RNA–Protein interactions for RNA: ENST00000491641.5

CYTH3-210, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-210ENST00000491641 NISCHQ9Y2I1 1504 aa38.14■■■■□ 3.7
CYTH3-210ENST00000491641 CCDC180Q9P1Z9 1646 aa33.91■■■■□ 3.02
CYTH3-210ENST00000491641 ABCC9O60706 1549 aa33.53■■■□□ 2.96
CYTH3-210ENST00000491641 DCAF8L2P0C7V8 631 aa32.1■■■□□ 2.73
CYTH3-210ENST00000491641 RB1CC1Q8TDY2 1594 aa32.07■■■□□ 2.72
CYTH3-210ENST00000491641 NACADO15069 1562 aa31.98■■■□□ 2.71
CYTH3-210ENST00000491641 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.66
CYTH3-210ENST00000491641 ZCCHC6Q5VYS8 1495 aaKnown RBP31.69■■■□□ 2.66
CYTH3-210ENST00000491641 DCAF1Q9Y4B6 1507 aa31.49■■■□□ 2.63
CYTH3-210ENST00000491641 PABPN1Q86U42 306 aaKnown RBP eCLIP31.38■■■□□ 2.61
CYTH3-210ENST00000491641 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
CYTH3-210ENST00000491641 BICRAQ9NZM4 1560 aa31.17■■■□□ 2.58
CYTH3-210ENST00000491641 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
CYTH3-210ENST00000491641 SCRIBQ14160 1630 aa31■■■□□ 2.55
CYTH3-210ENST00000491641 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.5
CYTH3-210ENST00000491641 EIF4G1Q04637 1599 aaKnown RBP30.33■■■□□ 2.45
CYTH3-210ENST00000491641 CC2D2AQ9P2K1 1620 aa30.28■■■□□ 2.44
CYTH3-210ENST00000491641 CECR2Q9BXF3 1484 aa30.13■■■□□ 2.41
CYTH3-210ENST00000491641 SMARCA4P51532 1647 aa29.61■■■□□ 2.33
CYTH3-210ENST00000491641 NCAPD3P42695 1498 aa29.56■■■□□ 2.32
CYTH3-210ENST00000491641 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
CYTH3-210ENST00000491641 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
CYTH3-210ENST00000491641 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
CYTH3-210ENST00000491641 MROH2BQ7Z745 1585 aa29.42■■■□□ 2.3
CYTH3-210ENST00000491641 HMGXB3Q12766 1538 aa29.33■■■□□ 2.29
CYTH3-210ENST00000491641 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
CYTH3-210ENST00000491641 BAZ1BQ9UIG0 1483 aaKnown RBP29.27■■■□□ 2.28
CYTH3-210ENST00000491641 WIZO95785 1651 aa29.08■■■□□ 2.25
CYTH3-210ENST00000491641 RSF1Q96T23 1441 aaPredicted RBP29.02■■■□□ 2.24
CYTH3-210ENST00000491641 NESP48681 1621 aa28.97■■■□□ 2.23
CYTH3-210ENST00000491641 ERCC6Q03468 1493 aa28.88■■■□□ 2.21
CYTH3-210ENST00000491641 LAMC3Q9Y6N6 1575 aa28.77■■■□□ 2.2
CYTH3-210ENST00000491641 CADPSQ9ULU8 1353 aa28.71■■■□□ 2.19
CYTH3-210ENST00000491641 TOP2AP11388 1531 aaKnown RBP28.7■■■□□ 2.19
CYTH3-210ENST00000491641 PDS5BQ9NTI5 1447 aa28.62■■■□□ 2.17
CYTH3-210ENST00000491641 CUX2O14529 1486 aa28.62■■■□□ 2.17
CYTH3-210ENST00000491641 KIF21AQ7Z4S6 1674 aa28.55■■■□□ 2.16
CYTH3-210ENST00000491641 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
CYTH3-210ENST00000491641 CFTRP13569 1480 aa28.46■■■□□ 2.15
CYTH3-210ENST00000491641 CCDC88BA6NC98 1476 aa28.44■■■□□ 2.14
CYTH3-210ENST00000491641 FANCD2Q9BXW9 1451 aa28.36■■■□□ 2.13
CYTH3-210ENST00000491641 MRC2Q9UBG0 1479 aa28.33■■■□□ 2.13
CYTH3-210ENST00000491641 CEP164Q9UPV0 1460 aa28.32■■■□□ 2.12
CYTH3-210ENST00000491641 SUPT5HO00267 1087 aaKnown RBP28.31■■■□□ 2.12
CYTH3-210ENST00000491641 WDR62O43379 1518 aa28.23■■■□□ 2.11
CYTH3-210ENST00000491641 DNAJC5Q9H3Z4 198 aa28.14■■■□□ 2.1
CYTH3-210ENST00000491641 PRDM2Q13029 1718 aa28.13■■■□□ 2.09
CYTH3-210ENST00000491641 URB2Q14146 1524 aaKnown RBP28.11■■■□□ 2.09
CYTH3-210ENST00000491641 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
CYTH3-210ENST00000491641 ABCC8Q09428 1581 aa27.82■■■□□ 2.04
CYTH3-210ENST00000491641 DNMBPQ6XZF7 1577 aa27.79■■■□□ 2.04
CYTH3-210ENST00000491641 IFT140Q96RY7 1462 aa27.74■■■□□ 2.03
CYTH3-210ENST00000491641 ZNF608Q9ULD9 1512 aaPredicted RBP27.69■■■□□ 2.02
CYTH3-210ENST00000491641 POLA1P09884 1462 aaPredicted RBP27.63■■■□□ 2.01
CYTH3-210ENST00000491641 CUX1P39880 1505 aa27.6■■■□□ 2.01
CYTH3-210ENST00000491641 TARBP1Q13395 1621 aaKnown RBP27.58■■■□□ 2.01
CYTH3-210ENST00000491641 RAD54L2Q9Y4B4 1467 aa27.57■■■□□ 2
CYTH3-210ENST00000491641 SOGA1O94964 1423 aa27.55■■■□□ 2
CYTH3-210ENST00000491641 AQRO60306 1485 aaKnown RBP eCLIP27.53■■■□□ 2
CYTH3-210ENST00000491641 FGD5Q6ZNL6 1462 aa27.53■■■□□ 2
CYTH3-210ENST00000491641 OSCARQ8IYS5 282 aa27.5■■□□□ 1.99
CYTH3-210ENST00000491641 EIF4G3O43432 1585 aaKnown RBP27.49■■□□□ 1.99
CYTH3-210ENST00000491641 TDRD9Q8NDG6 1382 aaKnown RBP27.46■■□□□ 1.99
CYTH3-210ENST00000491641 WRNQ14191 1432 aaPredicted RBP eCLIP27.33■■□□□ 1.96
CYTH3-210ENST00000491641 FBLN2P98095 1184 aa27.27■■□□□ 1.96
CYTH3-210ENST00000491641 SYNJ1O43426 1573 aa27.26■■□□□ 1.96
CYTH3-210ENST00000491641 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
CYTH3-210ENST00000491641 TOP2BQ02880 1626 aa27.26■■□□□ 1.95
CYTH3-210ENST00000491641 BIVM-ERCC5R4GMW8 1640 aa27.24■■□□□ 1.95
CYTH3-210ENST00000491641 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
CYTH3-210ENST00000491641 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
CYTH3-210ENST00000491641 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
CYTH3-210ENST00000491641 CHD1O14646 1710 aa27.2■■□□□ 1.94
CYTH3-210ENST00000491641 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
CYTH3-210ENST00000491641 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
CYTH3-210ENST00000491641 MAGI1Q96QZ7 1491 aaPredicted RBP27.13■■□□□ 1.93
CYTH3-210ENST00000491641 TRIM41Q8WV44 630 aa27.13■■□□□ 1.93
CYTH3-210ENST00000491641 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
CYTH3-210ENST00000491641 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
CYTH3-210ENST00000491641 SYNJ2O15056 1496 aa27.05■■□□□ 1.92
CYTH3-210ENST00000491641 RIMBP3CA6NJZ7 1639 aa27.02■■□□□ 1.92
CYTH3-210ENST00000491641 RIMBP3BA6NNM3 1639 aa27.02■■□□□ 1.92
CYTH3-210ENST00000491641 RIMBP3Q9UFD9 1639 aa27.02■■□□□ 1.92
CYTH3-210ENST00000491641 ARHGEF11O15085 1522 aa26.99■■□□□ 1.91
CYTH3-210ENST00000491641 CLASP1Q7Z460 1538 aa26.9■■□□□ 1.9
CYTH3-210ENST00000491641 ERICH3Q5RHP9 1530 aa26.89■■□□□ 1.89
CYTH3-210ENST00000491641 ADAMTS12P58397 1594 aa26.87■■□□□ 1.89
CYTH3-210ENST00000491641 FHAD1B1AJZ9 1412 aa26.86■■□□□ 1.89
CYTH3-210ENST00000491641 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
CYTH3-210ENST00000491641 CYB5RLQ6IPT4 315 aa26.85■■□□□ 1.89
CYTH3-210ENST00000491641 ARAP1Q96P48 1450 aa26.77■■□□□ 1.88
CYTH3-210ENST00000491641 KIF27Q86VH2 1401 aa26.77■■□□□ 1.88
CYTH3-210ENST00000491641 NUP160Q12769 1436 aa26.75■■□□□ 1.87
CYTH3-210ENST00000491641 IGF1RP08069 1367 aa26.75■■□□□ 1.87
CYTH3-210ENST00000491641 CEP170Q5SW79 1584 aa26.74■■□□□ 1.87
CYTH3-210ENST00000491641 ERCC6L2Q5T890 1561 aa26.58■■□□□ 1.85
CYTH3-210ENST00000491641 CARMIL1Q5VZK9 1371 aa26.58■■□□□ 1.84
CYTH3-210ENST00000491641 RUSC2Q8N2Y8 1516 aa26.56■■□□□ 1.84
CYTH3-210ENST00000491641 JPH4Q96JJ6 628 aa26.56■■□□□ 1.84
CYTH3-210ENST00000491641 CUL7Q14999 1698 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms