RNA–Protein interactions for RNA: ENST00000489814.5

TMCO4-206, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 2

Gene TMCO4, Length 1,722 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-206ENST00000489814 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
TMCO4-206ENST00000489814 CCDC180Q9P1Z9 1646 aa28.59■■■□□ 2.17
TMCO4-206ENST00000489814 ABCC9O60706 1549 aa27.49■■□□□ 1.99
TMCO4-206ENST00000489814 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
TMCO4-206ENST00000489814 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
TMCO4-206ENST00000489814 DCAF1Q9Y4B6 1507 aa27■■□□□ 1.91
TMCO4-206ENST00000489814 MYO15BQ96JP2 1530 aa26.79■■□□□ 1.88
TMCO4-206ENST00000489814 NACADO15069 1562 aa26.75■■□□□ 1.87
TMCO4-206ENST00000489814 RB1CC1Q8TDY2 1594 aa26.61■■□□□ 1.85
TMCO4-206ENST00000489814 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
TMCO4-206ENST00000489814 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
TMCO4-206ENST00000489814 UNC13AQ9UPW8 1703 aa26■■□□□ 1.75
TMCO4-206ENST00000489814 PABPN1Q86U42 306 aaKnown RBP eCLIP25.89■■□□□ 1.74
TMCO4-206ENST00000489814 BICRAQ9NZM4 1560 aa25.85■■□□□ 1.73
TMCO4-206ENST00000489814 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
TMCO4-206ENST00000489814 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
TMCO4-206ENST00000489814 MROH2BQ7Z745 1585 aa25.3■■□□□ 1.64
TMCO4-206ENST00000489814 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
TMCO4-206ENST00000489814 BAZ1AQ9NRL2 1556 aaPredicted RBP25.27■■□□□ 1.64
TMCO4-206ENST00000489814 SMARCA4P51532 1647 aa25.2■■□□□ 1.63
TMCO4-206ENST00000489814 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
TMCO4-206ENST00000489814 WIZO95785 1651 aa25.04■■□□□ 1.6
TMCO4-206ENST00000489814 ATAD2BQ9ULI0 1458 aa24.91■■□□□ 1.58
TMCO4-206ENST00000489814 PEG3Q9GZU2 1588 aa24.89■■□□□ 1.57
TMCO4-206ENST00000489814 SMARCA2P51531 1590 aa24.83■■□□□ 1.57
TMCO4-206ENST00000489814 CC2D2AQ9P2K1 1620 aa24.8■■□□□ 1.56
TMCO4-206ENST00000489814 TOP2AP11388 1531 aaKnown RBP24.77■■□□□ 1.56
TMCO4-206ENST00000489814 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
TMCO4-206ENST00000489814 NCAPD3P42695 1498 aa24.73■■□□□ 1.55
TMCO4-206ENST00000489814 HMGXB3Q12766 1538 aa24.64■■□□□ 1.53
TMCO4-206ENST00000489814 DNAJC5BQ9UF47 199 aa24.58■■□□□ 1.53
TMCO4-206ENST00000489814 CCDC88BA6NC98 1476 aa24.54■■□□□ 1.52
TMCO4-206ENST00000489814 CFTRP13569 1480 aa24.09■■□□□ 1.45
TMCO4-206ENST00000489814 CADPSQ9ULU8 1353 aa24.09■■□□□ 1.45
TMCO4-206ENST00000489814 CHIC1Q5VXU3 224 aa24.09■■□□□ 1.45
TMCO4-206ENST00000489814 NESP48681 1621 aa24.03■■□□□ 1.44
TMCO4-206ENST00000489814 ABCC8Q09428 1581 aa23.94■■□□□ 1.42
TMCO4-206ENST00000489814 LAMC3Q9Y6N6 1575 aa23.9■■□□□ 1.42
TMCO4-206ENST00000489814 PRDM2Q13029 1718 aa23.87■■□□□ 1.41
TMCO4-206ENST00000489814 TRIM41Q8WV44 630 aa23.84■■□□□ 1.41
TMCO4-206ENST00000489814 FANCD2Q9BXW9 1451 aa23.83■■□□□ 1.41
TMCO4-206ENST00000489814 WRNQ14191 1432 aaPredicted RBP eCLIP23.81■■□□□ 1.4
TMCO4-206ENST00000489814 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
TMCO4-206ENST00000489814 SYNJ1O43426 1573 aa23.72■■□□□ 1.39
TMCO4-206ENST00000489814 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.39
TMCO4-206ENST00000489814 CUX1P39880 1505 aa23.67■■□□□ 1.38
TMCO4-206ENST00000489814 KIF21AQ7Z4S6 1674 aa23.64■■□□□ 1.38
TMCO4-206ENST00000489814 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
TMCO4-206ENST00000489814 ERCC6Q03468 1493 aa23.57■■□□□ 1.36
TMCO4-206ENST00000489814 URB2Q14146 1524 aaKnown RBP23.56■■□□□ 1.36
TMCO4-206ENST00000489814 BIVM-ERCC5R4GMW8 1640 aa23.56■■□□□ 1.36
TMCO4-206ENST00000489814 TOPBP1Q92547 1522 aa23.53■■□□□ 1.36
TMCO4-206ENST00000489814 DNMBPQ6XZF7 1577 aa23.52■■□□□ 1.36
TMCO4-206ENST00000489814 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
TMCO4-206ENST00000489814 FGD5Q6ZNL6 1462 aa23.47■■□□□ 1.35
TMCO4-206ENST00000489814 FAM9AQ8IZU1 332 aaPredicted RBP23.46■■□□□ 1.35
TMCO4-206ENST00000489814 SOGA1O94964 1423 aa23.44■■□□□ 1.34
TMCO4-206ENST00000489814 POLA1P09884 1462 aaPredicted RBP23.4■■□□□ 1.34
TMCO4-206ENST00000489814 RUSC2Q8N2Y8 1516 aa23.38■■□□□ 1.33
TMCO4-206ENST00000489814 WDR62O43379 1518 aa23.37■■□□□ 1.33
TMCO4-206ENST00000489814 THOC2Q8NI27 1593 aaKnown RBP23.37■■□□□ 1.33
TMCO4-206ENST00000489814 RAD54L2Q9Y4B4 1467 aa23.35■■□□□ 1.33
TMCO4-206ENST00000489814 CUX2O14529 1486 aa23.26■■□□□ 1.31
TMCO4-206ENST00000489814 EEA1Q15075 1411 aa23.23■■□□□ 1.31
TMCO4-206ENST00000489814 ABCA10Q8WWZ4 1543 aa23.22■■□□□ 1.31
TMCO4-206ENST00000489814 KIF27Q86VH2 1401 aa23.21■■□□□ 1.31
TMCO4-206ENST00000489814 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
TMCO4-206ENST00000489814 LOC105371045A0A1W2PR82 267 aa23.19■■□□□ 1.3
TMCO4-206ENST00000489814 EHMT2Q96KQ7 1210 aa23.19■■□□□ 1.3
TMCO4-206ENST00000489814 TARBP1Q13395 1621 aaKnown RBP23.17■■□□□ 1.3
TMCO4-206ENST00000489814 TDRD9Q8NDG6 1382 aaKnown RBP23.16■■□□□ 1.3
TMCO4-206ENST00000489814 IFT140Q96RY7 1462 aa23.15■■□□□ 1.3
TMCO4-206ENST00000489814 WDR97A6NE52 1622 aa23.13■■□□□ 1.29
TMCO4-206ENST00000489814 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
TMCO4-206ENST00000489814 IGF1RP08069 1367 aa23.07■■□□□ 1.28
TMCO4-206ENST00000489814 AQRO60306 1485 aaKnown RBP eCLIP23.06■■□□□ 1.28
TMCO4-206ENST00000489814 ABCA5Q8WWZ7 1642 aa23.05■■□□□ 1.28
TMCO4-206ENST00000489814 GAPVD1Q14C86 1478 aa23.05■■□□□ 1.28
TMCO4-206ENST00000489814 PRXQ9BXM0 1461 aa22.99■■□□□ 1.27
TMCO4-206ENST00000489814 RAPGEF2Q9Y4G8 1499 aa22.96■■□□□ 1.27
TMCO4-206ENST00000489814 KIF21BO75037 1637 aa22.96■■□□□ 1.27
TMCO4-206ENST00000489814 EIF4G3O43432 1585 aaKnown RBP22.95■■□□□ 1.26
TMCO4-206ENST00000489814 CARMIL1Q5VZK9 1371 aa22.94■■□□□ 1.26
TMCO4-206ENST00000489814 GOLGA3Q08378 1498 aa22.94■■□□□ 1.26
TMCO4-206ENST00000489814 ERICH3Q5RHP9 1530 aa22.93■■□□□ 1.26
TMCO4-206ENST00000489814 GRIN2BQ13224 1484 aa22.91■■□□□ 1.26
TMCO4-206ENST00000489814 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
TMCO4-206ENST00000489814 PBRM1Q86U86 1689 aa22.88■■□□□ 1.25
TMCO4-206ENST00000489814 CUL7Q14999 1698 aa22.84■■□□□ 1.25
TMCO4-206ENST00000489814 SNAPC4Q5SXM2 1469 aa22.83■■□□□ 1.25
TMCO4-206ENST00000489814 ADAMTS12P58397 1594 aa22.8■■□□□ 1.24
TMCO4-206ENST00000489814 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
TMCO4-206ENST00000489814 FHAD1B1AJZ9 1412 aa22.79■■□□□ 1.24
TMCO4-206ENST00000489814 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
TMCO4-206ENST00000489814 RANGAP1P46060 587 aaPredicted RBP22.69■■□□□ 1.22
TMCO4-206ENST00000489814 CEP162Q5TB80 1403 aa22.68■■□□□ 1.22
TMCO4-206ENST00000489814 FBLN2P98095 1184 aa22.67■■□□□ 1.22
TMCO4-206ENST00000489814 SYNJ2O15056 1496 aa22.67■■□□□ 1.22
TMCO4-206ENST00000489814 CHMP7Q8WUX9 453 aaPredicted RBP22.65■■□□□ 1.22
TMCO4-206ENST00000489814 GRIN2AQ12879 1464 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms