RNA–Protein interactions for RNA: ENST00000490359.2

LRCH4-208, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-208ENST00000490359 NISCHQ9Y2I1 1504 aa40.9■■■■■ 4.14
LRCH4-208ENST00000490359 CCDC180Q9P1Z9 1646 aa36.38■■■■□ 3.41
LRCH4-208ENST00000490359 ABCC9O60706 1549 aa36.02■■■■□ 3.36
LRCH4-208ENST00000490359 DCAF8L2P0C7V8 631 aa34.42■■■■□ 3.1
LRCH4-208ENST00000490359 RB1CC1Q8TDY2 1594 aa34.38■■■■□ 3.09
LRCH4-208ENST00000490359 NACADO15069 1562 aa34.28■■■■□ 3.08
LRCH4-208ENST00000490359 ZCCHC6Q5VYS8 1495 aaKnown RBP34.03■■■■□ 3.04
LRCH4-208ENST00000490359 MYO15BQ96JP2 1530 aa34■■■■□ 3.03
LRCH4-208ENST00000490359 DCAF1Q9Y4B6 1507 aa33.8■■■■□ 3
LRCH4-208ENST00000490359 PABPN1Q86U42 306 aaKnown RBP eCLIP33.67■■■□□ 2.98
LRCH4-208ENST00000490359 DNAJC5BQ9UF47 199 aa33.56■■■□□ 2.96
LRCH4-208ENST00000490359 UNC13AQ9UPW8 1703 aa33.51■■■□□ 2.96
LRCH4-208ENST00000490359 BICRAQ9NZM4 1560 aa33.31■■■□□ 2.92
LRCH4-208ENST00000490359 SCRIBQ14160 1630 aa33.25■■■□□ 2.91
LRCH4-208ENST00000490359 SHROOM4Q9ULL8 1493 aa32.95■■■□□ 2.87
LRCH4-208ENST00000490359 CECR2Q9BXF3 1484 aa32.48■■■□□ 2.79
LRCH4-208ENST00000490359 EIF4G1Q04637 1599 aaKnown RBP32.46■■■□□ 2.79
LRCH4-208ENST00000490359 CC2D2AQ9P2K1 1620 aa32.42■■■□□ 2.78
LRCH4-208ENST00000490359 SMARCA4P51532 1647 aa31.76■■■□□ 2.67
LRCH4-208ENST00000490359 BAZ1AQ9NRL2 1556 aaPredicted RBP31.71■■■□□ 2.67
LRCH4-208ENST00000490359 ATAD2BQ9ULI0 1458 aa31.65■■■□□ 2.66
LRCH4-208ENST00000490359 NCAPD3P42695 1498 aa31.64■■■□□ 2.66
LRCH4-208ENST00000490359 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
LRCH4-208ENST00000490359 MROH2BQ7Z745 1585 aa31.53■■■□□ 2.64
LRCH4-208ENST00000490359 HMGXB3Q12766 1538 aa31.45■■■□□ 2.63
LRCH4-208ENST00000490359 PEG3Q9GZU2 1588 aa31.43■■■□□ 2.62
LRCH4-208ENST00000490359 BAZ1BQ9UIG0 1483 aaKnown RBP31.39■■■□□ 2.62
LRCH4-208ENST00000490359 ERCC6Q03468 1493 aa31.31■■■□□ 2.6
LRCH4-208ENST00000490359 WIZO95785 1651 aa31.16■■■□□ 2.58
LRCH4-208ENST00000490359 RSF1Q96T23 1441 aaPredicted RBP31.12■■■□□ 2.57
LRCH4-208ENST00000490359 CUX2O14529 1486 aa31.07■■■□□ 2.56
LRCH4-208ENST00000490359 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
LRCH4-208ENST00000490359 NESP48681 1621 aa30.95■■■□□ 2.54
LRCH4-208ENST00000490359 TOP2AP11388 1531 aaKnown RBP30.83■■■□□ 2.53
LRCH4-208ENST00000490359 PDS5BQ9NTI5 1447 aa30.81■■■□□ 2.52
LRCH4-208ENST00000490359 LAMC3Q9Y6N6 1575 aa30.81■■■□□ 2.52
LRCH4-208ENST00000490359 CADPSQ9ULU8 1353 aa30.73■■■□□ 2.51
LRCH4-208ENST00000490359 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
LRCH4-208ENST00000490359 CFTRP13569 1480 aa30.5■■■□□ 2.47
LRCH4-208ENST00000490359 CCDC88BA6NC98 1476 aa30.49■■■□□ 2.47
LRCH4-208ENST00000490359 THOC2Q8NI27 1593 aaKnown RBP30.48■■■□□ 2.47
LRCH4-208ENST00000490359 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
LRCH4-208ENST00000490359 MRC2Q9UBG0 1479 aa30.37■■■□□ 2.45
LRCH4-208ENST00000490359 CEP164Q9UPV0 1460 aa30.37■■■□□ 2.45
LRCH4-208ENST00000490359 SUPT5HO00267 1087 aaKnown RBP30.28■■■□□ 2.44
LRCH4-208ENST00000490359 WDR62O43379 1518 aa30.22■■■□□ 2.43
LRCH4-208ENST00000490359 PRDM2Q13029 1718 aa30.19■■■□□ 2.42
LRCH4-208ENST00000490359 URB2Q14146 1524 aaKnown RBP30.08■■■□□ 2.41
LRCH4-208ENST00000490359 OSCARQ8IYS5 282 aa29.92■■■□□ 2.38
LRCH4-208ENST00000490359 TOPBP1Q92547 1522 aa29.86■■■□□ 2.37
LRCH4-208ENST00000490359 ABCC8Q09428 1581 aa29.85■■■□□ 2.37
LRCH4-208ENST00000490359 TRIM41Q8WV44 630 aa29.82■■■□□ 2.36
LRCH4-208ENST00000490359 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
LRCH4-208ENST00000490359 IFT140Q96RY7 1462 aa29.73■■■□□ 2.35
LRCH4-208ENST00000490359 ZNF608Q9ULD9 1512 aaPredicted RBP29.61■■■□□ 2.33
LRCH4-208ENST00000490359 POLA1P09884 1462 aaPredicted RBP29.61■■■□□ 2.33
LRCH4-208ENST00000490359 CUX1P39880 1505 aa29.59■■■□□ 2.33
LRCH4-208ENST00000490359 TARBP1Q13395 1621 aaKnown RBP29.53■■■□□ 2.32
LRCH4-208ENST00000490359 FGD5Q6ZNL6 1462 aa29.52■■■□□ 2.32
LRCH4-208ENST00000490359 SOGA1O94964 1423 aa29.5■■■□□ 2.31
LRCH4-208ENST00000490359 RAD54L2Q9Y4B4 1467 aa29.49■■■□□ 2.31
LRCH4-208ENST00000490359 FBLN2P98095 1184 aa29.47■■■□□ 2.31
LRCH4-208ENST00000490359 EIF4G3O43432 1585 aaKnown RBP29.46■■■□□ 2.31
LRCH4-208ENST00000490359 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.34e-10■■■□□ 18.5
LRCH4-208ENST00000490359 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
LRCH4-208ENST00000490359 WRNQ14191 1432 aaPredicted RBP eCLIP29.36■■■□□ 2.29
LRCH4-208ENST00000490359 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
LRCH4-208ENST00000490359 TOP2BQ02880 1626 aa29.27■■■□□ 2.28
LRCH4-208ENST00000490359 SYNJ1O43426 1573 aa29.26■■■□□ 2.28
LRCH4-208ENST00000490359 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
LRCH4-208ENST00000490359 BIVM-ERCC5R4GMW8 1640 aa29.26■■■□□ 2.27
LRCH4-208ENST00000490359 ABCA10Q8WWZ4 1543 aa29.21■■■□□ 2.27
LRCH4-208ENST00000490359 GRIN2BQ13224 1484 aa29.17■■■□□ 2.26
LRCH4-208ENST00000490359 SNAPC4Q5SXM2 1469 aa29.17■■■□□ 2.26
LRCH4-208ENST00000490359 CYB5RLQ6IPT4 315 aa29.16■■■□□ 2.26
LRCH4-208ENST00000490359 GAPVD1Q14C86 1478 aa29.15■■■□□ 2.26
LRCH4-208ENST00000490359 CHD1O14646 1710 aa29.1■■■□□ 2.25
LRCH4-208ENST00000490359 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
LRCH4-208ENST00000490359 ABCA5Q8WWZ7 1642 aa29.09■■■□□ 2.25
LRCH4-208ENST00000490359 ARHGEF11O15085 1522 aa29.08■■■□□ 2.25
LRCH4-208ENST00000490359 RIMBP3CA6NJZ7 1639 aa29.07■■■□□ 2.24
LRCH4-208ENST00000490359 RIMBP3BA6NNM3 1639 aa29.07■■■□□ 2.24
LRCH4-208ENST00000490359 RIMBP3Q9UFD9 1639 aa29.07■■■□□ 2.24
LRCH4-208ENST00000490359 PBRM1Q86U86 1689 aa29.05■■■□□ 2.24
LRCH4-208ENST00000490359 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
LRCH4-208ENST00000490359 TRHP20396 242 aaPredicted RBP28.96■■■□□ 2.23
LRCH4-208ENST00000490359 ERICH3Q5RHP9 1530 aa28.85■■■□□ 2.21
LRCH4-208ENST00000490359 ADAMTS12P58397 1594 aa28.84■■■□□ 2.21
LRCH4-208ENST00000490359 FHAD1B1AJZ9 1412 aa28.82■■■□□ 2.2
LRCH4-208ENST00000490359 CLASP1Q7Z460 1538 aa28.79■■■□□ 2.2
LRCH4-208ENST00000490359 GRIN2AQ12879 1464 aa28.78■■■□□ 2.2
LRCH4-208ENST00000490359 KIF27Q86VH2 1401 aa28.76■■■□□ 2.19
LRCH4-208ENST00000490359 ARAP1Q96P48 1450 aa28.74■■■□□ 2.19
LRCH4-208ENST00000490359 NUP160Q12769 1436 aa28.66■■■□□ 2.18
LRCH4-208ENST00000490359 IGF1RP08069 1367 aa28.65■■■□□ 2.18
LRCH4-208ENST00000490359 CEP170Q5SW79 1584 aa28.63■■■□□ 2.17
LRCH4-208ENST00000490359 CUL7Q14999 1698 aa28.55■■■□□ 2.16
LRCH4-208ENST00000490359 CARMIL1Q5VZK9 1371 aa28.5■■■□□ 2.15
LRCH4-208ENST00000490359 RUSC2Q8N2Y8 1516 aa28.44■■■□□ 2.14
LRCH4-208ENST00000490359 JPH4Q96JJ6 628 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms