2.84
AFF4-209ENST00000491831 SHROOM4Q9ULL8 1493 aa32.46■■■□□ 2.79
AFF4-209ENST00000491831 BICRAQ9NZM4 1560 aa32.42■■■□□ 2.78
AFF4-209ENST00000491831 PABPN1Q86U42 306 aaKnown RBP eCLIP32.41■■■□□ 2.78
AFF4-209ENST00000491831 CECR2Q9BXF3 1484 aa31.56■■■□□ 2.64
AFF4-209ENST00000491831 EIF4G1Q04637 1599 aaKnown RBP31.48■■■□□ 2.63
AFF4-209ENST00000491831 DNAJC5BQ9UF47 199 aa31.32■■■□□ 2.6
AFF4-209ENST00000491831 SMARCA4P51532 1647 aa31.3■■■□□ 2.6
AFF4-209ENST00000491831 MROH2BQ7Z745 1585 aa31.26■■■□□ 2.59
AFF4-209ENST00000491831 CC2D2AQ9P2K1 1620 aa31.26■■■□□ 2.59
AFF4-209ENST00000491831 BAZ1AQ9NRL2 1556 aaPredicted RBP31.25■■■□□ 2.59
AFF4-209ENST00000491831 RSF1Q96T23 1441 aaPredicted RBP31.02■■■□□ 2.56
AFF4-209ENST00000491831 WIZO95785 1651 aa30.99■■■□□ 2.55
AFF4-209ENST00000491831 ATAD2BQ9ULI0 1458 aa30.96■■■□□ 2.55
AFF4-209ENST00000491831 PEG3Q9GZU2 1588 aa30.89■■■□□ 2.54
AFF4-209ENST00000491831 SMARCA2P51531 1590 aa30.87■■■□□ 2.53
AFF4-209ENST00000491831 NCAPD3P42695 1498 aa30.79■■■□□ 2.52
AFF4-209ENST00000491831 BAZ1BQ9UIG0 1483 aaKnown RBP30.73■■■□□ 2.51
AFF4-209ENST00000491831 SUPT5HO00267 1087 aaKnown RBP30.71■■■□□ 2.51
AFF4-209ENST00000491831 HMGXB3Q12766 1538 aa30.7■■■□□ 2.51
AFF4-209ENST00000491831 TOP2AP11388 1531 aaKnown RBP30.57■■■□□ 2.48
AFF4-209ENST00000491831 CCDC88BA6NC98 1476 aa30.24■■■□□ 2.43
AFF4-209ENST00000491831 NESP48681 1621 aa30.11■■■□□ 2.41
AFF4-209ENST00000491831 CADPSQ9ULU8 1353 aa29.94■■■□□ 2.38
AFF4-209ENST00000491831 LAMC3Q9Y6N6 1575 aa29.91■■■□□ 2.38
AFF4-209ENST00000491831 CFTRP13569 1480 aa29.89■■■□□ 2.38
AFF4-209ENST00000491831 PRDM2Q13029 1718 aa29.77■■■□□ 2.36
AFF4-209ENST00000491831 KIF21AQ7Z4S6 1674 aa29.75■■■□□ 2.35
AFF4-209ENST00000491831 ERCC6Q03468 1493 aa29.66■■■□□ 2.34
AFF4-209ENST00000491831 FANCD2Q9BXW9 1451 aa29.66■■■□□ 2.34
AFF4-209ENST00000491831 PDS5BQ9NTI5 1447 aa29.65■■■□□ 2.34
AFF4-209ENST00000491831 CEP164Q9UPV0 1460 aa29.55■■■□□ 2.32
AFF4-209ENST00000491831 THOC2Q8NI27 1593 aaKnown RBP29.47■■■□□ 2.31
AFF4-209ENST00000491831 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
AFF4-209ENST00000491831 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
AFF4-209ENST00000491831 URB2Q14146 1524 aaKnown RBP29.39■■■□□ 2.3
AFF4-209ENST00000491831 WDR62O43379 1518 aa29.29■■■□□ 2.28
AFF4-209ENST00000491831 CUX1P39880 1505 aa29.28■■■□□ 2.28
AFF4-209ENST00000491831 TOPBP1Q92547 1522 aa29.26■■■□□ 2.27
AFF4-209ENST00000491831 DNMBPQ6XZF7 1577 aa29.24■■■□□ 2.27
AFF4-209ENST00000491831 SYNJ1O43426 1573 aa29.23■■■□□ 2.27
AFF4-209ENST00000491831 WRNQ14191 1432 aaPredicted RBP eCLIP29.2■■■□□ 2.27
AFF4-209ENST00000491831 BIVM-ERCC5R4GMW8 1640 aa29.1■■■□□ 2.25
AFF4-209ENST00000491831 TOP2BQ02880 1626 aa29.1■■■□□ 2.25
AFF4-209ENST00000491831 FGD5Q6ZNL6 1462 aa29.08■■■□□ 2.25
AFF4-209ENST00000491831 CUX2O14529 1486 aa29.06■■■□□ 2.24
AFF4-209ENST00000491831 POLA1P09884 1462 aaPredicted RBP29.06■■■□□ 2.24
AFF4-209ENST00000491831 RAD54L2Q9Y4B4 1467 aa28.99■■■□□ 2.23
AFF4-209ENST00000491831 TARBP1Q13395 1621 aaKnown RBP28.92■■■□□ 2.22
AFF4-209ENST00000491831 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
AFF4-209ENST00000491831 SOGA1O94964 1423 aa28.89■■■□□ 2.22
AFF4-209ENST00000491831 IFT140Q96RY7 1462 aa28.87■■■□□ 2.21
AFF4-209ENST00000491831 ZNF608Q9ULD9 1512 aaPredicted RBP28.86■■■□□ 2.21
AFF4-209ENST00000491831 TRIM41Q8WV44 630 aa28.86■■■□□ 2.21
AFF4-209ENST00000491831 WDR97A6NE52 1622 aa28.84■■■□□ 2.21
AFF4-209ENST00000491831 TDRD9Q8NDG6 1382 aaKnown RBP28.75■■■□□ 2.19
AFF4-209ENST00000491831 ABCA10Q8WWZ4 1543 aa28.75■■■□□ 2.19
AFF4-209ENST00000491831 EIF4G3O43432 1585 aaKnown RBP28.73■■■□□ 2.19
AFF4-209ENST00000491831 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.191e-6■■■□□ 16.9
AFF4-209ENST00000491831 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
AFF4-209ENST00000491831 RUSC2Q8N2Y8 1516 aa28.62■■■□□ 2.17
AFF4-209ENST00000491831 GAPVD1Q14C86 1478 aa28.58■■■□□ 2.17
AFF4-209ENST00000491831 PBRM1Q86U86 1689 aa28.57■■■□□ 2.16
AFF4-209ENST00000491831 KIF27Q86VH2 1401 aa28.5■■■□□ 2.15
AFF4-209ENST00000491831 GRIN2BQ13224 1484 aa28.47■■■□□ 2.15
AFF4-209ENST00000491831 SNAPC4Q5SXM2 1469 aa28.46■■■□□ 2.15
AFF4-209ENST00000491831 FAM9AQ8IZU1 332 aaPredicted RBP28.42■■■□□ 2.14
AFF4-209ENST00000491831 ERICH3Q5RHP9 1530 aa28.38■■■□□ 2.13
AFF4-209ENST00000491831 IGF1RP08069 1367 aa28.37■■■□□ 2.13
AFF4-209ENST00000491831 ADAMTS12P58397 1594 aa28.35■■■□□ 2.13
AFF4-209ENST00000491831 MAGI1Q96QZ7 1491 aaPredicted RBP28.32■■■□□ 2.12
AFF4-209ENST00000491831 CHD1O14646 1710 aa28.32■■■□□ 2.12
AFF4-209ENST00000491831 FBLN2P98095 1184 aa28.26■■■□□ 2.12
AFF4-209ENST00000491831 CUL7Q14999 1698 aa28.25■■■□□ 2.11
AFF4-209ENST00000491831 SYNJ2O15056 1496 aa28.23■■■□□ 2.11
AFF4-209ENST00000491831 FHAD1B1AJZ9 1412 aa28.22■■■□□ 2.11
AFF4-209ENST00000491831 EEA1Q15075 1411 aa28.21■■■□□ 2.11
AFF4-209ENST00000491831 CSRNP3Q8WYN3 585 aa28.2■■■□□ 2.11
AFF4-209ENST00000491831 CARMIL1Q5VZK9 1371 aa28.2■■■□□ 2.1
AFF4-209ENST00000491831 CHMP7Q8WUX9 453 aaPredicted RBP28.17■■■□□ 2.1
AFF4-209ENST00000491831 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
AFF4-209ENST00000491831 PRXQ9BXM0 1461 aa28.14■■■□□ 2.09
AFF4-209ENST00000491831 EHMT2Q96KQ7 1210 aa28.13■■■□□ 2.09
AFF4-209ENST00000491831 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.09
AFF4-209ENST00000491831 CEP170Q5SW79 1584 aa28.07■■■□□ 2.08
AFF4-209ENST00000491831 KIF21BO75037 1637 aa28.02■■■□□ 2.08
AFF4-209ENST00000491831 NUP160Q12769 1436 aa27.98■■■□□ 2.07
AFF4-209ENST00000491831 OSCARQ8IYS5 282 aa27.97■■■□□ 2.07
AFF4-209ENST00000491831 CLASP1Q7Z460 1538 aa27.93■■■□□ 2.06
AFF4-209ENST00000491831 GOLGA3Q08378 1498 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms