RNA–Protein interactions for RNA: ENST00000490600.6

MCOLN3-206, Transcript of mucolipin 3, humanhuman

TSL 1 (best)

Gene MCOLN3, Length 2,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCOLN3-206ENST00000490600 NISCHQ9Y2I1 1504 aa30.01■■■□□ 2.39
MCOLN3-206ENST00000490600 CCDC180Q9P1Z9 1646 aa25.71■■□□□ 1.71
MCOLN3-206ENST00000490600 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
MCOLN3-206ENST00000490600 SHROOM4Q9ULL8 1493 aa25.26■■□□□ 1.63
MCOLN3-206ENST00000490600 DCAF8L2P0C7V8 631 aa24.88■■□□□ 1.57
MCOLN3-206ENST00000490600 DCAF1Q9Y4B6 1507 aa24.62■■□□□ 1.53
MCOLN3-206ENST00000490600 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
MCOLN3-206ENST00000490600 ABCC9O60706 1549 aa24.14■■□□□ 1.46
MCOLN3-206ENST00000490600 MYO15BQ96JP2 1530 aa24.05■■□□□ 1.44
MCOLN3-206ENST00000490600 SCRIBQ14160 1630 aa24.04■■□□□ 1.44
MCOLN3-206ENST00000490600 NACADO15069 1562 aa23.84■■□□□ 1.41
MCOLN3-206ENST00000490600 CHIC1Q5VXU3 224 aa23.69■■□□□ 1.38
MCOLN3-206ENST00000490600 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
MCOLN3-206ENST00000490600 RB1CC1Q8TDY2 1594 aa23.53■■□□□ 1.36
MCOLN3-206ENST00000490600 CECR2Q9BXF3 1484 aa23.46■■□□□ 1.35
MCOLN3-206ENST00000490600 MROH2BQ7Z745 1585 aa23.33■■□□□ 1.33
MCOLN3-206ENST00000490600 UNC13AQ9UPW8 1703 aa23.28■■□□□ 1.32
MCOLN3-206ENST00000490600 WIZO95785 1651 aa23.2■■□□□ 1.3
MCOLN3-206ENST00000490600 BAZ1AQ9NRL2 1556 aaPredicted RBP23.06■■□□□ 1.28
MCOLN3-206ENST00000490600 PABPN1Q86U42 306 aaKnown RBP eCLIP22.99■■□□□ 1.27
MCOLN3-206ENST00000490600 BICRAQ9NZM4 1560 aa22.99■■□□□ 1.27
MCOLN3-206ENST00000490600 LOC105371045A0A1W2PR82 267 aa22.98■■□□□ 1.27
MCOLN3-206ENST00000490600 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
MCOLN3-206ENST00000490600 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
MCOLN3-206ENST00000490600 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
MCOLN3-206ENST00000490600 EIF4G1Q04637 1599 aaKnown RBP22.75■■□□□ 1.23
MCOLN3-206ENST00000490600 CCDC88BA6NC98 1476 aa22.69■■□□□ 1.22
MCOLN3-206ENST00000490600 SMARCA2P51531 1590 aa22.68■■□□□ 1.22
MCOLN3-206ENST00000490600 FAM9AQ8IZU1 332 aaPredicted RBP22.68■■□□□ 1.22
MCOLN3-206ENST00000490600 PEG3Q9GZU2 1588 aa22.54■■□□□ 1.2
MCOLN3-206ENST00000490600 ABCC8Q09428 1581 aa22.52■■□□□ 1.2
MCOLN3-206ENST00000490600 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
MCOLN3-206ENST00000490600 PCGF6Q9BYE7 350 aa22.5■■□□□ 1.19
MCOLN3-206ENST00000490600 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
MCOLN3-206ENST00000490600 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
MCOLN3-206ENST00000490600 SOGA1O94964 1423 aa22.21■■□□□ 1.15
MCOLN3-206ENST00000490600 HRCP23327 699 aa22.21■■□□□ 1.15
MCOLN3-206ENST00000490600 RUSC2Q8N2Y8 1516 aa22.15■■□□□ 1.14
MCOLN3-206ENST00000490600 WRNQ14191 1432 aaPredicted RBP eCLIP22.14■■□□□ 1.13
MCOLN3-206ENST00000490600 TRIM26Q12899 539 aaPredicted RBP22.13■■□□□ 1.13
MCOLN3-206ENST00000490600 SYNJ1O43426 1573 aa22.12■■□□□ 1.13
MCOLN3-206ENST00000490600 NCAPD3P42695 1498 aa22.07■■□□□ 1.12
MCOLN3-206ENST00000490600 HMGXB3Q12766 1538 aa22.04■■□□□ 1.12
MCOLN3-206ENST00000490600 CSRNP3Q8WYN3 585 aa21.97■■□□□ 1.11
MCOLN3-206ENST00000490600 PPARGC1BQ86YN6 1023 aaKnown RBP21.96■■□□□ 1.11
MCOLN3-206ENST00000490600 EEA1Q15075 1411 aa21.94■■□□□ 1.1
MCOLN3-206ENST00000490600 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
MCOLN3-206ENST00000490600 TNIKQ9UKE5 1360 aa21.85■■□□□ 1.09
MCOLN3-206ENST00000490600 TOP2BQ02880 1626 aa21.85■■□□□ 1.09
MCOLN3-206ENST00000490600 UBTFP17480 764 aaKnown RBP21.82■■□□□ 1.08
MCOLN3-206ENST00000490600 GOLGA3Q08378 1498 aa21.81■■□□□ 1.08
MCOLN3-206ENST00000490600 BIVM-ERCC5R4GMW8 1640 aa21.79■■□□□ 1.08
MCOLN3-206ENST00000490600 CFTRP13569 1480 aa21.78■■□□□ 1.08
MCOLN3-206ENST00000490600 CC2D2AQ9P2K1 1620 aa21.77■■□□□ 1.08
MCOLN3-206ENST00000490600 CUX1P39880 1505 aa21.75■■□□□ 1.07
MCOLN3-206ENST00000490600 KIF21BO75037 1637 aa21.73■■□□□ 1.07
MCOLN3-206ENST00000490600 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
MCOLN3-206ENST00000490600 RAPGEF2Q9Y4G8 1499 aa21.69■■□□□ 1.06
MCOLN3-206ENST00000490600 TTBK1Q5TCY1 1321 aaPredicted RBP21.67■■□□□ 1.06
MCOLN3-206ENST00000490600 PRDM2Q13029 1718 aa21.63■■□□□ 1.05
MCOLN3-206ENST00000490600 CADPSQ9ULU8 1353 aa21.59■■□□□ 1.05
MCOLN3-206ENST00000490600 CLIP1P30622 1438 aa21.55■■□□□ 1.04
MCOLN3-206ENST00000490600 RANGAP1P46060 587 aaPredicted RBP21.53■■□□□ 1.04
MCOLN3-206ENST00000490600 PRXQ9BXM0 1461 aa21.51■■□□□ 1.03
MCOLN3-206ENST00000490600 KIF27Q86VH2 1401 aa21.46■■□□□ 1.03
MCOLN3-206ENST00000490600 ERICH3Q5RHP9 1530 aa21.45■■□□□ 1.02
MCOLN3-206ENST00000490600 NESP48681 1621 aa21.43■■□□□ 1.02
MCOLN3-206ENST00000490600 VPS8Q8N3P4 1428 aa21.41■■□□□ 1.02
MCOLN3-206ENST00000490600 FANCD2Q9BXW9 1451 aa21.4■■□□□ 1.02
MCOLN3-206ENST00000490600 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
MCOLN3-206ENST00000490600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.39■■□□□ 1.02
MCOLN3-206ENST00000490600 DNAJC5BQ9UF47 199 aa21.39■■□□□ 1.01
MCOLN3-206ENST00000490600 ZEB1P37275 1124 aaPredicted RBP21.38■■□□□ 1.01
MCOLN3-206ENST00000490600 CUX2O14529 1486 aa21.38■■□□□ 1.01
MCOLN3-206ENST00000490600 ARAP1Q96P48 1450 aa21.31■■□□□ 1
MCOLN3-206ENST00000490600 IGF1RP08069 1367 aa21.31■■□□□ 1
MCOLN3-206ENST00000490600 RAD54L2Q9Y4B4 1467 aa21.25■□□□□ 0.99
MCOLN3-206ENST00000490600 DNMBPQ6XZF7 1577 aa21.24■□□□□ 0.99
MCOLN3-206ENST00000490600 CCER1Q8TC90 406 aaPredicted RBP21.24■□□□□ 0.99
MCOLN3-206ENST00000490600 TOPBP1Q92547 1522 aa21.24■□□□□ 0.99
MCOLN3-206ENST00000490600 POLA1P09884 1462 aaPredicted RBP21.21■□□□□ 0.99
MCOLN3-206ENST00000490600 ARHGAP35Q9NRY4 1499 aa21.18■□□□□ 0.98
MCOLN3-206ENST00000490600 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
MCOLN3-206ENST00000490600 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
MCOLN3-206ENST00000490600 APLP2Q06481 763 aa21.17■□□□□ 0.98
MCOLN3-206ENST00000490600 URB2Q14146 1524 aaKnown RBP21.16■□□□□ 0.98
MCOLN3-206ENST00000490600 ABCA10Q8WWZ4 1543 aa21.13■□□□□ 0.97
MCOLN3-206ENST00000490600 HNRNPUL2Q1KMD3 747 aaKnown RBP21.12■□□□□ 0.97
MCOLN3-206ENST00000490600 KANK4Q5T7N3 995 aaPredicted RBP21.12■□□□□ 0.97
MCOLN3-206ENST00000490600 KIF21AQ7Z4S6 1674 aa21.07■□□□□ 0.96
MCOLN3-206ENST00000490600 WDR97A6NE52 1622 aa21.03■□□□□ 0.96
MCOLN3-206ENST00000490600 PDS5BQ9NTI5 1447 aa21.02■□□□□ 0.95
MCOLN3-206ENST00000490600 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
MCOLN3-206ENST00000490600 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
MCOLN3-206ENST00000490600 CUL7Q14999 1698 aa20.94■□□□□ 0.94
MCOLN3-206ENST00000490600 ABCA5Q8WWZ7 1642 aa20.94■□□□□ 0.94
MCOLN3-206ENST00000490600 GAPVD1Q14C86 1478 aa20.88■□□□□ 0.93
MCOLN3-206ENST00000490600 FHOD3Q2V2M9 1422 aa20.87■□□□□ 0.93
MCOLN3-206ENST00000490600 TARBP1Q13395 1621 aaKnown RBP20.87■□□□□ 0.93
MCOLN3-206ENST00000490600 TIAM1Q13009 1591 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms