RNA–Protein interactions for RNA: ENST00000490552.1

USP34-218, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 2

Gene USP34, Length 1,793 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-218ENST00000490552 NISCHQ9Y2I1 1504 aa21.64■■□□□ 1.05
USP34-218ENST00000490552 CCDC180Q9P1Z9 1646 aa18.98■□□□□ 0.63
USP34-218ENST00000490552 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
USP34-218ENST00000490552 DCAF1Q9Y4B6 1507 aa17.98■□□□□ 0.47
USP34-218ENST00000490552 ABCC9O60706 1549 aa17.94■□□□□ 0.46
USP34-218ENST00000490552 MYO15BQ96JP2 1530 aa17.85■□□□□ 0.45
USP34-218ENST00000490552 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
USP34-218ENST00000490552 NACADO15069 1562 aa17.72■□□□□ 0.43
USP34-218ENST00000490552 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.41
USP34-218ENST00000490552 SHROOM4Q9ULL8 1493 aa17.41■□□□□ 0.38
USP34-218ENST00000490552 SCRIBQ14160 1630 aa17.31■□□□□ 0.36
USP34-218ENST00000490552 UNC13AQ9UPW8 1703 aa17.09■□□□□ 0.33
USP34-218ENST00000490552 BICRAQ9NZM4 1560 aa16.96■□□□□ 0.3
USP34-218ENST00000490552 PABPN1Q86U42 306 aaKnown RBP eCLIP16.86■□□□□ 0.29
USP34-218ENST00000490552 BAZ1AQ9NRL2 1556 aaPredicted RBP16.76■□□□□ 0.27
USP34-218ENST00000490552 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
USP34-218ENST00000490552 SUPT5HO00267 1087 aaKnown RBP16.74■□□□□ 0.27
USP34-218ENST00000490552 RSF1Q96T23 1441 aaPredicted RBP16.71■□□□□ 0.27
USP34-218ENST00000490552 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
USP34-218ENST00000490552 SMARCA4P51532 1647 aa16.64■□□□□ 0.25
USP34-218ENST00000490552 PEG3Q9GZU2 1588 aa16.51■□□□□ 0.23
USP34-218ENST00000490552 EIF4G1Q04637 1599 aaKnown RBP16.5■□□□□ 0.23
USP34-218ENST00000490552 WIZO95785 1651 aa16.49■□□□□ 0.23
USP34-218ENST00000490552 SMARCA2P51531 1590 aa16.46■□□□□ 0.23
USP34-218ENST00000490552 ATAD2BQ9ULI0 1458 aa16.42■□□□□ 0.22
USP34-218ENST00000490552 TOP2AP11388 1531 aaKnown RBP16.4■□□□□ 0.22
USP34-218ENST00000490552 NCAPD3P42695 1498 aa16.34■□□□□ 0.21
USP34-218ENST00000490552 BAZ1BQ9UIG0 1483 aaKnown RBP16.33■□□□□ 0.2
USP34-218ENST00000490552 HMGXB3Q12766 1538 aa16.32■□□□□ 0.2
USP34-218ENST00000490552 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
USP34-218ENST00000490552 CCDC88BA6NC98 1476 aa16.19■□□□□ 0.18
USP34-218ENST00000490552 CHIC1Q5VXU3 224 aa15.99■□□□□ 0.15
USP34-218ENST00000490552 CFTRP13569 1480 aa15.93■□□□□ 0.14
USP34-218ENST00000490552 CADPSQ9ULU8 1353 aa15.9■□□□□ 0.14
USP34-218ENST00000490552 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
USP34-218ENST00000490552 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
USP34-218ENST00000490552 PRDM2Q13029 1718 aa15.81■□□□□ 0.12
USP34-218ENST00000490552 LAMC3Q9Y6N6 1575 aa15.81■□□□□ 0.12
USP34-218ENST00000490552 AEBP2Q6ZN18 517 aaPredicted RBP15.8■□□□□ 0.12
USP34-218ENST00000490552 WRNQ14191 1432 aaPredicted RBP eCLIP15.77■□□□□ 0.11
USP34-218ENST00000490552 ABCC8Q09428 1581 aa15.75■□□□□ 0.11
USP34-218ENST00000490552 PDS5BQ9NTI5 1447 aa15.71■□□□□ 0.11
USP34-218ENST00000490552 FANCD2Q9BXW9 1451 aa15.7■□□□□ 0.1
USP34-218ENST00000490552 NESP48681 1621 aa15.68■□□□□ 0.1
USP34-218ENST00000490552 TOP2BQ02880 1626 aa15.65■□□□□ 0.1
USP34-218ENST00000490552 SYNJ1O43426 1573 aa15.64■□□□□ 0.09
USP34-218ENST00000490552 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
USP34-218ENST00000490552 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
USP34-218ENST00000490552 CUX1P39880 1505 aa15.59■□□□□ 0.09
USP34-218ENST00000490552 EEA1Q15075 1411 aa15.56■□□□□ 0.08
USP34-218ENST00000490552 DNMBPQ6XZF7 1577 aa15.55■□□□□ 0.08
USP34-218ENST00000490552 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
USP34-218ENST00000490552 TOPBP1Q92547 1522 aa15.5■□□□□ 0.07
USP34-218ENST00000490552 MRC2Q9UBG0 1479 aa15.47■□□□□ 0.07
USP34-218ENST00000490552 URB2Q14146 1524 aaKnown RBP15.46■□□□□ 0.07
USP34-218ENST00000490552 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
USP34-218ENST00000490552 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
USP34-218ENST00000490552 SOGA1O94964 1423 aa15.44■□□□□ 0.06
USP34-218ENST00000490552 FAM9AQ8IZU1 332 aaPredicted RBP15.42■□□□□ 0.06
USP34-218ENST00000490552 KIF27Q86VH2 1401 aa15.41■□□□□ 0.06
USP34-218ENST00000490552 POLA1P09884 1462 aaPredicted RBP15.41■□□□□ 0.06
USP34-218ENST00000490552 CSRNP3Q8WYN3 585 aa15.4■□□□□ 0.06
USP34-218ENST00000490552 WDR62O43379 1518 aa15.4■□□□□ 0.06
USP34-218ENST00000490552 ABCA10Q8WWZ4 1543 aa15.37■□□□□ 0.05
USP34-218ENST00000490552 RUSC2Q8N2Y8 1516 aa15.35■□□□□ 0.05
USP34-218ENST00000490552 CUX2O14529 1486 aa15.34■□□□□ 0.05
USP34-218ENST00000490552 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.04
USP34-218ENST00000490552 RAD54L2Q9Y4B4 1467 aa15.31■□□□□ 0.04
USP34-218ENST00000490552 LOC105371045A0A1W2PR82 267 aa15.29■□□□□ 0.04
USP34-218ENST00000490552 IFT140Q96RY7 1462 aa15.29■□□□□ 0.04
USP34-218ENST00000490552 KIF21BO75037 1637 aa15.28■□□□□ 0.04
USP34-218ENST00000490552 WDR97A6NE52 1622 aa15.27■□□□□ 0.04
USP34-218ENST00000490552 GOLGA3Q08378 1498 aa15.27■□□□□ 0.03
USP34-218ENST00000490552 TARBP1Q13395 1621 aaKnown RBP15.27■□□□□ 0.03
USP34-218ENST00000490552 PRXQ9BXM0 1461 aa15.24■□□□□ 0.03
USP34-218ENST00000490552 ERICH3Q5RHP9 1530 aa15.24■□□□□ 0.03
USP34-218ENST00000490552 IGF1RP08069 1367 aa15.24■□□□□ 0.03
USP34-218ENST00000490552 ABCA5Q8WWZ7 1642 aa15.22■□□□□ 0.03
USP34-218ENST00000490552 GAPVD1Q14C86 1478 aa15.21■□□□□ 0.03
USP34-218ENST00000490552 TNIKQ9UKE5 1360 aa15.2■□□□□ 0.02
USP34-218ENST00000490552 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
USP34-218ENST00000490552 CARMIL1Q5VZK9 1371 aa15.18■□□□□ 0.02
USP34-218ENST00000490552 CUL7Q14999 1698 aa15.18■□□□□ 0.02
USP34-218ENST00000490552 UBTFP17480 764 aaKnown RBP15.17■□□□□ 0.02
USP34-218ENST00000490552 POTEDQ86YR6 584 aa15.16■□□□□ 0.02
USP34-218ENST00000490552 RAPGEF2Q9Y4G8 1499 aa15.16■□□□□ 0.02
USP34-218ENST00000490552 GRIN2BQ13224 1484 aa15.14■□□□□ 0.01
USP34-218ENST00000490552 EHMT2Q96KQ7 1210 aa15.13■□□□□ 0.01
USP34-218ENST00000490552 AQRO60306 1485 aaKnown RBP eCLIP15.11■□□□□ 0.019e-7■■■■□ 23
USP34-218ENST00000490552 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
USP34-218ENST00000490552 PBRM1Q86U86 1689 aa15.09■□□□□ 0.01
USP34-218ENST00000490552 EIF4G3O43432 1585 aaKnown RBP15.08■□□□□ 0.01
USP34-218ENST00000490552 FHAD1B1AJZ9 1412 aa15.07■□□□□ 0
USP34-218ENST00000490552 CEP162Q5TB80 1403 aa15.06■□□□□ 0
USP34-218ENST00000490552 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
USP34-218ENST00000490552 ADAMTS12P58397 1594 aa15.03■□□□□ -0
USP34-218ENST00000490552 SNAPC4Q5SXM2 1469 aa15□□□□□ -0.01
USP34-218ENST00000490552 CLIP1P30622 1438 aa14.99□□□□□ -0.01
USP34-218ENST00000490552 SYNJ2O15056 1496 aa14.96□□□□□ -0.01
USP34-218ENST00000490552 CTTNBP2Q8WZ74 1663 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms