RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 NISCHQ9Y2I1 1504 aa51.58■■■■■ 5.85
NOTCH4-205ENST00000491215 CCDC180Q9P1Z9 1646 aa45.59■■■■■ 4.89
NOTCH4-205ENST00000491215 ABCC9O60706 1549 aa44.08■■■■■ 4.65
NOTCH4-205ENST00000491215 ZCCHC6Q5VYS8 1495 aaKnown RBP43.09■■■■■ 4.49
NOTCH4-205ENST00000491215 DCAF8L2P0C7V8 631 aa42.97■■■■■ 4.47
NOTCH4-205ENST00000491215 NACADO15069 1562 aa42.7■■■■■ 4.43
NOTCH4-205ENST00000491215 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
NOTCH4-205ENST00000491215 RB1CC1Q8TDY2 1594 aa42.63■■■■■ 4.42
NOTCH4-205ENST00000491215 MYO15BQ96JP2 1530 aa42.6■■■■■ 4.41
NOTCH4-205ENST00000491215 SCRIBQ14160 1630 aa41.73■■■■■ 4.27
NOTCH4-205ENST00000491215 UNC13AQ9UPW8 1703 aa41.7■■■■■ 4.27
NOTCH4-205ENST00000491215 PABPN1Q86U42 306 aaKnown RBP eCLIP41.29■■■■■ 4.2
NOTCH4-205ENST00000491215 BICRAQ9NZM4 1560 aa41.29■■■■■ 4.2
NOTCH4-205ENST00000491215 SHROOM4Q9ULL8 1493 aa41.23■■■■■ 4.19
NOTCH4-205ENST00000491215 EIF4G1Q04637 1599 aaKnown RBP40.19■■■■■ 4.02
NOTCH4-205ENST00000491215 CECR2Q9BXF3 1484 aa40.12■■■■■ 4.01
NOTCH4-205ENST00000491215 BAZ1AQ9NRL2 1556 aaPredicted RBP39.96■■■■□ 3.99
NOTCH4-205ENST00000491215 SMARCA4P51532 1647 aa39.92■■■■□ 3.98
NOTCH4-205ENST00000491215 CC2D2AQ9P2K1 1620 aa39.88■■■■□ 3.97
NOTCH4-205ENST00000491215 DNAJC5BQ9UF47 199 aa39.83■■■■□ 3.97
NOTCH4-205ENST00000491215 MROH2BQ7Z745 1585 aa39.78■■■■□ 3.96
NOTCH4-205ENST00000491215 RSF1Q96T23 1441 aaPredicted RBP39.53■■■■□ 3.92
NOTCH4-205ENST00000491215 SMARCA2P51531 1590 aa39.51■■■■□ 3.92
NOTCH4-205ENST00000491215 ATAD2BQ9ULI0 1458 aa39.51■■■■□ 3.92
NOTCH4-205ENST00000491215 PEG3Q9GZU2 1588 aa39.47■■■■□ 3.91
NOTCH4-205ENST00000491215 WIZO95785 1651 aa39.41■■■■□ 3.9
NOTCH4-205ENST00000491215 NCAPD3P42695 1498 aa39.37■■■■□ 3.89
NOTCH4-205ENST00000491215 BAZ1BQ9UIG0 1483 aaKnown RBP39.27■■■■□ 3.88
NOTCH4-205ENST00000491215 HMGXB3Q12766 1538 aa39.27■■■■□ 3.88
NOTCH4-205ENST00000491215 SUPT5HO00267 1087 aaKnown RBP39.1■■■■□ 3.85
NOTCH4-205ENST00000491215 TOP2AP11388 1531 aaKnown RBP39■■■■□ 3.83
NOTCH4-205ENST00000491215 CCDC88BA6NC98 1476 aa38.54■■■■□ 3.76
NOTCH4-205ENST00000491215 NESP48681 1621 aa38.31■■■■□ 3.72
NOTCH4-205ENST00000491215 CADPSQ9ULU8 1353 aa38.29■■■■□ 3.72
NOTCH4-205ENST00000491215 LAMC3Q9Y6N6 1575 aa38.28■■■■□ 3.72
NOTCH4-205ENST00000491215 CFTRP13569 1480 aa38.18■■■■□ 3.7
NOTCH4-205ENST00000491215 PDS5BQ9NTI5 1447 aa38.01■■■■□ 3.67
NOTCH4-205ENST00000491215 PRDM2Q13029 1718 aa38■■■■□ 3.67
NOTCH4-205ENST00000491215 ERCC6Q03468 1493 aa37.97■■■■□ 3.67
NOTCH4-205ENST00000491215 KIF21AQ7Z4S6 1674 aa37.9■■■■□ 3.66
NOTCH4-205ENST00000491215 FANCD2Q9BXW9 1451 aa37.88■■■■□ 3.65
NOTCH4-205ENST00000491215 CEP164Q9UPV0 1460 aa37.78■■■■□ 3.64
NOTCH4-205ENST00000491215 MRC2Q9UBG0 1479 aa37.58■■■■□ 3.61
NOTCH4-205ENST00000491215 THOC2Q8NI27 1593 aaKnown RBP37.58■■■■□ 3.61
NOTCH4-205ENST00000491215 URB2Q14146 1524 aaKnown RBP37.45■■■■□ 3.59
NOTCH4-205ENST00000491215 WDR62O43379 1518 aa37.42■■■■□ 3.58
NOTCH4-205ENST00000491215 ABCC8Q09428 1581 aa37.37■■■■□ 3.57
NOTCH4-205ENST00000491215 DNMBPQ6XZF7 1577 aa37.35■■■■□ 3.57
NOTCH4-205ENST00000491215 TOPBP1Q92547 1522 aa37.33■■■■□ 3.57
NOTCH4-205ENST00000491215 WRNQ14191 1432 aaPredicted RBP eCLIP37.29■■■■□ 3.56
NOTCH4-205ENST00000491215 CUX1P39880 1505 aa37.29■■■■□ 3.56
NOTCH4-205ENST00000491215 CUX2O14529 1486 aa37.26■■■■□ 3.55
NOTCH4-205ENST00000491215 SYNJ1O43426 1573 aa37.17■■■■□ 3.54
NOTCH4-205ENST00000491215 TOP2BQ02880 1626 aa37.13■■■■□ 3.54
NOTCH4-205ENST00000491215 BIVM-ERCC5R4GMW8 1640 aa37.12■■■■□ 3.53
NOTCH4-205ENST00000491215 FGD5Q6ZNL6 1462 aa37.08■■■■□ 3.53
NOTCH4-205ENST00000491215 POLA1P09884 1462 aaPredicted RBP37.07■■■■□ 3.52
NOTCH4-205ENST00000491215 IFT140Q96RY7 1462 aa36.94■■■■□ 3.5
NOTCH4-205ENST00000491215 SOGA1O94964 1423 aa36.92■■■■□ 3.5
NOTCH4-205ENST00000491215 RAD54L2Q9Y4B4 1467 aa36.91■■■■□ 3.5
NOTCH4-205ENST00000491215 TARBP1Q13395 1621 aaKnown RBP36.87■■■■□ 3.49
NOTCH4-205ENST00000491215 TRIM41Q8WV44 630 aa36.87■■■■□ 3.49
NOTCH4-205ENST00000491215 CHIC1Q5VXU3 224 aa36.77■■■■□ 3.48
NOTCH4-205ENST00000491215 ZNF608Q9ULD9 1512 aaPredicted RBP36.74■■■■□ 3.47
NOTCH4-205ENST00000491215 WDR97A6NE52 1622 aa36.73■■■■□ 3.47
NOTCH4-205ENST00000491215 ABCA10Q8WWZ4 1543 aa36.72■■■■□ 3.47
NOTCH4-205ENST00000491215 TDRD9Q8NDG6 1382 aaKnown RBP36.66■■■■□ 3.46
NOTCH4-205ENST00000491215 EIF4G3O43432 1585 aaKnown RBP36.65■■■■□ 3.46
NOTCH4-205ENST00000491215 AQRO60306 1485 aaKnown RBP eCLIP36.62■■■■□ 3.45
NOTCH4-205ENST00000491215 ABCA5Q8WWZ7 1642 aa36.53■■■■□ 3.44
NOTCH4-205ENST00000491215 GAPVD1Q14C86 1478 aa36.52■■■■□ 3.44
NOTCH4-205ENST00000491215 KIF27Q86VH2 1401 aa36.46■■■■□ 3.43
NOTCH4-205ENST00000491215 PBRM1Q86U86 1689 aa36.43■■■■□ 3.42
NOTCH4-205ENST00000491215 GRIN2BQ13224 1484 aa36.41■■■■□ 3.42
NOTCH4-205ENST00000491215 RUSC2Q8N2Y8 1516 aa36.32■■■■□ 3.4
NOTCH4-205ENST00000491215 SNAPC4Q5SXM2 1469 aa36.31■■■■□ 3.4
NOTCH4-205ENST00000491215 ERICH3Q5RHP9 1530 aa36.3■■■■□ 3.4
NOTCH4-205ENST00000491215 MAGI1Q96QZ7 1491 aaPredicted RBP36.25■■■■□ 3.39
NOTCH4-205ENST00000491215 IGF1RP08069 1367 aa36.2■■■■□ 3.38
NOTCH4-205ENST00000491215 EEA1Q15075 1411 aa36.15■■■■□ 3.38
NOTCH4-205ENST00000491215 ADAMTS12P58397 1594 aa36.15■■■■□ 3.38
NOTCH4-205ENST00000491215 FBLN2P98095 1184 aa36.13■■■■□ 3.37
NOTCH4-205ENST00000491215 FAM9AQ8IZU1 332 aaPredicted RBP36.13■■■■□ 3.37
NOTCH4-205ENST00000491215 CUL7Q14999 1698 aa36.12■■■■□ 3.37
NOTCH4-205ENST00000491215 SYNJ2O15056 1496 aa36.11■■■■□ 3.37
NOTCH4-205ENST00000491215 FHAD1B1AJZ9 1412 aa36.1■■■■□ 3.37
NOTCH4-205ENST00000491215 CHMP7Q8WUX9 453 aaPredicted RBP36.08■■■■□ 3.37
NOTCH4-205ENST00000491215 CHD1O14646 1710 aa36.08■■■■□ 3.37
NOTCH4-205ENST00000491215 CSRNP3Q8WYN3 585 aa36.02■■■■□ 3.36
NOTCH4-205ENST00000491215 CARMIL1Q5VZK9 1371 aa36.02■■■■□ 3.36
NOTCH4-205ENST00000491215 GRIN2AQ12879 1464 aa35.95■■■■□ 3.35
NOTCH4-205ENST00000491215 PRXQ9BXM0 1461 aa35.89■■■■□ 3.34
NOTCH4-205ENST00000491215 RAPGEF2Q9Y4G8 1499 aa35.89■■■■□ 3.34
NOTCH4-205ENST00000491215 OSCARQ8IYS5 282 aa35.86■■■■□ 3.33
NOTCH4-205ENST00000491215 CEP170Q5SW79 1584 aa35.75■■■■□ 3.31
NOTCH4-205ENST00000491215 KIF21BO75037 1637 aa35.75■■■■□ 3.31
NOTCH4-205ENST00000491215 NUP160Q12769 1436 aa35.73■■■■□ 3.31
NOTCH4-205ENST00000491215 EHMT2Q96KQ7 1210 aa35.68■■■■□ 3.3
NOTCH4-205ENST00000491215 CLASP1Q7Z460 1538 aa35.63■■■■□ 3.29
NOTCH4-205ENST00000491215 GOLGA3Q08378 1498 aa35.61■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms