RNA–Protein interactions for RNA: ENST00000490137.1

PTPN18-214, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 411 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-214ENST00000490137 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
PTPN18-214ENST00000490137 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
PTPN18-214ENST00000490137 NISCHQ9Y2I1 1504 aa15.98■□□□□ 0.15
PTPN18-214ENST00000490137 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
PTPN18-214ENST00000490137 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
PTPN18-214ENST00000490137 ABCC9O60706 1549 aa14.98□□□□□ -0.01
PTPN18-214ENST00000490137 CCDC180Q9P1Z9 1646 aa14.68□□□□□ -0.06
PTPN18-214ENST00000490137 DNAJC5BQ9UF47 199 aa14.51□□□□□ -0.09
PTPN18-214ENST00000490137 FOXD1Q16676 465 aa14.29□□□□□ -0.12
PTPN18-214ENST00000490137 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
PTPN18-214ENST00000490137 POTEDQ86YR6 584 aa14.16□□□□□ -0.14
PTPN18-214ENST00000490137 NACADO15069 1562 aa14□□□□□ -0.17
PTPN18-214ENST00000490137 DNAJC5Q9H3Z4 198 aa13.86□□□□□ -0.19
PTPN18-214ENST00000490137 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPN18-214ENST00000490137 UNC13AQ9UPW8 1703 aa13.79□□□□□ -0.2
PTPN18-214ENST00000490137 BICRAQ9NZM4 1560 aa13.73□□□□□ -0.21
PTPN18-214ENST00000490137 MYO15BQ96JP2 1530 aa13.72□□□□□ -0.21
PTPN18-214ENST00000490137 SHROOM4Q9ULL8 1493 aa13.7□□□□□ -0.22
PTPN18-214ENST00000490137 CECR2Q9BXF3 1484 aa13.63□□□□□ -0.23
PTPN18-214ENST00000490137 CC2D2AQ9P2K1 1620 aa13.59□□□□□ -0.23
PTPN18-214ENST00000490137 MSH5O43196 834 aa13.53□□□□□ -0.24
PTPN18-214ENST00000490137 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
PTPN18-214ENST00000490137 EIF4G1Q04637 1599 aaKnown RBP13.45□□□□□ -0.26
PTPN18-214ENST00000490137 CUX2O14529 1486 aa13.32□□□□□ -0.28
PTPN18-214ENST00000490137 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
PTPN18-214ENST00000490137 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
PTPN18-214ENST00000490137 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
PTPN18-214ENST00000490137 ZCCHC6Q5VYS8 1495 aaKnown RBP13.13□□□□□ -0.31
PTPN18-214ENST00000490137 ERCC6Q03468 1493 aa13.04□□□□□ -0.32
PTPN18-214ENST00000490137 PPP6R1Q9UPN7 881 aa12.99□□□□□ -0.33
PTPN18-214ENST00000490137 ADRA2BP18089 450 aa12.91□□□□□ -0.34
PTPN18-214ENST00000490137 NCAPD3P42695 1498 aa12.91□□□□□ -0.34
PTPN18-214ENST00000490137 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
PTPN18-214ENST00000490137 PLPPR3Q6T4P5 718 aa12.82□□□□□ -0.36
PTPN18-214ENST00000490137 THOC2Q8NI27 1593 aaKnown RBP12.8□□□□□ -0.36
PTPN18-214ENST00000490137 HMGXB3Q12766 1538 aa12.77□□□□□ -0.37
PTPN18-214ENST00000490137 SMARCA2P51531 1590 aa12.73□□□□□ -0.37
PTPN18-214ENST00000490137 ATAD2BQ9ULI0 1458 aa12.72□□□□□ -0.37
PTPN18-214ENST00000490137 LAMC3Q9Y6N6 1575 aa12.71□□□□□ -0.37
PTPN18-214ENST00000490137 NESP48681 1621 aa12.7□□□□□ -0.38
PTPN18-214ENST00000490137 PDS5BQ9NTI5 1447 aa12.63□□□□□ -0.39
PTPN18-214ENST00000490137 KIF21AQ7Z4S6 1674 aa12.59□□□□□ -0.39
PTPN18-214ENST00000490137 SMARCA4P51532 1647 aa12.58□□□□□ -0.4
PTPN18-214ENST00000490137 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
PTPN18-214ENST00000490137 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
PTPN18-214ENST00000490137 BAZ1BQ9UIG0 1483 aaKnown RBP12.56□□□□□ -0.4
PTPN18-214ENST00000490137 PEG3Q9GZU2 1588 aa12.56□□□□□ -0.4
PTPN18-214ENST00000490137 WDR62O43379 1518 aa12.53□□□□□ -0.4
PTPN18-214ENST00000490137 MRC2Q9UBG0 1479 aa12.52□□□□□ -0.41
PTPN18-214ENST00000490137 CADPSQ9ULU8 1353 aa12.44□□□□□ -0.42
PTPN18-214ENST00000490137 RIMBP3CA6NJZ7 1639 aa12.41□□□□□ -0.42
PTPN18-214ENST00000490137 RIMBP3BA6NNM3 1639 aa12.41□□□□□ -0.42
PTPN18-214ENST00000490137 RIMBP3Q9UFD9 1639 aa12.41□□□□□ -0.42
PTPN18-214ENST00000490137 CEP164Q9UPV0 1460 aa12.35□□□□□ -0.43
PTPN18-214ENST00000490137 ARHGEF11O15085 1522 aa12.33□□□□□ -0.44
PTPN18-214ENST00000490137 FANCD2Q9BXW9 1451 aa12.27□□□□□ -0.45
PTPN18-214ENST00000490137 MROH2BQ7Z745 1585 aa12.23□□□□□ -0.45
PTPN18-214ENST00000490137 TRHP20396 242 aaPredicted RBP12.22□□□□□ -0.45
PTPN18-214ENST00000490137 CFTRP13569 1480 aa12.21□□□□□ -0.46
PTPN18-214ENST00000490137 CYB5RLQ6IPT4 315 aa12.2□□□□□ -0.46
PTPN18-214ENST00000490137 URB2Q14146 1524 aaKnown RBP12.17□□□□□ -0.46
PTPN18-214ENST00000490137 RSF1Q96T23 1441 aaPredicted RBP12.17□□□□□ -0.46
PTPN18-214ENST00000490137 IFT140Q96RY7 1462 aa12.16□□□□□ -0.46
PTPN18-214ENST00000490137 ARAP1Q96P48 1450 aa12.14□□□□□ -0.47
PTPN18-214ENST00000490137 ZNF608Q9ULD9 1512 aaPredicted RBP12.07□□□□□ -0.48
PTPN18-214ENST00000490137 PRDM2Q13029 1718 aa12.07□□□□□ -0.48
PTPN18-214ENST00000490137 MAPK8IP2Q13387 824 aaPredicted RBP12.05□□□□□ -0.48
PTPN18-214ENST00000490137 ABCC8Q09428 1581 aa12.05□□□□□ -0.48
PTPN18-214ENST00000490137 WIZO95785 1651 aa12.04□□□□□ -0.48
PTPN18-214ENST00000490137 CHD1O14646 1710 aa12.04□□□□□ -0.48
PTPN18-214ENST00000490137 EIF4G3O43432 1585 aaKnown RBP12.04□□□□□ -0.48
PTPN18-214ENST00000490137 CACNB1Q02641 598 aaPredicted RBP12□□□□□ -0.49
PTPN18-214ENST00000490137 DMRT2Q9Y5R5 561 aa11.99□□□□□ -0.49
PTPN18-214ENST00000490137 TOPBP1Q92547 1522 aa11.97□□□□□ -0.49
PTPN18-214ENST00000490137 TOP2AP11388 1531 aaKnown RBP11.94□□□□□ -0.5
PTPN18-214ENST00000490137 CLASP1Q7Z460 1538 aa11.94□□□□□ -0.5
PTPN18-214ENST00000490137 TARBP1Q13395 1621 aaKnown RBP11.93□□□□□ -0.5
PTPN18-214ENST00000490137 WDR97A6NE52 1622 aa11.92□□□□□ -0.5
PTPN18-214ENST00000490137 DNMBPQ6XZF7 1577 aa11.92□□□□□ -0.5
PTPN18-214ENST00000490137 SYNJ1O43426 1573 aa11.91□□□□□ -0.5
PTPN18-214ENST00000490137 AQRO60306 1485 aaKnown RBP eCLIP11.89□□□□□ -0.51
PTPN18-214ENST00000490137 FBLN2P98095 1184 aa11.88□□□□□ -0.51
PTPN18-214ENST00000490137 MAGI1Q96QZ7 1491 aaPredicted RBP11.84□□□□□ -0.51
PTPN18-214ENST00000490137 ILDR1Q86SU0 546 aaPredicted RBP11.83□□□□□ -0.52
PTPN18-214ENST00000490137 GAPVD1Q14C86 1478 aa11.83□□□□□ -0.52
PTPN18-214ENST00000490137 POLA1P09884 1462 aaPredicted RBP11.82□□□□□ -0.52
PTPN18-214ENST00000490137 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
PTPN18-214ENST00000490137 SNAPC4Q5SXM2 1469 aa11.79□□□□□ -0.52
PTPN18-214ENST00000490137 SYNJ2O15056 1496 aa11.78□□□□□ -0.52
PTPN18-214ENST00000490137 SCAF1Q9H7N4 1312 aaKnown RBP11.77□□□□□ -0.53
PTPN18-214ENST00000490137 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
PTPN18-214ENST00000490137 SOGA1O94964 1423 aa11.75□□□□□ -0.53
PTPN18-214ENST00000490137 GRIN2BQ13224 1484 aa11.75□□□□□ -0.53
PTPN18-214ENST00000490137 HRCP23327 699 aa11.73□□□□□ -0.53
PTPN18-214ENST00000490137 TDRD9Q8NDG6 1382 aaKnown RBP11.73□□□□□ -0.53
PTPN18-214ENST00000490137 KIF13AQ9H1H9 1805 aa11.72□□□□□ -0.53
PTPN18-214ENST00000490137 SUPT5HO00267 1087 aaKnown RBP11.71□□□□□ -0.53
PTPN18-214ENST00000490137 RAD54L2Q9Y4B4 1467 aa11.7□□□□□ -0.54
PTPN18-214ENST00000490137 KDM4FA0A1W2PPD8 638 aa11.65□□□□□ -0.54
PTPN18-214ENST00000490137 FGD5Q6ZNL6 1462 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms