RNA–Protein interactions for RNA: ENST00000490261.1

GFM1-211, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 3

Gene GFM1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-211ENST00000490261 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
GFM1-211ENST00000490261 CCDC180Q9P1Z9 1646 aa24.66■■□□□ 1.54
GFM1-211ENST00000490261 ABCC9O60706 1549 aa24.12■■□□□ 1.45
GFM1-211ENST00000490261 DCAF8L2P0C7V8 631 aa23.3■■□□□ 1.32
GFM1-211ENST00000490261 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
GFM1-211ENST00000490261 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
GFM1-211ENST00000490261 NACADO15069 1562 aa23.14■■□□□ 1.3
GFM1-211ENST00000490261 MYO15BQ96JP2 1530 aa22.96■■□□□ 1.27
GFM1-211ENST00000490261 DCAF1Q9Y4B6 1507 aa22.94■■□□□ 1.26
GFM1-211ENST00000490261 UNC13AQ9UPW8 1703 aa22.71■■□□□ 1.23
GFM1-211ENST00000490261 SCRIBQ14160 1630 aa22.64■■□□□ 1.21
GFM1-211ENST00000490261 PABPN1Q86U42 306 aaKnown RBP eCLIP22.56■■□□□ 1.2
GFM1-211ENST00000490261 BICRAQ9NZM4 1560 aa22.48■■□□□ 1.19
GFM1-211ENST00000490261 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.14
GFM1-211ENST00000490261 DNAJC5BQ9UF47 199 aa21.99■■□□□ 1.11
GFM1-211ENST00000490261 EIF4G1Q04637 1599 aaKnown RBP21.88■■□□□ 1.09
GFM1-211ENST00000490261 CC2D2AQ9P2K1 1620 aa21.79■■□□□ 1.08
GFM1-211ENST00000490261 CECR2Q9BXF3 1484 aa21.71■■□□□ 1.07
GFM1-211ENST00000490261 SMARCA4P51532 1647 aa21.58■■□□□ 1.05
GFM1-211ENST00000490261 BAZ1AQ9NRL2 1556 aaPredicted RBP21.54■■□□□ 1.04
GFM1-211ENST00000490261 MROH2BQ7Z745 1585 aa21.48■■□□□ 1.03
GFM1-211ENST00000490261 ATAD2BQ9ULI0 1458 aa21.42■■□□□ 1.02
GFM1-211ENST00000490261 SMARCA2P51531 1590 aa21.39■■□□□ 1.01
GFM1-211ENST00000490261 NCAPD3P42695 1498 aa21.33■■□□□ 1.01
GFM1-211ENST00000490261 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
GFM1-211ENST00000490261 WIZO95785 1651 aa21.28■■□□□ 1
GFM1-211ENST00000490261 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
GFM1-211ENST00000490261 HMGXB3Q12766 1538 aa21.27■■□□□ 1
GFM1-211ENST00000490261 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
GFM1-211ENST00000490261 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
GFM1-211ENST00000490261 NESP48681 1621 aa20.9■□□□□ 0.94
GFM1-211ENST00000490261 SUPT5HO00267 1087 aaKnown RBP20.89■□□□□ 0.93
GFM1-211ENST00000490261 LAMC3Q9Y6N6 1575 aa20.79■□□□□ 0.92
GFM1-211ENST00000490261 CCDC88BA6NC98 1476 aa20.77■□□□□ 0.92
GFM1-211ENST00000490261 ERCC6Q03468 1493 aa20.77■□□□□ 0.92
GFM1-211ENST00000490261 CADPSQ9ULU8 1353 aa20.75■□□□□ 0.91
GFM1-211ENST00000490261 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
GFM1-211ENST00000490261 CFTRP13569 1480 aa20.65■□□□□ 0.9
GFM1-211ENST00000490261 PDS5BQ9NTI5 1447 aa20.64■□□□□ 0.89
GFM1-211ENST00000490261 FANCD2Q9BXW9 1451 aa20.56■□□□□ 0.88
GFM1-211ENST00000490261 PRDM2Q13029 1718 aa20.55■□□□□ 0.88
GFM1-211ENST00000490261 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
GFM1-211ENST00000490261 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
GFM1-211ENST00000490261 MRC2Q9UBG0 1479 aa20.46■□□□□ 0.87
GFM1-211ENST00000490261 CUX2O14529 1486 aa20.43■□□□□ 0.86
GFM1-211ENST00000490261 WDR62O43379 1518 aa20.37■□□□□ 0.85
GFM1-211ENST00000490261 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
GFM1-211ENST00000490261 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
GFM1-211ENST00000490261 DNMBPQ6XZF7 1577 aa20.22■□□□□ 0.83
GFM1-211ENST00000490261 ABCC8Q09428 1581 aa20.17■□□□□ 0.82
GFM1-211ENST00000490261 CUX1P39880 1505 aa20.16■□□□□ 0.82
GFM1-211ENST00000490261 POLA1P09884 1462 aaPredicted RBP20.07■□□□□ 0.8
GFM1-211ENST00000490261 FGD5Q6ZNL6 1462 aa20.06■□□□□ 0.8
GFM1-211ENST00000490261 IFT140Q96RY7 1462 aa20.05■□□□□ 0.8
GFM1-211ENST00000490261 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
GFM1-211ENST00000490261 RAD54L2Q9Y4B4 1467 aa20.03■□□□□ 0.8
GFM1-211ENST00000490261 SYNJ1O43426 1573 aa20.02■□□□□ 0.8
GFM1-211ENST00000490261 ZNF608Q9ULD9 1512 aaPredicted RBP20.01■□□□□ 0.79
GFM1-211ENST00000490261 TARBP1Q13395 1621 aaKnown RBP20■□□□□ 0.79
GFM1-211ENST00000490261 SOGA1O94964 1423 aa19.98■□□□□ 0.79
GFM1-211ENST00000490261 BIVM-ERCC5R4GMW8 1640 aa19.98■□□□□ 0.79
GFM1-211ENST00000490261 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
GFM1-211ENST00000490261 EIF4G3O43432 1585 aaKnown RBP19.94■□□□□ 0.78
GFM1-211ENST00000490261 AQRO60306 1485 aaKnown RBP eCLIP19.91■□□□□ 0.78
GFM1-211ENST00000490261 WDR97A6NE52 1622 aa19.88■□□□□ 0.77
GFM1-211ENST00000490261 TDRD9Q8NDG6 1382 aaKnown RBP19.88■□□□□ 0.77
GFM1-211ENST00000490261 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
GFM1-211ENST00000490261 GAPVD1Q14C86 1478 aa19.77■□□□□ 0.76
GFM1-211ENST00000490261 ABCA5Q8WWZ7 1642 aa19.76■□□□□ 0.75
GFM1-211ENST00000490261 PBRM1Q86U86 1689 aa19.76■□□□□ 0.75
GFM1-211ENST00000490261 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
GFM1-211ENST00000490261 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
GFM1-211ENST00000490261 CHD1O14646 1710 aa19.68■□□□□ 0.74
GFM1-211ENST00000490261 FBLN2P98095 1184 aa19.68■□□□□ 0.74
GFM1-211ENST00000490261 TRIM41Q8WV44 630 aa19.66■□□□□ 0.74
GFM1-211ENST00000490261 DNAJC5Q9H3Z4 198 aa19.65■□□□□ 0.74
GFM1-211ENST00000490261 MAGI1Q96QZ7 1491 aaPredicted RBP19.65■□□□□ 0.74
GFM1-211ENST00000490261 OSCARQ8IYS5 282 aa19.6■□□□□ 0.73
GFM1-211ENST00000490261 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
GFM1-211ENST00000490261 KIF27Q86VH2 1401 aa19.59■□□□□ 0.73
GFM1-211ENST00000490261 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
GFM1-211ENST00000490261 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
GFM1-211ENST00000490261 SYNJ2O15056 1496 aa19.58■□□□□ 0.72
GFM1-211ENST00000490261 RUSC2Q8N2Y8 1516 aa19.52■□□□□ 0.72
GFM1-211ENST00000490261 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
GFM1-211ENST00000490261 GRIN2AQ12879 1464 aa19.49■□□□□ 0.71
GFM1-211ENST00000490261 IGF1RP08069 1367 aa19.49■□□□□ 0.71
GFM1-211ENST00000490261 CHIC1Q5VXU3 224 aa19.49■□□□□ 0.71
GFM1-211ENST00000490261 CUL7Q14999 1698 aa19.46■□□□□ 0.71
GFM1-211ENST00000490261 CLASP1Q7Z460 1538 aa19.42■□□□□ 0.7
GFM1-211ENST00000490261 CEP170Q5SW79 1584 aa19.42■□□□□ 0.7
GFM1-211ENST00000490261 CARMIL1Q5VZK9 1371 aa19.4■□□□□ 0.7
GFM1-211ENST00000490261 NUP160Q12769 1436 aa19.37■□□□□ 0.69
GFM1-211ENST00000490261 FAM9AQ8IZU1 332 aaPredicted RBP19.35■□□□□ 0.69
GFM1-211ENST00000490261 RIMBP3CA6NJZ7 1639 aa19.35■□□□□ 0.69
GFM1-211ENST00000490261 RIMBP3BA6NNM3 1639 aa19.35■□□□□ 0.69
GFM1-211ENST00000490261 RIMBP3Q9UFD9 1639 aa19.35■□□□□ 0.69
GFM1-211ENST00000490261 ARHGEF11O15085 1522 aa19.34■□□□□ 0.69
GFM1-211ENST00000490261 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
GFM1-211ENST00000490261 EEA1Q15075 1411 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms