RNA–Protein interactions for RNA: ENST00000490530.1

MTM1-205, Transcript of myotubularin 1, humanhuman

TSL 3

Gene MTM1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTM1-205ENST00000490530 NISCHQ9Y2I1 1504 aa25.62■■□□□ 1.69
MTM1-205ENST00000490530 ABCC9O60706 1549 aa24.95■■□□□ 1.58
MTM1-205ENST00000490530 DNAJC5BQ9UF47 199 aa24.64■■□□□ 1.54
MTM1-205ENST00000490530 DNAJC5Q9H3Z4 198 aa23.75■■□□□ 1.39
MTM1-205ENST00000490530 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
MTM1-205ENST00000490530 RB1CC1Q8TDY2 1594 aa23.18■■□□□ 1.3
MTM1-205ENST00000490530 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
MTM1-205ENST00000490530 NACADO15069 1562 aa22.68■■□□□ 1.22
MTM1-205ENST00000490530 CECR2Q9BXF3 1484 aa22.66■■□□□ 1.22
MTM1-205ENST00000490530 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
MTM1-205ENST00000490530 BICRAQ9NZM4 1560 aa22.49■■□□□ 1.19
MTM1-205ENST00000490530 CC2D2AQ9P2K1 1620 aa22.46■■□□□ 1.19
MTM1-205ENST00000490530 DCAF8L2P0C7V8 631 aa22.21■■□□□ 1.15
MTM1-205ENST00000490530 SHROOM4Q9ULL8 1493 aa22.19■■□□□ 1.14
MTM1-205ENST00000490530 CUX2O14529 1486 aa22.16■■□□□ 1.14
MTM1-205ENST00000490530 EIF4G1Q04637 1599 aaKnown RBP22.09■■□□□ 1.13
MTM1-205ENST00000490530 TRIM41Q8WV44 630 aa22.07■■□□□ 1.12
MTM1-205ENST00000490530 MYO15BQ96JP2 1530 aa21.94■■□□□ 1.1
MTM1-205ENST00000490530 ERCC6Q03468 1493 aa21.7■■□□□ 1.06
MTM1-205ENST00000490530 SCRIBQ14160 1630 aa21.42■■□□□ 1.02
MTM1-205ENST00000490530 AEBP2Q6ZN18 517 aaPredicted RBP21.2■□□□□ 0.98
MTM1-205ENST00000490530 DCAF1Q9Y4B6 1507 aa21.13■□□□□ 0.97
MTM1-205ENST00000490530 THOC2Q8NI27 1593 aaKnown RBP21.1■□□□□ 0.97
MTM1-205ENST00000490530 NESP48681 1621 aa21■□□□□ 0.95
MTM1-205ENST00000490530 NCAPD3P42695 1498 aa20.97■□□□□ 0.95
MTM1-205ENST00000490530 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
MTM1-205ENST00000490530 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
MTM1-205ENST00000490530 BAZ1AQ9NRL2 1556 aaPredicted RBP20.84■□□□□ 0.93
MTM1-205ENST00000490530 SMARCA2P51531 1590 aa20.83■□□□□ 0.92
MTM1-205ENST00000490530 TRHP20396 242 aaPredicted RBP20.72■□□□□ 0.91
MTM1-205ENST00000490530 RIMBP3CA6NJZ7 1639 aa20.71■□□□□ 0.91
MTM1-205ENST00000490530 RIMBP3BA6NNM3 1639 aa20.71■□□□□ 0.91
MTM1-205ENST00000490530 RIMBP3Q9UFD9 1639 aa20.71■□□□□ 0.91
MTM1-205ENST00000490530 LAMC3Q9Y6N6 1575 aa20.7■□□□□ 0.9
MTM1-205ENST00000490530 PDS5BQ9NTI5 1447 aa20.68■□□□□ 0.9
MTM1-205ENST00000490530 ATAD2BQ9ULI0 1458 aa20.68■□□□□ 0.9
MTM1-205ENST00000490530 HMGXB3Q12766 1538 aa20.67■□□□□ 0.9
MTM1-205ENST00000490530 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
MTM1-205ENST00000490530 ARHGEF11O15085 1522 aa20.54■□□□□ 0.88
MTM1-205ENST00000490530 MRC2Q9UBG0 1479 aa20.54■□□□□ 0.88
MTM1-205ENST00000490530 ILDR1Q86SU0 546 aaPredicted RBP20.53■□□□□ 0.88
MTM1-205ENST00000490530 WDR62O43379 1518 aa20.53■□□□□ 0.88
MTM1-205ENST00000490530 CYB5RLQ6IPT4 315 aa20.48■□□□□ 0.87
MTM1-205ENST00000490530 BAZ1BQ9UIG0 1483 aaKnown RBP20.41■□□□□ 0.86
MTM1-205ENST00000490530 CADPSQ9ULU8 1353 aa20.26■□□□□ 0.83
MTM1-205ENST00000490530 SMARCA4P51532 1647 aa20.26■□□□□ 0.83
MTM1-205ENST00000490530 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
MTM1-205ENST00000490530 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
MTM1-205ENST00000490530 PEG3Q9GZU2 1588 aa20.12■□□□□ 0.81
MTM1-205ENST00000490530 RSF1Q96T23 1441 aaPredicted RBP20.02■□□□□ 0.8
MTM1-205ENST00000490530 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
MTM1-205ENST00000490530 URB2Q14146 1524 aaKnown RBP19.91■□□□□ 0.78
MTM1-205ENST00000490530 ZNF608Q9ULD9 1512 aaPredicted RBP19.88■□□□□ 0.77
MTM1-205ENST00000490530 IFT140Q96RY7 1462 aa19.84■□□□□ 0.77
MTM1-205ENST00000490530 CHD1O14646 1710 aa19.77■□□□□ 0.76
MTM1-205ENST00000490530 CFTRP13569 1480 aa19.73■□□□□ 0.75
MTM1-205ENST00000490530 FBLN2P98095 1184 aa19.72■□□□□ 0.75
MTM1-205ENST00000490530 EIF4G3O43432 1585 aaKnown RBP19.7■□□□□ 0.74
MTM1-205ENST00000490530 KDM4FA0A1W2PPD8 638 aa19.68■□□□□ 0.74
MTM1-205ENST00000490530 MROH2BQ7Z745 1585 aa19.68■□□□□ 0.74
MTM1-205ENST00000490530 CLASP1Q7Z460 1538 aa19.59■□□□□ 0.73
MTM1-205ENST00000490530 FBXO41Q8TF61 875 aa19.55■□□□□ 0.72
MTM1-205ENST00000490530 AQRO60306 1485 aaKnown RBP eCLIP19.54■□□□□ 0.72
MTM1-205ENST00000490530 ERCC6L2Q5T890 1561 aa19.53■□□□□ 0.72
MTM1-205ENST00000490530 GAPVD1Q14C86 1478 aa19.53■□□□□ 0.72
MTM1-205ENST00000490530 SYNJ1O43426 1573 aa19.47■□□□□ 0.71
MTM1-205ENST00000490530 LMTK3Q96Q04 1460 aa19.47■□□□□ 0.71
MTM1-205ENST00000490530 TOPBP1Q92547 1522 aa19.46■□□□□ 0.71
MTM1-205ENST00000490530 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
MTM1-205ENST00000490530 TARBP1Q13395 1621 aaKnown RBP19.38■□□□□ 0.69
MTM1-205ENST00000490530 SOCS7O14512 581 aa19.37■□□□□ 0.69
MTM1-205ENST00000490530 CHMP7Q8WUX9 453 aaPredicted RBP19.37■□□□□ 0.69
MTM1-205ENST00000490530 KIF13AQ9H1H9 1805 aa19.37■□□□□ 0.69
MTM1-205ENST00000490530 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
MTM1-205ENST00000490530 WIZO95785 1651 aa19.33■□□□□ 0.69
MTM1-205ENST00000490530 PRDM2Q13029 1718 aa19.31■□□□□ 0.68
MTM1-205ENST00000490530 SNAPC4Q5SXM2 1469 aa19.3■□□□□ 0.68
MTM1-205ENST00000490530 DNMBPQ6XZF7 1577 aa19.27■□□□□ 0.67
MTM1-205ENST00000490530 KDM6BO15054 1643 aa19.25■□□□□ 0.67
MTM1-205ENST00000490530 MAGI1Q96QZ7 1491 aaPredicted RBP19.24■□□□□ 0.67
MTM1-205ENST00000490530 TDRD9Q8NDG6 1382 aaKnown RBP19.2■□□□□ 0.66
MTM1-205ENST00000490530 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
MTM1-205ENST00000490530 SYNJ2O15056 1496 aa19.2■□□□□ 0.66
MTM1-205ENST00000490530 ADGRL1O94910 1474 aa19.19■□□□□ 0.66
MTM1-205ENST00000490530 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
MTM1-205ENST00000490530 ABCC10Q5T3U5 1492 aa19.16■□□□□ 0.66
MTM1-205ENST00000490530 WDR97A6NE52 1622 aa19.15■□□□□ 0.66
MTM1-205ENST00000490530 ILDR2Q71H61 639 aa19.15■□□□□ 0.66
MTM1-205ENST00000490530 RAD54L2Q9Y4B4 1467 aa19.09■□□□□ 0.65
MTM1-205ENST00000490530 GRIN2BQ13224 1484 aa19.09■□□□□ 0.65
MTM1-205ENST00000490530 TOP2AP11388 1531 aaKnown RBP19.07■□□□□ 0.64
MTM1-205ENST00000490530 SOGA1O94964 1423 aa19.07■□□□□ 0.64
MTM1-205ENST00000490530 DISP3Q9P2K9 1392 aa19.05■□□□□ 0.64
MTM1-205ENST00000490530 DIP2BQ9P265 1576 aa19.03■□□□□ 0.64
MTM1-205ENST00000490530 CEP170Q5SW79 1584 aa18.99■□□□□ 0.63
MTM1-205ENST00000490530 MAPKBP1O60336 1514 aa18.99■□□□□ 0.63
MTM1-205ENST00000490530 NPM1P06748 294 aaKnown RBP eCLIP18.96■□□□□ 0.63
MTM1-205ENST00000490530 TSPOAP1O95153 1857 aa18.88■□□□□ 0.61
MTM1-205ENST00000490530 SHROOM2Q13796 1616 aa18.86■□□□□ 0.61
MTM1-205ENST00000490530 CCDC88BA6NC98 1476 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms