RNA–Protein interactions for RNA: ENST00000491438.2

CNTNAP3B-210, Transcript of contactin associated protein like 3B, humanhuman

TSL 2

Gene CNTNAP3B, Length 438 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-210ENST00000491438 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
CNTNAP3B-210ENST00000491438 CCDC180Q9P1Z9 1646 aa20.32■□□□□ 0.84
CNTNAP3B-210ENST00000491438 ABCC9O60706 1549 aa19.63■□□□□ 0.73
CNTNAP3B-210ENST00000491438 ZCCHC6Q5VYS8 1495 aaKnown RBP19.11■□□□□ 0.65
CNTNAP3B-210ENST00000491438 NACADO15069 1562 aa19.06■□□□□ 0.64
CNTNAP3B-210ENST00000491438 MYO15BQ96JP2 1530 aa19.04■□□□□ 0.64
CNTNAP3B-210ENST00000491438 RB1CC1Q8TDY2 1594 aa19.03■□□□□ 0.64
CNTNAP3B-210ENST00000491438 DCAF1Q9Y4B6 1507 aa19■□□□□ 0.63
CNTNAP3B-210ENST00000491438 DCAF8L2P0C7V8 631 aa18.95■□□□□ 0.62
CNTNAP3B-210ENST00000491438 CHIC1Q5VXU3 224 aa18.69■□□□□ 0.58
CNTNAP3B-210ENST00000491438 UNC13AQ9UPW8 1703 aa18.55■□□□□ 0.56
CNTNAP3B-210ENST00000491438 SCRIBQ14160 1630 aa18.49■□□□□ 0.55
CNTNAP3B-210ENST00000491438 BICRAQ9NZM4 1560 aa18.39■□□□□ 0.53
CNTNAP3B-210ENST00000491438 AEBP2Q6ZN18 517 aaPredicted RBP18.37■□□□□ 0.53
CNTNAP3B-210ENST00000491438 SHROOM4Q9ULL8 1493 aa18.34■□□□□ 0.53
CNTNAP3B-210ENST00000491438 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.52
CNTNAP3B-210ENST00000491438 EIF4G1Q04637 1599 aaKnown RBP17.92■□□□□ 0.46
CNTNAP3B-210ENST00000491438 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
CNTNAP3B-210ENST00000491438 CC2D2AQ9P2K1 1620 aa17.8■□□□□ 0.44
CNTNAP3B-210ENST00000491438 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
CNTNAP3B-210ENST00000491438 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
CNTNAP3B-210ENST00000491438 SMARCA4P51532 1647 aa17.72■□□□□ 0.43
CNTNAP3B-210ENST00000491438 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
CNTNAP3B-210ENST00000491438 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
CNTNAP3B-210ENST00000491438 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.41
CNTNAP3B-210ENST00000491438 ATAD2BQ9ULI0 1458 aa17.58■□□□□ 0.41
CNTNAP3B-210ENST00000491438 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
CNTNAP3B-210ENST00000491438 HMGXB3Q12766 1538 aa17.52■□□□□ 0.4
CNTNAP3B-210ENST00000491438 RSF1Q96T23 1441 aaPredicted RBP17.47■□□□□ 0.39
CNTNAP3B-210ENST00000491438 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
CNTNAP3B-210ENST00000491438 WIZO95785 1651 aa17.42■□□□□ 0.38
CNTNAP3B-210ENST00000491438 TOP2AP11388 1531 aaKnown RBP17.3■□□□□ 0.36
CNTNAP3B-210ENST00000491438 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
CNTNAP3B-210ENST00000491438 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
CNTNAP3B-210ENST00000491438 CCDC88BA6NC98 1476 aa17.05■□□□□ 0.32
CNTNAP3B-210ENST00000491438 CADPSQ9ULU8 1353 aa17.04■□□□□ 0.32
CNTNAP3B-210ENST00000491438 NESP48681 1621 aa17.02■□□□□ 0.31
CNTNAP3B-210ENST00000491438 CFTRP13569 1480 aa16.99■□□□□ 0.31
CNTNAP3B-210ENST00000491438 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.3
CNTNAP3B-210ENST00000491438 ERCC6Q03468 1493 aa16.95■□□□□ 0.3
CNTNAP3B-210ENST00000491438 PRDM2Q13029 1718 aa16.91■□□□□ 0.3
CNTNAP3B-210ENST00000491438 KIF21AQ7Z4S6 1674 aa16.86■□□□□ 0.29
CNTNAP3B-210ENST00000491438 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
CNTNAP3B-210ENST00000491438 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
CNTNAP3B-210ENST00000491438 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
CNTNAP3B-210ENST00000491438 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
CNTNAP3B-210ENST00000491438 CUX2O14529 1486 aa16.74■□□□□ 0.27
CNTNAP3B-210ENST00000491438 WDR62O43379 1518 aa16.72■□□□□ 0.27
CNTNAP3B-210ENST00000491438 ABCC8Q09428 1581 aa16.65■□□□□ 0.26
CNTNAP3B-210ENST00000491438 URB2Q14146 1524 aaKnown RBP16.65■□□□□ 0.26
CNTNAP3B-210ENST00000491438 DNMBPQ6XZF7 1577 aa16.62■□□□□ 0.25
CNTNAP3B-210ENST00000491438 TOPBP1Q92547 1522 aa16.6■□□□□ 0.25
CNTNAP3B-210ENST00000491438 CUX1P39880 1505 aa16.51■□□□□ 0.23
CNTNAP3B-210ENST00000491438 WRNQ14191 1432 aaPredicted RBP eCLIP16.49■□□□□ 0.23
CNTNAP3B-210ENST00000491438 IFT140Q96RY7 1462 aa16.48■□□□□ 0.23
CNTNAP3B-210ENST00000491438 POLA1P09884 1462 aaPredicted RBP16.47■□□□□ 0.23
CNTNAP3B-210ENST00000491438 FGD5Q6ZNL6 1462 aa16.45■□□□□ 0.22
CNTNAP3B-210ENST00000491438 TOP2BQ02880 1626 aa16.45■□□□□ 0.22
CNTNAP3B-210ENST00000491438 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
CNTNAP3B-210ENST00000491438 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP3B-210ENST00000491438 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
CNTNAP3B-210ENST00000491438 TARBP1Q13395 1621 aaKnown RBP16.4■□□□□ 0.22
CNTNAP3B-210ENST00000491438 SOGA1O94964 1423 aa16.38■□□□□ 0.21
CNTNAP3B-210ENST00000491438 WDR97A6NE52 1622 aa16.36■□□□□ 0.21
CNTNAP3B-210ENST00000491438 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
CNTNAP3B-210ENST00000491438 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.2
CNTNAP3B-210ENST00000491438 ABCA10Q8WWZ4 1543 aa16.32■□□□□ 0.2
CNTNAP3B-210ENST00000491438 EIF4G3O43432 1585 aaKnown RBP16.31■□□□□ 0.2
CNTNAP3B-210ENST00000491438 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.19
CNTNAP3B-210ENST00000491438 TDRD9Q8NDG6 1382 aaKnown RBP16.25■□□□□ 0.19
CNTNAP3B-210ENST00000491438 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
CNTNAP3B-210ENST00000491438 GAPVD1Q14C86 1478 aa16.22■□□□□ 0.19
CNTNAP3B-210ENST00000491438 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
CNTNAP3B-210ENST00000491438 TRIM41Q8WV44 630 aa16.18■□□□□ 0.18
CNTNAP3B-210ENST00000491438 PBRM1Q86U86 1689 aa16.18■□□□□ 0.18
CNTNAP3B-210ENST00000491438 MAGI1Q96QZ7 1491 aaPredicted RBP16.17■□□□□ 0.18
CNTNAP3B-210ENST00000491438 KIF27Q86VH2 1401 aa16.15■□□□□ 0.18
CNTNAP3B-210ENST00000491438 ERICH3Q5RHP9 1530 aa16.14■□□□□ 0.18
CNTNAP3B-210ENST00000491438 SNAPC4Q5SXM2 1469 aa16.14■□□□□ 0.17
CNTNAP3B-210ENST00000491438 SYNJ2O15056 1496 aa16.09■□□□□ 0.17
CNTNAP3B-210ENST00000491438 ADAMTS12P58397 1594 aa16.08■□□□□ 0.16
CNTNAP3B-210ENST00000491438 CHD1O14646 1710 aa16.06■□□□□ 0.16
CNTNAP3B-210ENST00000491438 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
CNTNAP3B-210ENST00000491438 CUL7Q14999 1698 aa16.04■□□□□ 0.16
CNTNAP3B-210ENST00000491438 OSCARQ8IYS5 282 aa16.03■□□□□ 0.16
CNTNAP3B-210ENST00000491438 CHMP7Q8WUX9 453 aaPredicted RBP16.03■□□□□ 0.16
CNTNAP3B-210ENST00000491438 IGF1RP08069 1367 aa16.02■□□□□ 0.16
CNTNAP3B-210ENST00000491438 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CNTNAP3B-210ENST00000491438 GRIN2AQ12879 1464 aa15.99■□□□□ 0.15
CNTNAP3B-210ENST00000491438 EEA1Q15075 1411 aa15.99■□□□□ 0.15
CNTNAP3B-210ENST00000491438 DNAJC5Q9H3Z4 198 aa15.97■□□□□ 0.15
CNTNAP3B-210ENST00000491438 RUSC2Q8N2Y8 1516 aa15.96■□□□□ 0.15
CNTNAP3B-210ENST00000491438 CARMIL1Q5VZK9 1371 aa15.94■□□□□ 0.14
CNTNAP3B-210ENST00000491438 NUP160Q12769 1436 aa15.93■□□□□ 0.14
CNTNAP3B-210ENST00000491438 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
CNTNAP3B-210ENST00000491438 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
CNTNAP3B-210ENST00000491438 CEP170Q5SW79 1584 aa15.88■□□□□ 0.13
CNTNAP3B-210ENST00000491438 PRXQ9BXM0 1461 aa15.87■□□□□ 0.13
CNTNAP3B-210ENST00000491438 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
CNTNAP3B-210ENST00000491438 KIAA0586Q9BVV6 1533 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms