RNA–Protein interactions for RNA: ENST00000490528.1

ALKBH4-202, Transcript of alkB homolog 4, lysine demethylase, humanhuman

TSL 2

Gene ALKBH4, Length 1,405 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH4-202ENST00000490528 NISCHQ9Y2I1 1504 aa47.08■■■■■ 5.13
ALKBH4-202ENST00000490528 CCDC180Q9P1Z9 1646 aa41.78■■■■■ 4.28
ALKBH4-202ENST00000490528 ABCC9O60706 1549 aa41.63■■■■■ 4.25
ALKBH4-202ENST00000490528 DCAF8L2P0C7V8 631 aa40.03■■■■■ 4
ALKBH4-202ENST00000490528 RB1CC1Q8TDY2 1594 aa39.62■■■■□ 3.93
ALKBH4-202ENST00000490528 NACADO15069 1562 aa39.44■■■■□ 3.9
ALKBH4-202ENST00000490528 ZCCHC6Q5VYS8 1495 aaKnown RBP39.11■■■■□ 3.85
ALKBH4-202ENST00000490528 PABPN1Q86U42 306 aaKnown RBP eCLIP39.01■■■■□ 3.84
ALKBH4-202ENST00000490528 MYO15BQ96JP2 1530 aa38.91■■■■□ 3.82
ALKBH4-202ENST00000490528 DCAF1Q9Y4B6 1507 aa38.7■■■■□ 3.79
ALKBH4-202ENST00000490528 UNC13AQ9UPW8 1703 aa38.7■■■■□ 3.79
ALKBH4-202ENST00000490528 DNAJC5BQ9UF47 199 aa38.55■■■■□ 3.76
ALKBH4-202ENST00000490528 SCRIBQ14160 1630 aa38.46■■■■□ 3.75
ALKBH4-202ENST00000490528 BICRAQ9NZM4 1560 aa38.46■■■■□ 3.75
ALKBH4-202ENST00000490528 SHROOM4Q9ULL8 1493 aa37.74■■■■□ 3.63
ALKBH4-202ENST00000490528 EIF4G1Q04637 1599 aaKnown RBP37.49■■■■□ 3.59
ALKBH4-202ENST00000490528 CC2D2AQ9P2K1 1620 aa37.47■■■■□ 3.59
ALKBH4-202ENST00000490528 CECR2Q9BXF3 1484 aa37.33■■■■□ 3.57
ALKBH4-202ENST00000490528 SMARCA4P51532 1647 aa36.59■■■■□ 3.45
ALKBH4-202ENST00000490528 ATAD2BQ9ULI0 1458 aa36.51■■■■□ 3.44
ALKBH4-202ENST00000490528 BAZ1AQ9NRL2 1556 aaPredicted RBP36.47■■■■□ 3.43
ALKBH4-202ENST00000490528 NCAPD3P42695 1498 aa36.44■■■■□ 3.42
ALKBH4-202ENST00000490528 MROH2BQ7Z745 1585 aa36.4■■■■□ 3.42
ALKBH4-202ENST00000490528 SMARCA2P51531 1590 aa36.35■■■■□ 3.41
ALKBH4-202ENST00000490528 BAZ1BQ9UIG0 1483 aaKnown RBP36.23■■■■□ 3.39
ALKBH4-202ENST00000490528 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
ALKBH4-202ENST00000490528 PEG3Q9GZU2 1588 aa36.05■■■■□ 3.36
ALKBH4-202ENST00000490528 WIZO95785 1651 aa36■■■■□ 3.35
ALKBH4-202ENST00000490528 NESP48681 1621 aa35.93■■■■□ 3.34
ALKBH4-202ENST00000490528 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
ALKBH4-202ENST00000490528 RSF1Q96T23 1441 aaPredicted RBP35.85■■■■□ 3.33
ALKBH4-202ENST00000490528 LAMC3Q9Y6N6 1575 aa35.49■■■■□ 3.27
ALKBH4-202ENST00000490528 CADPSQ9ULU8 1353 aa35.48■■■■□ 3.27
ALKBH4-202ENST00000490528 TOP2AP11388 1531 aaKnown RBP35.47■■■■□ 3.27
ALKBH4-202ENST00000490528 PDS5BQ9NTI5 1447 aa35.38■■■■□ 3.26
ALKBH4-202ENST00000490528 CUX2O14529 1486 aa35.35■■■■□ 3.25
ALKBH4-202ENST00000490528 KIF21AQ7Z4S6 1674 aa35.33■■■■□ 3.25
ALKBH4-202ENST00000490528 THOC2Q8NI27 1593 aaKnown RBP35.19■■■■□ 3.22
ALKBH4-202ENST00000490528 CCDC88BA6NC98 1476 aa35.18■■■■□ 3.22
ALKBH4-202ENST00000490528 SUPT5HO00267 1087 aaKnown RBP35.14■■■■□ 3.22
ALKBH4-202ENST00000490528 CFTRP13569 1480 aa35.13■■■■□ 3.21
ALKBH4-202ENST00000490528 FANCD2Q9BXW9 1451 aa35.11■■■■□ 3.21
ALKBH4-202ENST00000490528 CEP164Q9UPV0 1460 aa35.06■■■■□ 3.2
ALKBH4-202ENST00000490528 MRC2Q9UBG0 1479 aa35.04■■■■□ 3.2
ALKBH4-202ENST00000490528 WDR62O43379 1518 aa34.84■■■■□ 3.17
ALKBH4-202ENST00000490528 DNAJC5Q9H3Z4 198 aa34.81■■■■□ 3.16
ALKBH4-202ENST00000490528 URB2Q14146 1524 aaKnown RBP34.78■■■■□ 3.16
ALKBH4-202ENST00000490528 PRDM2Q13029 1718 aa34.67■■■■□ 3.14
ALKBH4-202ENST00000490528 TOPBP1Q92547 1522 aa34.49■■■■□ 3.11
ALKBH4-202ENST00000490528 DNMBPQ6XZF7 1577 aa34.34■■■■□ 3.09
ALKBH4-202ENST00000490528 ZNF608Q9ULD9 1512 aaPredicted RBP34.31■■■■□ 3.08
ALKBH4-202ENST00000490528 ABCC8Q09428 1581 aa34.3■■■■□ 3.08
ALKBH4-202ENST00000490528 IFT140Q96RY7 1462 aa34.29■■■■□ 3.08
ALKBH4-202ENST00000490528 RAD54L2Q9Y4B4 1467 aa34.19■■■■□ 3.06
ALKBH4-202ENST00000490528 POLA1P09884 1462 aaPredicted RBP34.18■■■■□ 3.06
ALKBH4-202ENST00000490528 CUX1P39880 1505 aa34.13■■■■□ 3.05
ALKBH4-202ENST00000490528 AQRO60306 1485 aaKnown RBP eCLIP34.13■■■■□ 3.05
ALKBH4-202ENST00000490528 SOGA1O94964 1423 aa34.11■■■■□ 3.05
ALKBH4-202ENST00000490528 FGD5Q6ZNL6 1462 aa34.09■■■■□ 3.05
ALKBH4-202ENST00000490528 OSCARQ8IYS5 282 aa34.06■■■■□ 3.04
ALKBH4-202ENST00000490528 TDRD9Q8NDG6 1382 aaKnown RBP34.06■■■■□ 3.04
ALKBH4-202ENST00000490528 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
ALKBH4-202ENST00000490528 EIF4G3O43432 1585 aaKnown RBP34.03■■■■□ 3.04
ALKBH4-202ENST00000490528 FBLN2P98095 1184 aa33.99■■■■□ 3.03
ALKBH4-202ENST00000490528 TRIM41Q8WV44 630 aa33.87■■■■□ 3.01
ALKBH4-202ENST00000490528 WRNQ14191 1432 aaPredicted RBP eCLIP33.82■■■■□ 3.01
ALKBH4-202ENST00000490528 SYNJ1O43426 1573 aa33.75■■■□□ 2.99
ALKBH4-202ENST00000490528 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
ALKBH4-202ENST00000490528 CHMP7Q8WUX9 453 aaPredicted RBP33.69■■■□□ 2.98
ALKBH4-202ENST00000490528 CHD1O14646 1710 aa33.67■■■□□ 2.98
ALKBH4-202ENST00000490528 GRIN2BQ13224 1484 aa33.65■■■□□ 2.98
ALKBH4-202ENST00000490528 GAPVD1Q14C86 1478 aa33.65■■■□□ 2.98
ALKBH4-202ENST00000490528 TOP2BQ02880 1626 aa33.65■■■□□ 2.98
ALKBH4-202ENST00000490528 WDR97A6NE52 1622 aa33.62■■■□□ 2.97
ALKBH4-202ENST00000490528 ABCA10Q8WWZ4 1543 aa33.62■■■□□ 2.97
ALKBH4-202ENST00000490528 BIVM-ERCC5R4GMW8 1640 aa33.61■■■□□ 2.97
ALKBH4-202ENST00000490528 PBRM1Q86U86 1689 aa33.51■■■□□ 2.95
ALKBH4-202ENST00000490528 MAGI1Q96QZ7 1491 aaPredicted RBP33.5■■■□□ 2.95
ALKBH4-202ENST00000490528 ABCA5Q8WWZ7 1642 aa33.49■■■□□ 2.95
ALKBH4-202ENST00000490528 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
ALKBH4-202ENST00000490528 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
ALKBH4-202ENST00000490528 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
ALKBH4-202ENST00000490528 SYNJ2O15056 1496 aa33.43■■■□□ 2.94
ALKBH4-202ENST00000490528 ARHGEF11O15085 1522 aa33.41■■■□□ 2.94
ALKBH4-202ENST00000490528 CYB5RLQ6IPT4 315 aa33.38■■■□□ 2.93
ALKBH4-202ENST00000490528 ADAMTS12P58397 1594 aa33.23■■■□□ 2.91
ALKBH4-202ENST00000490528 CLASP1Q7Z460 1538 aa33.22■■■□□ 2.91
ALKBH4-202ENST00000490528 FHAD1B1AJZ9 1412 aa33.22■■■□□ 2.91
ALKBH4-202ENST00000490528 GRIN2AQ12879 1464 aa33.21■■■□□ 2.91
ALKBH4-202ENST00000490528 ERICH3Q5RHP9 1530 aa33.18■■■□□ 2.9
ALKBH4-202ENST00000490528 ARAP1Q96P48 1450 aa33.15■■■□□ 2.9
ALKBH4-202ENST00000490528 KIF27Q86VH2 1401 aa33.12■■■□□ 2.89
ALKBH4-202ENST00000490528 CEP170Q5SW79 1584 aa33.08■■■□□ 2.89
ALKBH4-202ENST00000490528 IGF1RP08069 1367 aa33.06■■■□□ 2.88
ALKBH4-202ENST00000490528 NUP160Q12769 1436 aa33.02■■■□□ 2.88
ALKBH4-202ENST00000490528 ERCC6L2Q5T890 1561 aa32.95■■■□□ 2.87
ALKBH4-202ENST00000490528 RUSC2Q8N2Y8 1516 aa32.91■■■□□ 2.86
ALKBH4-202ENST00000490528 CARMIL1Q5VZK9 1371 aa32.9■■■□□ 2.86
ALKBH4-202ENST00000490528 TRHP20396 242 aaPredicted RBP32.88■■■□□ 2.85
ALKBH4-202ENST00000490528 JPH4Q96JJ6 628 aa32.88■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms