RNA–Protein interactions for RNA: ENST00000489937.5

FGF1-210, Transcript of fibroblast growth factor 1, humanhuman

TSL 3

Gene FGF1, Length 958 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGF1-210ENST00000489937 AEBP2Q6ZN18 517 aaPredicted RBP23.86■■□□□ 1.41
FGF1-210ENST00000489937 CHIC1Q5VXU3 224 aa23.53■■□□□ 1.36
FGF1-210ENST00000489937 NISCHQ9Y2I1 1504 aa23.27■■□□□ 1.32
FGF1-210ENST00000489937 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
FGF1-210ENST00000489937 CCDC180Q9P1Z9 1646 aa20.66■□□□□ 0.9
FGF1-210ENST00000489937 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
FGF1-210ENST00000489937 ABCC9O60706 1549 aa19.85■□□□□ 0.77
FGF1-210ENST00000489937 ZCCHC6Q5VYS8 1495 aaKnown RBP19.44■□□□□ 0.7
FGF1-210ENST00000489937 MYO15BQ96JP2 1530 aa19.4■□□□□ 0.7
FGF1-210ENST00000489937 NACADO15069 1562 aa19.36■□□□□ 0.69
FGF1-210ENST00000489937 DCAF1Q9Y4B6 1507 aa19.35■□□□□ 0.69
FGF1-210ENST00000489937 RB1CC1Q8TDY2 1594 aa19.31■□□□□ 0.68
FGF1-210ENST00000489937 PLPPR3Q6T4P5 718 aa19.21■□□□□ 0.67
FGF1-210ENST00000489937 DCAF8L2P0C7V8 631 aa19.18■□□□□ 0.66
FGF1-210ENST00000489937 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
FGF1-210ENST00000489937 SCRIBQ14160 1630 aa18.73■□□□□ 0.59
FGF1-210ENST00000489937 FOXD1Q16676 465 aa18.72■□□□□ 0.59
FGF1-210ENST00000489937 BICRAQ9NZM4 1560 aa18.68■□□□□ 0.58
FGF1-210ENST00000489937 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
FGF1-210ENST00000489937 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
FGF1-210ENST00000489937 ADRA2BP18089 450 aa18.21■□□□□ 0.51
FGF1-210ENST00000489937 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
FGF1-210ENST00000489937 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
FGF1-210ENST00000489937 BAZ1AQ9NRL2 1556 aaPredicted RBP18.04■□□□□ 0.48
FGF1-210ENST00000489937 CECR2Q9BXF3 1484 aa18.04■□□□□ 0.48
FGF1-210ENST00000489937 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.48
FGF1-210ENST00000489937 DNAJC5BQ9UF47 199 aa18.01■□□□□ 0.47
FGF1-210ENST00000489937 SMARCA4P51532 1647 aa18.01■□□□□ 0.47
FGF1-210ENST00000489937 MROH2BQ7Z745 1585 aa17.89■□□□□ 0.45
FGF1-210ENST00000489937 PEG3Q9GZU2 1588 aa17.89■□□□□ 0.45
FGF1-210ENST00000489937 SMARCA2P51531 1590 aa17.88■□□□□ 0.45
FGF1-210ENST00000489937 NCAPD3P42695 1498 aa17.85■□□□□ 0.45
FGF1-210ENST00000489937 ATAD2BQ9ULI0 1458 aa17.85■□□□□ 0.45
FGF1-210ENST00000489937 HMGXB3Q12766 1538 aa17.8■□□□□ 0.44
FGF1-210ENST00000489937 RSF1Q96T23 1441 aaPredicted RBP17.79■□□□□ 0.44
FGF1-210ENST00000489937 PIAS4Q8N2W9 510 aaPredicted RBP17.72■□□□□ 0.43
FGF1-210ENST00000489937 BAZ1BQ9UIG0 1483 aaKnown RBP17.7■□□□□ 0.42
FGF1-210ENST00000489937 WIZO95785 1651 aa17.69■□□□□ 0.42
FGF1-210ENST00000489937 TOP2AP11388 1531 aaKnown RBP17.58■□□□□ 0.41
FGF1-210ENST00000489937 SUPT5HO00267 1087 aaKnown RBP17.35■□□□□ 0.37
FGF1-210ENST00000489937 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
FGF1-210ENST00000489937 CCDC88BA6NC98 1476 aa17.33■□□□□ 0.37
FGF1-210ENST00000489937 CADPSQ9ULU8 1353 aa17.31■□□□□ 0.36
FGF1-210ENST00000489937 CFTRP13569 1480 aa17.27■□□□□ 0.36
FGF1-210ENST00000489937 NESP48681 1621 aa17.24■□□□□ 0.35
FGF1-210ENST00000489937 PDS5BQ9NTI5 1447 aa17.21■□□□□ 0.34
FGF1-210ENST00000489937 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
FGF1-210ENST00000489937 MSH5O43196 834 aa17.15■□□□□ 0.34
FGF1-210ENST00000489937 ERCC6Q03468 1493 aa17.12■□□□□ 0.33
FGF1-210ENST00000489937 FANCD2Q9BXW9 1451 aa17.09■□□□□ 0.33
FGF1-210ENST00000489937 KIF21AQ7Z4S6 1674 aa17.08■□□□□ 0.32
FGF1-210ENST00000489937 CEP164Q9UPV0 1460 aa17.06■□□□□ 0.32
FGF1-210ENST00000489937 THOC2Q8NI27 1593 aaKnown RBP17.01■□□□□ 0.31
FGF1-210ENST00000489937 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
FGF1-210ENST00000489937 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
FGF1-210ENST00000489937 CUX2O14529 1486 aa16.96■□□□□ 0.31
FGF1-210ENST00000489937 WDR62O43379 1518 aa16.96■□□□□ 0.3
FGF1-210ENST00000489937 ABCC8Q09428 1581 aa16.94■□□□□ 0.3
FGF1-210ENST00000489937 URB2Q14146 1524 aaKnown RBP16.89■□□□□ 0.29
FGF1-210ENST00000489937 KCNA4P22459 653 aa16.87■□□□□ 0.29
FGF1-210ENST00000489937 DNMBPQ6XZF7 1577 aa16.86■□□□□ 0.29
FGF1-210ENST00000489937 TOPBP1Q92547 1522 aa16.85■□□□□ 0.29
FGF1-210ENST00000489937 CUX1P39880 1505 aa16.78■□□□□ 0.28
FGF1-210ENST00000489937 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
FGF1-210ENST00000489937 TOP2BQ02880 1626 aa16.74■□□□□ 0.27
FGF1-210ENST00000489937 BIVM-ERCC5R4GMW8 1640 aa16.74■□□□□ 0.27
FGF1-210ENST00000489937 IFT140Q96RY7 1462 aa16.72■□□□□ 0.27
FGF1-210ENST00000489937 POLA1P09884 1462 aaPredicted RBP16.71■□□□□ 0.27
FGF1-210ENST00000489937 FGD5Q6ZNL6 1462 aa16.69■□□□□ 0.26
FGF1-210ENST00000489937 SYNJ1O43426 1573 aa16.68■□□□□ 0.26
FGF1-210ENST00000489937 TARBP1Q13395 1621 aaKnown RBP16.66■□□□□ 0.26
FGF1-210ENST00000489937 WDR97A6NE52 1622 aa16.64■□□□□ 0.25
FGF1-210ENST00000489937 SOGA1O94964 1423 aa16.63■□□□□ 0.25
FGF1-210ENST00000489937 SCAF1Q9H7N4 1312 aaKnown RBP16.63■□□□□ 0.25
FGF1-210ENST00000489937 ABCA10Q8WWZ4 1543 aa16.59■□□□□ 0.25
FGF1-210ENST00000489937 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
FGF1-210ENST00000489937 RAD54L2Q9Y4B4 1467 aa16.58■□□□□ 0.24
FGF1-210ENST00000489937 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
FGF1-210ENST00000489937 EIF4G3O43432 1585 aaKnown RBP16.53■□□□□ 0.24
FGF1-210ENST00000489937 ABCA5Q8WWZ7 1642 aa16.49■□□□□ 0.23
FGF1-210ENST00000489937 TDRD9Q8NDG6 1382 aaKnown RBP16.48■□□□□ 0.23
FGF1-210ENST00000489937 AQRO60306 1485 aaKnown RBP eCLIP16.48■□□□□ 0.23
FGF1-210ENST00000489937 GAPVD1Q14C86 1478 aa16.46■□□□□ 0.23
FGF1-210ENST00000489937 MAPK8IP2Q13387 824 aaPredicted RBP16.45■□□□□ 0.22
FGF1-210ENST00000489937 TRIM41Q8WV44 630 aa16.45■□□□□ 0.22
FGF1-210ENST00000489937 GRIN2BQ13224 1484 aa16.45■□□□□ 0.22
FGF1-210ENST00000489937 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
FGF1-210ENST00000489937 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
FGF1-210ENST00000489937 MAGI1Q96QZ7 1491 aaPredicted RBP16.42■□□□□ 0.22
FGF1-210ENST00000489937 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
FGF1-210ENST00000489937 PBRM1Q86U86 1689 aa16.41■□□□□ 0.22
FGF1-210ENST00000489937 SNAPC4Q5SXM2 1469 aa16.35■□□□□ 0.21
FGF1-210ENST00000489937 NPM3O75607 178 aaKnown RBP16.35■□□□□ 0.21
FGF1-210ENST00000489937 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
FGF1-210ENST00000489937 FHAD1B1AJZ9 1412 aa16.31■□□□□ 0.2
FGF1-210ENST00000489937 ADAMTS12P58397 1594 aa16.3■□□□□ 0.2
FGF1-210ENST00000489937 EEA1Q15075 1411 aa16.3■□□□□ 0.2
FGF1-210ENST00000489937 IGF1RP08069 1367 aa16.3■□□□□ 0.2
FGF1-210ENST00000489937 CUL7Q14999 1698 aa16.3■□□□□ 0.2
FGF1-210ENST00000489937 CHD1O14646 1710 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms