RNA–Protein interactions for RNA: ENST00000490787.1

PDCD11-205, Transcript of programmed cell death 11, humanhuman

Gene PDCD11, Length 101 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-205ENST00000490787 NISCHQ9Y2I1 1504 aa9.48□□□□□ -0.89
PDCD11-205ENST00000490787 ABCC9O60706 1549 aa8.87□□□□□ -0.99
PDCD11-205ENST00000490787 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
PDCD11-205ENST00000490787 CCDC180Q9P1Z9 1646 aa8.5□□□□□ -1.05
PDCD11-205ENST00000490787 PABPN1Q86U42 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
PDCD11-205ENST00000490787 RB1CC1Q8TDY2 1594 aa8.23□□□□□ -1.09
PDCD11-205ENST00000490787 DCAF8L2P0C7V8 631 aa8.22□□□□□ -1.09
PDCD11-205ENST00000490787 NACADO15069 1562 aa8.13□□□□□ -1.11
PDCD11-205ENST00000490787 UNC13AQ9UPW8 1703 aa8.08□□□□□ -1.12
PDCD11-205ENST00000490787 BICRAQ9NZM4 1560 aa8.07□□□□□ -1.12
PDCD11-205ENST00000490787 CECR2Q9BXF3 1484 aa7.98□□□□□ -1.13
PDCD11-205ENST00000490787 DNAJC5Q9H3Z4 198 aa7.97□□□□□ -1.13
PDCD11-205ENST00000490787 CC2D2AQ9P2K1 1620 aa7.96□□□□□ -1.14
PDCD11-205ENST00000490787 MYO15BQ96JP2 1530 aa7.9□□□□□ -1.14
PDCD11-205ENST00000490787 EIF4G1Q04637 1599 aaKnown RBP7.86□□□□□ -1.15
PDCD11-205ENST00000490787 SCRIBQ14160 1630 aa7.85□□□□□ -1.15
PDCD11-205ENST00000490787 ZCCHC6Q5VYS8 1495 aaKnown RBP7.8□□□□□ -1.16
PDCD11-205ENST00000490787 SHROOM4Q9ULL8 1493 aa7.8□□□□□ -1.16
PDCD11-205ENST00000490787 DCAF1Q9Y4B6 1507 aa7.74□□□□□ -1.17
PDCD11-205ENST00000490787 CUX2O14529 1486 aa7.63□□□□□ -1.19
PDCD11-205ENST00000490787 ERCC6Q03468 1493 aa7.62□□□□□ -1.19
PDCD11-205ENST00000490787 TRIM41Q8WV44 630 aa7.59□□□□□ -1.19
PDCD11-205ENST00000490787 NESP48681 1621 aa7.58□□□□□ -1.2
PDCD11-205ENST00000490787 NCAPD3P42695 1498 aa7.55□□□□□ -1.2
PDCD11-205ENST00000490787 ATAD2BQ9ULI0 1458 aa7.52□□□□□ -1.21
PDCD11-205ENST00000490787 THOC2Q8NI27 1593 aaKnown RBP7.46□□□□□ -1.22
PDCD11-205ENST00000490787 SMARCA2P51531 1590 aa7.44□□□□□ -1.22
PDCD11-205ENST00000490787 HMGXB3Q12766 1538 aa7.42□□□□□ -1.22
PDCD11-205ENST00000490787 SMARCA4P51532 1647 aa7.42□□□□□ -1.22
PDCD11-205ENST00000490787 BAZ1BQ9UIG0 1483 aaKnown RBP7.41□□□□□ -1.22
PDCD11-205ENST00000490787 KIF21AQ7Z4S6 1674 aa7.39□□□□□ -1.23
PDCD11-205ENST00000490787 LAMC3Q9Y6N6 1575 aa7.36□□□□□ -1.23
PDCD11-205ENST00000490787 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
PDCD11-205ENST00000490787 MROH2BQ7Z745 1585 aa7.35□□□□□ -1.23
PDCD11-205ENST00000490787 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
PDCD11-205ENST00000490787 CADPSQ9ULU8 1353 aa7.33□□□□□ -1.24
PDCD11-205ENST00000490787 MRC2Q9UBG0 1479 aa7.32□□□□□ -1.24
PDCD11-205ENST00000490787 OSCARQ8IYS5 282 aa7.32□□□□□ -1.24
PDCD11-205ENST00000490787 PEG3Q9GZU2 1588 aa7.32□□□□□ -1.24
PDCD11-205ENST00000490787 WDR62O43379 1518 aa7.29□□□□□ -1.24
PDCD11-205ENST00000490787 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
PDCD11-205ENST00000490787 CEP164Q9UPV0 1460 aa7.24□□□□□ -1.25
PDCD11-205ENST00000490787 WIZO95785 1651 aa7.24□□□□□ -1.25
PDCD11-205ENST00000490787 URB2Q14146 1524 aaKnown RBP7.22□□□□□ -1.25
PDCD11-205ENST00000490787 CYB5RLQ6IPT4 315 aa7.22□□□□□ -1.25
PDCD11-205ENST00000490787 RIMBP3CA6NJZ7 1639 aa7.22□□□□□ -1.25
PDCD11-205ENST00000490787 RIMBP3BA6NNM3 1639 aa7.22□□□□□ -1.25
PDCD11-205ENST00000490787 RIMBP3Q9UFD9 1639 aa7.22□□□□□ -1.25
PDCD11-205ENST00000490787 ZNF608Q9ULD9 1512 aaPredicted RBP7.2□□□□□ -1.26
PDCD11-205ENST00000490787 TRHP20396 242 aaPredicted RBP7.19□□□□□ -1.26
PDCD11-205ENST00000490787 CFTRP13569 1480 aa7.18□□□□□ -1.26
PDCD11-205ENST00000490787 ARHGEF11O15085 1522 aa7.18□□□□□ -1.26
PDCD11-205ENST00000490787 ARAP1Q96P48 1450 aa7.12□□□□□ -1.27
PDCD11-205ENST00000490787 RSF1Q96T23 1441 aaPredicted RBP7.12□□□□□ -1.27
PDCD11-205ENST00000490787 FBLN2P98095 1184 aa7.12□□□□□ -1.27
PDCD11-205ENST00000490787 AQRO60306 1485 aaKnown RBP eCLIP7.11□□□□□ -1.27
PDCD11-205ENST00000490787 AEBP2Q6ZN18 517 aaPredicted RBP7.1□□□□□ -1.27
PDCD11-205ENST00000490787 IFT140Q96RY7 1462 aa7.1□□□□□ -1.27
PDCD11-205ENST00000490787 TOPBP1Q92547 1522 aa7.09□□□□□ -1.27
PDCD11-205ENST00000490787 TOP2AP11388 1531 aaKnown RBP7.08□□□□□ -1.28
PDCD11-205ENST00000490787 CCDC88BA6NC98 1476 aa7.07□□□□□ -1.28
PDCD11-205ENST00000490787 EIF4G3O43432 1585 aaKnown RBP7.07□□□□□ -1.28
PDCD11-205ENST00000490787 CHD1O14646 1710 aa7.06□□□□□ -1.28
PDCD11-205ENST00000490787 TDRD9Q8NDG6 1382 aaKnown RBP7.04□□□□□ -1.28
PDCD11-205ENST00000490787 RAD54L2Q9Y4B4 1467 aa7.04□□□□□ -1.28
PDCD11-205ENST00000490787 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
PDCD11-205ENST00000490787 PRDM2Q13029 1718 aa7.01□□□□□ -1.29
PDCD11-205ENST00000490787 POLA1P09884 1462 aaPredicted RBP7□□□□□ -1.29
PDCD11-205ENST00000490787 DNMBPQ6XZF7 1577 aa6.99□□□□□ -1.29
PDCD11-205ENST00000490787 CHMP7Q8WUX9 453 aaPredicted RBP6.99□□□□□ -1.29
PDCD11-205ENST00000490787 SNAPC4Q5SXM2 1469 aa6.98□□□□□ -1.29
PDCD11-205ENST00000490787 SOGA1O94964 1423 aa6.98□□□□□ -1.29
PDCD11-205ENST00000490787 CLASP1Q7Z460 1538 aa6.97□□□□□ -1.29
PDCD11-205ENST00000490787 ABCC8Q09428 1581 aa6.97□□□□□ -1.29
PDCD11-205ENST00000490787 GAPVD1Q14C86 1478 aa6.93□□□□□ -1.3
PDCD11-205ENST00000490787 FGD5Q6ZNL6 1462 aa6.93□□□□□ -1.3
PDCD11-205ENST00000490787 ERCC6L2Q5T890 1561 aa6.93□□□□□ -1.3
PDCD11-205ENST00000490787 CUX1P39880 1505 aa6.91□□□□□ -1.3
PDCD11-205ENST00000490787 SYNJ1O43426 1573 aa6.91□□□□□ -1.3
PDCD11-205ENST00000490787 SYNJ2O15056 1496 aa6.91□□□□□ -1.3
PDCD11-205ENST00000490787 GRIN2BQ13224 1484 aa6.91□□□□□ -1.3
PDCD11-205ENST00000490787 MAGI1Q96QZ7 1491 aaPredicted RBP6.9□□□□□ -1.31
PDCD11-205ENST00000490787 ILDR1Q86SU0 546 aaPredicted RBP6.87□□□□□ -1.31
PDCD11-205ENST00000490787 KDM4FA0A1W2PPD8 638 aa6.86□□□□□ -1.31
PDCD11-205ENST00000490787 FAM69CQ0P6D2 419 aa6.84□□□□□ -1.31
PDCD11-205ENST00000490787 PBRM1Q86U86 1689 aa6.84□□□□□ -1.32
PDCD11-205ENST00000490787 CEP170Q5SW79 1584 aa6.83□□□□□ -1.32
PDCD11-205ENST00000490787 GRIN2AQ12879 1464 aa6.83□□□□□ -1.32
PDCD11-205ENST00000490787 WDR97A6NE52 1622 aa6.83□□□□□ -1.32
PDCD11-205ENST00000490787 KIF13AQ9H1H9 1805 aa6.82□□□□□ -1.32
PDCD11-205ENST00000490787 ABCA10Q8WWZ4 1543 aa6.81□□□□□ -1.32
PDCD11-205ENST00000490787 ABCA5Q8WWZ7 1642 aa6.81□□□□□ -1.32
PDCD11-205ENST00000490787 NUP160Q12769 1436 aa6.81□□□□□ -1.32
PDCD11-205ENST00000490787 PRG4Q92954 1404 aaPredicted RBP6.8□□□□□ -1.32
PDCD11-205ENST00000490787 JPH4Q96JJ6 628 aa6.79□□□□□ -1.32
PDCD11-205ENST00000490787 ADAMTS12P58397 1594 aa6.78□□□□□ -1.32
PDCD11-205ENST00000490787 SHROOM2Q13796 1616 aa6.77□□□□□ -1.33
PDCD11-205ENST00000490787 ABCC10Q5T3U5 1492 aa6.77□□□□□ -1.33
PDCD11-205ENST00000490787 FHAD1B1AJZ9 1412 aa6.76□□□□□ -1.33
PDCD11-205ENST00000490787 WRNQ14191 1432 aaPredicted RBP eCLIP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms