RNA–Protein interactions for RNA: ENST00000490945.1

SERP1-206, Transcript of stress associated endoplasmic reticulum protein 1, humanhuman

TSL 1 (best)

Gene SERP1, Length 1,596 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERP1-206ENST00000490945 NISCHQ9Y2I1 1504 aa27.34■■□□□ 1.97
SERP1-206ENST00000490945 AEBP2Q6ZN18 517 aaPredicted RBP25.95■■□□□ 1.74
SERP1-206ENST00000490945 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
SERP1-206ENST00000490945 CCDC180Q9P1Z9 1646 aa24.24■■□□□ 1.47
SERP1-206ENST00000490945 ABCC9O60706 1549 aa23.74■■□□□ 1.39
SERP1-206ENST00000490945 DCAF8L2P0C7V8 631 aa22.84■■□□□ 1.25
SERP1-206ENST00000490945 RB1CC1Q8TDY2 1594 aa22.8■■□□□ 1.24
SERP1-206ENST00000490945 NACADO15069 1562 aa22.79■■□□□ 1.24
SERP1-206ENST00000490945 ZCCHC6Q5VYS8 1495 aaKnown RBP22.78■■□□□ 1.24
SERP1-206ENST00000490945 MYO15BQ96JP2 1530 aa22.65■■□□□ 1.22
SERP1-206ENST00000490945 DCAF1Q9Y4B6 1507 aa22.59■■□□□ 1.21
SERP1-206ENST00000490945 UNC13AQ9UPW8 1703 aa22.32■■□□□ 1.16
SERP1-206ENST00000490945 PABPN1Q86U42 306 aaKnown RBP eCLIP22.21■■□□□ 1.15
SERP1-206ENST00000490945 SENP3Q9H4L4 574 aaPredicted RBP22.21■■□□□ 1.15
SERP1-206ENST00000490945 SCRIBQ14160 1630 aa22.19■■□□□ 1.14
SERP1-206ENST00000490945 BICRAQ9NZM4 1560 aa22.16■■□□□ 1.14
SERP1-206ENST00000490945 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
SERP1-206ENST00000490945 PHF23Q9BUL5 403 aaPredicted RBP21.85■■□□□ 1.09
SERP1-206ENST00000490945 SHROOM4Q9ULL8 1493 aa21.85■■□□□ 1.09
SERP1-206ENST00000490945 EIF4G1Q04637 1599 aaKnown RBP21.55■■□□□ 1.04
SERP1-206ENST00000490945 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
SERP1-206ENST00000490945 CECR2Q9BXF3 1484 aa21.33■■□□□ 1
SERP1-206ENST00000490945 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
SERP1-206ENST00000490945 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
SERP1-206ENST00000490945 MROH2BQ7Z745 1585 aa21.1■□□□□ 0.97
SERP1-206ENST00000490945 ATAD2BQ9ULI0 1458 aa21.08■□□□□ 0.96
SERP1-206ENST00000490945 NCAPD3P42695 1498 aa21.03■□□□□ 0.96
SERP1-206ENST00000490945 SMARCA2P51531 1590 aa21.03■□□□□ 0.96
SERP1-206ENST00000490945 PEG3Q9GZU2 1588 aa20.97■□□□□ 0.95
SERP1-206ENST00000490945 HMGXB3Q12766 1538 aa20.93■□□□□ 0.94
SERP1-206ENST00000490945 BAZ1BQ9UIG0 1483 aaKnown RBP20.9■□□□□ 0.94
SERP1-206ENST00000490945 WIZO95785 1651 aa20.87■□□□□ 0.93
SERP1-206ENST00000490945 RSF1Q96T23 1441 aaPredicted RBP20.86■□□□□ 0.93
SERP1-206ENST00000490945 FOXD1Q16676 465 aa20.72■□□□□ 0.91
SERP1-206ENST00000490945 TOP2AP11388 1531 aaKnown RBP20.62■□□□□ 0.89
SERP1-206ENST00000490945 NESP48681 1621 aa20.57■□□□□ 0.88
SERP1-206ENST00000490945 DNAJC5Q9H3Z4 198 aa20.56■□□□□ 0.88
SERP1-206ENST00000490945 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
SERP1-206ENST00000490945 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
SERP1-206ENST00000490945 ERCC6Q03468 1493 aa20.43■□□□□ 0.86
SERP1-206ENST00000490945 CCDC88BA6NC98 1476 aa20.4■□□□□ 0.86
SERP1-206ENST00000490945 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.85
SERP1-206ENST00000490945 CFTRP13569 1480 aa20.33■□□□□ 0.84
SERP1-206ENST00000490945 PDS5BQ9NTI5 1447 aa20.32■□□□□ 0.84
SERP1-206ENST00000490945 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
SERP1-206ENST00000490945 CUX2O14529 1486 aa20.26■□□□□ 0.83
SERP1-206ENST00000490945 THOC2Q8NI27 1593 aaKnown RBP20.22■□□□□ 0.83
SERP1-206ENST00000490945 FANCD2Q9BXW9 1451 aa20.22■□□□□ 0.83
SERP1-206ENST00000490945 CEP164Q9UPV0 1460 aa20.17■□□□□ 0.82
SERP1-206ENST00000490945 PRDM2Q13029 1718 aa20.16■□□□□ 0.82
SERP1-206ENST00000490945 MRC2Q9UBG0 1479 aa20.14■□□□□ 0.81
SERP1-206ENST00000490945 WDR62O43379 1518 aa20.07■□□□□ 0.8
SERP1-206ENST00000490945 URB2Q14146 1524 aaKnown RBP20.02■□□□□ 0.8
SERP1-206ENST00000490945 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
SERP1-206ENST00000490945 TOPBP1Q92547 1522 aa19.9■□□□□ 0.78
SERP1-206ENST00000490945 DNMBPQ6XZF7 1577 aa19.86■□□□□ 0.77
SERP1-206ENST00000490945 ABCC8Q09428 1581 aa19.84■□□□□ 0.77
SERP1-206ENST00000490945 CUX1P39880 1505 aa19.78■□□□□ 0.76
SERP1-206ENST00000490945 POLA1P09884 1462 aaPredicted RBP19.73■□□□□ 0.75
SERP1-206ENST00000490945 IFT140Q96RY7 1462 aa19.73■□□□□ 0.75
SERP1-206ENST00000490945 FGD5Q6ZNL6 1462 aa19.7■□□□□ 0.74
SERP1-206ENST00000490945 ZNF608Q9ULD9 1512 aaPredicted RBP19.69■□□□□ 0.74
SERP1-206ENST00000490945 TARBP1Q13395 1621 aaKnown RBP19.67■□□□□ 0.74
SERP1-206ENST00000490945 RAD54L2Q9Y4B4 1467 aa19.67■□□□□ 0.74
SERP1-206ENST00000490945 WRNQ14191 1432 aaPredicted RBP eCLIP19.66■□□□□ 0.74
SERP1-206ENST00000490945 SOGA1O94964 1423 aa19.65■□□□□ 0.74
SERP1-206ENST00000490945 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
SERP1-206ENST00000490945 TOP2BQ02880 1626 aa19.6■□□□□ 0.73
SERP1-206ENST00000490945 BIVM-ERCC5R4GMW8 1640 aa19.59■□□□□ 0.73
SERP1-206ENST00000490945 EIF4G3O43432 1585 aaKnown RBP19.59■□□□□ 0.73
SERP1-206ENST00000490945 AQRO60306 1485 aaKnown RBP eCLIP19.58■□□□□ 0.72
SERP1-206ENST00000490945 MSH5O43196 834 aa19.55■□□□□ 0.72
SERP1-206ENST00000490945 TDRD9Q8NDG6 1382 aaKnown RBP19.55■□□□□ 0.72
SERP1-206ENST00000490945 WDR97A6NE52 1622 aa19.53■□□□□ 0.72
SERP1-206ENST00000490945 ABCA10Q8WWZ4 1543 aa19.49■□□□□ 0.71
SERP1-206ENST00000490945 TRIM41Q8WV44 630 aa19.43■□□□□ 0.7
SERP1-206ENST00000490945 GAPVD1Q14C86 1478 aa19.42■□□□□ 0.7
SERP1-206ENST00000490945 ABCA5Q8WWZ7 1642 aa19.42■□□□□ 0.7
SERP1-206ENST00000490945 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
SERP1-206ENST00000490945 SNAPC4Q5SXM2 1469 aa19.39■□□□□ 0.69
SERP1-206ENST00000490945 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
SERP1-206ENST00000490945 OSCARQ8IYS5 282 aa19.35■□□□□ 0.69
SERP1-206ENST00000490945 CHD1O14646 1710 aa19.34■□□□□ 0.69
SERP1-206ENST00000490945 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.69
SERP1-206ENST00000490945 FBLN2P98095 1184 aa19.32■□□□□ 0.68
SERP1-206ENST00000490945 PIAS4Q8N2W9 510 aaPredicted RBP19.27■□□□□ 0.68
SERP1-206ENST00000490945 SYNJ2O15056 1496 aa19.27■□□□□ 0.68
SERP1-206ENST00000490945 PLPPR3Q6T4P5 718 aa19.27■□□□□ 0.67
SERP1-206ENST00000490945 CHMP7Q8WUX9 453 aaPredicted RBP19.26■□□□□ 0.67
SERP1-206ENST00000490945 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
SERP1-206ENST00000490945 ADAMTS12P58397 1594 aa19.23■□□□□ 0.67
SERP1-206ENST00000490945 KIF27Q86VH2 1401 aa19.22■□□□□ 0.67
SERP1-206ENST00000490945 FHAD1B1AJZ9 1412 aa19.19■□□□□ 0.66
SERP1-206ENST00000490945 IGF1RP08069 1367 aa19.16■□□□□ 0.66
SERP1-206ENST00000490945 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
SERP1-206ENST00000490945 CLASP1Q7Z460 1538 aa19.13■□□□□ 0.65
SERP1-206ENST00000490945 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
SERP1-206ENST00000490945 PPP6R1Q9UPN7 881 aa19.1■□□□□ 0.65
SERP1-206ENST00000490945 CUL7Q14999 1698 aa19.08■□□□□ 0.65
SERP1-206ENST00000490945 CEP170Q5SW79 1584 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms